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The map label for this gene is ycjP [C]

Identifier: 239617555

GI number: 239617555

Start: 1241910

End: 1242740

Strand: Direct

Name: ycjP [C]

Synonym: Kole_1173

Alternate gene names: 239617555

Gene position: 1241910-1242740 (Clockwise)

Preceding gene: 239617554

Following gene: 239617556

Centisome position: 53.95

GC content: 38.51

Gene sequence:

>831_bases
ATGAAGCGTAGAAAACTCAATCAGTTGCTTTTACTTATAACGGTGATGGTGATAGTAATTTATATGTTTTTTCCCTTTTA
CTGGCTTTTTATATCCTCTCTTAAAGGAGACATGGAGCTTTACAAGATGCCTCCTAATTGGATAGTTAAAGAACCACAAT
GGGAGAATTACAAAGCTATTTTCACTGTTCAAAAGTTAGGAAGGAATCTCATGAACTCTTTTATTGTTGCTTTGAGCACG
ACCCTGGTGAGTCTTGCGATTGGAGCAAGTTCAGCGTATGCTCTTGCAAAATTCAGGATGAAATTCAAGAATCTCATTTT
ATCTATTATATTATCGGTTTCTATGTTTCCTGGAATCGTTGTTGTATCCCCCCTTTATATCATGTTTAAAGAAGCAAAAT
TAATAAACACTTATTGGGCACTAATTCTTCCTTACCTTACTTTTTCTCTCCCTTTAACCATCTGGATTTTAACAACCTTT
TTCAGGCAAATTCCAGATGAATTGGTTGAGGCTGCTGCTATTGATGGTGCTAGACCTTTTACCACATTTACAAAGGTAAT
TGCACCACTGGCGGCACCGGGCGTTTTTACCGCTGCAATATTAACTTTTATAGGAGCCTGGAATGAGCTGTTATTTGCGA
AAATATTCGTAACCTCTGCTGACAAATTCACTGTTCCCGTTGCTTTAACACTATTTCAAGGTCAGTATACCTCTTCCTGG
CAGCTCATTGCGGCCGCTGCGGTGGTAATAACTCTTCCTTTAATAATAATGGTCCTTTTCCTTCAAAGGTGGATAATTGC
CGGGCTTACTGCTGGAGCTATCAAAGATTGA

Upstream 100 bases:

>100_bases
TCGGCTATCGCCATCGTGTTATTCGCCTTCACGATGCTTATAGCCTTTTTCTTCATAAAGATTCTTGGGGCAAATCCATA
TTCTTCAGGGAAGTGATTGA

Downstream 100 bases:

>100_bases
TAAATTCTCATCGGAAGGAGAGATCATTTTGAAAGAACCATGGTGGAAAGGTGCAGTAATTTATCAAGTTTATCCACGTA
GTTTTAAGGACAGTAACAAT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MKRRKLNQLLLLITVMVIVIYMFFPFYWLFISSLKGDMELYKMPPNWIVKEPQWENYKAIFTVQKLGRNLMNSFIVALST
TLVSLAIGASSAYALAKFRMKFKNLILSIILSVSMFPGIVVVSPLYIMFKEAKLINTYWALILPYLTFSLPLTIWILTTF
FRQIPDELVEAAAIDGARPFTTFTKVIAPLAAPGVFTAAILTFIGAWNELLFAKIFVTSADKFTVPVALTLFQGQYTSSW
QLIAAAAVVITLPLIIMVLFLQRWIIAGLTAGAIKD

Sequences:

>Translated_276_residues
MKRRKLNQLLLLITVMVIVIYMFFPFYWLFISSLKGDMELYKMPPNWIVKEPQWENYKAIFTVQKLGRNLMNSFIVALST
TLVSLAIGASSAYALAKFRMKFKNLILSIILSVSMFPGIVVVSPLYIMFKEAKLINTYWALILPYLTFSLPLTIWILTTF
FRQIPDELVEAAAIDGARPFTTFTKVIAPLAAPGVFTAAILTFIGAWNELLFAKIFVTSADKFTVPVALTLFQGQYTSSW
QLIAAAAVVITLPLIIMVLFLQRWIIAGLTAGAIKD
>Mature_276_residues
MKRRKLNQLLLLITVMVIVIYMFFPFYWLFISSLKGDMELYKMPPNWIVKEPQWENYKAIFTVQKLGRNLMNSFIVALST
TLVSLAIGASSAYALAKFRMKFKNLILSIILSVSMFPGIVVVSPLYIMFKEAKLINTYWALILPYLTFSLPLTIWILTTF
FRQIPDELVEAAAIDGARPFTTFTKVIAPLAAPGVFTAAILTFIGAWNELLFAKIFVTSADKFTVPVALTLFQGQYTSSW
QLIAAAAVVITLPLIIMVLFLQRWIIAGLTAGAIKD

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=276, Percent_Identity=32.2463768115942, Blast_Score=140, Evalue=8e-35,
Organism=Escherichia coli, GI1790464, Length=213, Percent_Identity=33.3333333333333, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1789860, Length=255, Percent_Identity=29.4117647058824, Blast_Score=107, Evalue=6e-25,
Organism=Escherichia coli, GI1787368, Length=174, Percent_Identity=26.4367816091954, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31085; Mature: 31085

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRKLNQLLLLITVMVIVIYMFFPFYWLFISSLKGDMELYKMPPNWIVKEPQWENYKAI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCCCCCCCCCHHHH
FTVQKLGRNLMNSFIVALSTTLVSLAIGASSAYALAKFRMKFKNLILSIILSVSMFPGIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
VVSPLYIMFKEAKLINTYWALILPYLTFSLPLTIWILTTFFRQIPDELVEAAAIDGARPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
TTFTKVIAPLAAPGVFTAAILTFIGAWNELLFAKIFVTSADKFTVPVALTLFQGQYTSSW
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHEEECCCCCCCH
QLIAAAAVVITLPLIIMVLFLQRWIIAGLTAGAIKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKRRKLNQLLLLITVMVIVIYMFFPFYWLFISSLKGDMELYKMPPNWIVKEPQWENYKAI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCCCCCCCCCHHHH
FTVQKLGRNLMNSFIVALSTTLVSLAIGASSAYALAKFRMKFKNLILSIILSVSMFPGIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
VVSPLYIMFKEAKLINTYWALILPYLTFSLPLTIWILTTFFRQIPDELVEAAAIDGARPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
TTFTKVIAPLAAPGVFTAAILTFIGAWNELLFAKIFVTSADKFTVPVALTLFQGQYTSSW
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHEEECCCCCCCH
QLIAAAAVVITLPLIIMVLFLQRWIIAGLTAGAIKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]