Click here to switch to the map view.

The map label for this gene is 239617581

Identifier: 239617581

GI number: 239617581

Start: 1274515

End: 1276362

Strand: Direct

Name: 239617581

Synonym: Kole_1200

Alternate gene names: NA

Gene position: 1274515-1276362 (Clockwise)

Preceding gene: 239617580

Following gene: 239617582

Centisome position: 55.36

GC content: 40.53

Gene sequence:

>1848_bases
TTGATTATGAGAATAATAAAGAACGGAAATCTCATGGTTGTGAGCGATGACAATGGATTGATCGATGCCAGAAGTGATAT
AGCTGCGGGTCTGTACCTGGAAGACACTAGATTTATTTCGTCCCTTTATCTGGAAACGGATAAGAGATTGAGAAAACTCC
AACCAAGGTTTGGGAACAGCTTTATCATAAACCGCTATATTTTTCGTTCATCCCCGTTAGCATCTCATTACGATGTTTTC
CTGGAAGAAACTATGAAAGTTTCGGGGAATGGGTTAGATATTCGAATAGAGCTCACGAATTATTCAAATGGGACAGTGAA
TATAGAGCTAAATTATTTTCTGAAATGTGAGTATGAGGATATCTTTCTCGTGAGAGAAAAAATTGGACATTATCTCGAAT
CGTCAAAAAAAGAGGTTTATCAAGACGAATTCGAGGACAAAGGATTGGAGTACGAAGATGCAGCAGCGCATTATAGAGTT
CATAAAAAGCTTCCAGAGGGGCAGTATTCCCTCGAACCCAAAGACAAGTTAACTCTTGAAGGTCATATTCATCTGTATAA
AGAACTGAAGGGAGCAAATCTTTTCAAAGATATCCTTGAAGATAGGCCCCCAAAATTTCCTTTTGAAGAATTTAAAACCG
ACAATCCGCTGCTCAAAAAAACTATTAGTGATCTTAAAATGCTAATGCTTCCAACGAAGTATGGTGATTTCCCTGCTGCC
GGACTACCGTGGTTTGCAACAATATTTGGGAGGGACAGTTTGATTTTTGCCCTCCAGACGCTTGATTTCTTTCCTGAAAC
TGCAAAAACAGTTTTAGAAATCCTCAGTTTATTTCAGGCATCTTCTGAAGACAATTTTAAAGACGCCGTTCCGGGAAAAA
TTATTCACGAAGCGCGGCTAAATTATCTTTCTCTCAGTAACCTGATCCCCTTTGAACGGTATTACGGCACAATCGATGCG
ACGCTACTCTATTTGATTCTCGCCGGGGAATATCTTAAGGCAACAGGGGATCTGGGAACCATAAAAAATTTGCTTCCCAA
AATAGAAGCTGCCGAAAAATGGATTTACAACTACGGTGATGCCGATAATGACGGATACGTCGAATACATGCCGTCTTCAG
AAAAAGGGCTTCAAACCCAGGGGTGGAAAGATTCCAGAGATTCCGTAAGTTTCAAAACAGGGGAATTAGCCAAACCTCCA
ATAGCTTTTGTAGAAGTTCAAGGGTATCTATACATGGCTTATCATGCCCTTAGTTATATTTACGAACAGCTGGGGAAAAA
AGAAAGGGCGAAGACTCTTCTTGAAAGAGCCTGTGAGTTAAAAAAGCGATTTAACAATGATTTTTGGCTTGAAGAAGAGA
AATTCTTCGCAATAGCGTTAGACGGCGACAAAAAGAAGGTTGATTCCATAAGTTCGAACCCTGGTCAGTGCCTCTTTACG
GGGATAATCGATGACGACAAGGTAGATTACGTTGTGAAAAAACTTATGTCTAAAGAACTTTTCAGTGGCTGGGGAGTACG
TACTCTTTCAACGGAGATGAAAAGATATAACCCATTTTCCTATCACAATGGTAGTGTGTGGCCCCACGATAACTCCGTAA
TAATCATGGGACTCATGAAATACGGTTATCATGAGGAGGCTAAAAAAATCTCTACAGCTCTTTTGGAAGCGATGAGTAAG
TTTACCGACAACAGGTTGCCAGAGCTTTTTAGCGGACTTTCAAAGGAAGAAACAAAAGGAGATATTGTCGAATATCCCAC
CAGTTGTTCACCACAACTTTGGGCTATCGGTACTCTGTTCACCATAAACCAGGCCTTACGGCCAACAAAAGGGGAGGGTT
TTTTATGA

Upstream 100 bases:

>100_bases
AGTTGCGGATTCCATTGTTTCATATCTGGAAAAAGGAGAAAAAATATCGAAAGTTCTTGATGTCGAACTAATAATTAGAG
AATCTACGGAGGTTGATTAG

Downstream 100 bases:

>100_bases
AGAAACTTGTTAGTTTTCTGATGGTTCTAGCACTGACAGTTAGTGTACTGGCTGTTGTGAACATTAGAATCAGTGGCTGG
CCGGGCAATCCCATTGAAGA

Product: Amylo-alpha-16-glucosidase

Products: NA

Alternate protein names: Amylo-Alpha-1 6-Glucosidase; Glycogen Debranching; Glycogen Debranching Protein; Amylo-Alpha-1 6-Glucosidase Family; Glycogen Debranching Family Protein; LOW QUALITY PROTEIN Amylo-Alpha-1 6-Glucosidase; Neutral Invertase; Glycoside Transferase; Amylo-Alpha-1 6-Glucosidase Protein; Amylo-Alpha-1 6-Glucosidase Family Protein

Number of amino acids: Translated: 615; Mature: 615

Protein sequence:

>615_residues
MIMRIIKNGNLMVVSDDNGLIDARSDIAAGLYLEDTRFISSLYLETDKRLRKLQPRFGNSFIINRYIFRSSPLASHYDVF
LEETMKVSGNGLDIRIELTNYSNGTVNIELNYFLKCEYEDIFLVREKIGHYLESSKKEVYQDEFEDKGLEYEDAAAHYRV
HKKLPEGQYSLEPKDKLTLEGHIHLYKELKGANLFKDILEDRPPKFPFEEFKTDNPLLKKTISDLKMLMLPTKYGDFPAA
GLPWFATIFGRDSLIFALQTLDFFPETAKTVLEILSLFQASSEDNFKDAVPGKIIHEARLNYLSLSNLIPFERYYGTIDA
TLLYLILAGEYLKATGDLGTIKNLLPKIEAAEKWIYNYGDADNDGYVEYMPSSEKGLQTQGWKDSRDSVSFKTGELAKPP
IAFVEVQGYLYMAYHALSYIYEQLGKKERAKTLLERACELKKRFNNDFWLEEEKFFAIALDGDKKKVDSISSNPGQCLFT
GIIDDDKVDYVVKKLMSKELFSGWGVRTLSTEMKRYNPFSYHNGSVWPHDNSVIIMGLMKYGYHEEAKKISTALLEAMSK
FTDNRLPELFSGLSKEETKGDIVEYPTSCSPQLWAIGTLFTINQALRPTKGEGFL

Sequences:

>Translated_615_residues
MIMRIIKNGNLMVVSDDNGLIDARSDIAAGLYLEDTRFISSLYLETDKRLRKLQPRFGNSFIINRYIFRSSPLASHYDVF
LEETMKVSGNGLDIRIELTNYSNGTVNIELNYFLKCEYEDIFLVREKIGHYLESSKKEVYQDEFEDKGLEYEDAAAHYRV
HKKLPEGQYSLEPKDKLTLEGHIHLYKELKGANLFKDILEDRPPKFPFEEFKTDNPLLKKTISDLKMLMLPTKYGDFPAA
GLPWFATIFGRDSLIFALQTLDFFPETAKTVLEILSLFQASSEDNFKDAVPGKIIHEARLNYLSLSNLIPFERYYGTIDA
TLLYLILAGEYLKATGDLGTIKNLLPKIEAAEKWIYNYGDADNDGYVEYMPSSEKGLQTQGWKDSRDSVSFKTGELAKPP
IAFVEVQGYLYMAYHALSYIYEQLGKKERAKTLLERACELKKRFNNDFWLEEEKFFAIALDGDKKKVDSISSNPGQCLFT
GIIDDDKVDYVVKKLMSKELFSGWGVRTLSTEMKRYNPFSYHNGSVWPHDNSVIIMGLMKYGYHEEAKKISTALLEAMSK
FTDNRLPELFSGLSKEETKGDIVEYPTSCSPQLWAIGTLFTINQALRPTKGEGFL
>Mature_615_residues
MIMRIIKNGNLMVVSDDNGLIDARSDIAAGLYLEDTRFISSLYLETDKRLRKLQPRFGNSFIINRYIFRSSPLASHYDVF
LEETMKVSGNGLDIRIELTNYSNGTVNIELNYFLKCEYEDIFLVREKIGHYLESSKKEVYQDEFEDKGLEYEDAAAHYRV
HKKLPEGQYSLEPKDKLTLEGHIHLYKELKGANLFKDILEDRPPKFPFEEFKTDNPLLKKTISDLKMLMLPTKYGDFPAA
GLPWFATIFGRDSLIFALQTLDFFPETAKTVLEILSLFQASSEDNFKDAVPGKIIHEARLNYLSLSNLIPFERYYGTIDA
TLLYLILAGEYLKATGDLGTIKNLLPKIEAAEKWIYNYGDADNDGYVEYMPSSEKGLQTQGWKDSRDSVSFKTGELAKPP
IAFVEVQGYLYMAYHALSYIYEQLGKKERAKTLLERACELKKRFNNDFWLEEEKFFAIALDGDKKKVDSISSNPGQCLFT
GIIDDDKVDYVVKKLMSKELFSGWGVRTLSTEMKRYNPFSYHNGSVWPHDNSVIIMGLMKYGYHEEAKKISTALLEAMSK
FTDNRLPELFSGLSKEETKGDIVEYPTSCSPQLWAIGTLFTINQALRPTKGEGFL

Specific function: Unknown

COG id: COG3408

COG function: function code G; Glycogen debranching enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70476; Mature: 70476

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMRIIKNGNLMVVSDDNGLIDARSDIAAGLYLEDTRFISSLYLETDKRLRKLQPRFGNS
CEEEEEECCCEEEEECCCCCEECCHHHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCE
FIINRYIFRSSPLASHYDVFLEETMKVSGNGLDIRIELTNYSNGTVNIELNYFLKCEYED
EEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEEEEEEECCCH
IFLVREKIGHYLESSKKEVYQDEFEDKGLEYEDAAAHYRVHKKLPEGQYSLEPKDKLTLE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEE
GHIHLYKELKGANLFKDILEDRPPKFPFEEFKTDNPLLKKTISDLKMLMLPTKYGDFPAA
CCEEEEHHHCCCHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
GLPWFATIFGRDSLIFALQTLDFFPETAKTVLEILSLFQASSEDNFKDAVPGKIIHEARL
CCCHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
NYLSLSNLIPFERYYGTIDATLLYLILAGEYLKATGDLGTIKNLLPKIEAAEKWIYNYGD
CHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC
ADNDGYVEYMPSSEKGLQTQGWKDSRDSVSFKTGELAKPPIAFVEVQGYLYMAYHALSYI
CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHH
YEQLGKKERAKTLLERACELKKRFNNDFWLEEEKFFAIALDGDKKKVDSISSNPGQCLFT
HHHHCCHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEEEECCCHHHHHCCCCCCCCEEEE
GIIDDDKVDYVVKKLMSKELFSGWGVRTLSTEMKRYNPFSYHNGSVWPHDNSVIIMGLMK
ECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEHH
YGYHEEAKKISTALLEAMSKFTDNRLPELFSGLSKEETKGDIVEYPTSCSPQLWAIGTLF
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCEEECCCCCCCCCEEHHHHH
TINQALRPTKGEGFL
HHHHHCCCCCCCCCC
>Mature Secondary Structure
MIMRIIKNGNLMVVSDDNGLIDARSDIAAGLYLEDTRFISSLYLETDKRLRKLQPRFGNS
CEEEEEECCCEEEEECCCCCEECCHHHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCE
FIINRYIFRSSPLASHYDVFLEETMKVSGNGLDIRIELTNYSNGTVNIELNYFLKCEYED
EEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEEEEEEECCCH
IFLVREKIGHYLESSKKEVYQDEFEDKGLEYEDAAAHYRVHKKLPEGQYSLEPKDKLTLE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEE
GHIHLYKELKGANLFKDILEDRPPKFPFEEFKTDNPLLKKTISDLKMLMLPTKYGDFPAA
CCEEEEHHHCCCHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
GLPWFATIFGRDSLIFALQTLDFFPETAKTVLEILSLFQASSEDNFKDAVPGKIIHEARL
CCCHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
NYLSLSNLIPFERYYGTIDATLLYLILAGEYLKATGDLGTIKNLLPKIEAAEKWIYNYGD
CHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC
ADNDGYVEYMPSSEKGLQTQGWKDSRDSVSFKTGELAKPPIAFVEVQGYLYMAYHALSYI
CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHH
YEQLGKKERAKTLLERACELKKRFNNDFWLEEEKFFAIALDGDKKKVDSISSNPGQCLFT
HHHHCCHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEEEECCCHHHHHCCCCCCCCEEEE
GIIDDDKVDYVVKKLMSKELFSGWGVRTLSTEMKRYNPFSYHNGSVWPHDNSVIIMGLMK
ECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEHH
YGYHEEAKKISTALLEAMSKFTDNRLPELFSGLSKEETKGDIVEYPTSCSPQLWAIGTLF
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCEEECCCCCCCCCEEHHHHH
TINQALRPTKGEGFL
HHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA