Definition Kosmotoga olearia TBF 19.5.1, complete genome.
Accession NC_012785
Length 2,302,126

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The map label for this gene is yvdM [H]

Identifier: 239617427

GI number: 239617427

Start: 1106211

End: 1106876

Strand: Reverse

Name: yvdM [H]

Synonym: Kole_1039

Alternate gene names: 239617427

Gene position: 1106876-1106211 (Counterclockwise)

Preceding gene: 239617428

Following gene: 239617426

Centisome position: 48.08

GC content: 38.29

Gene sequence:

>666_bases
GTGAGCTTTTCTGTCTGTATTTTTGATATGGATGGAGTAATTGTTGATACTGCTAGGTATCACTTTCTAGCATGGAAAAA
GCTTGCTGGAGAGCTGGGCTTTGAACTATCTCCTGAGCTTGGTGAACAGCTCAAAGGAATTGGACGTCTTGAAGCTTTGA
ATATAGTTTTGAAGTTTGGTAGTATCAAAGCAAATGAAAAAGATAAGCAGAAACTTGCCAAACGTAAAAACAATTATTAT
TTAGAGTTTATCTCGAAAATAGATGAATCTGAAGTGCTTCCCGGCGTGATCACGTTTTTGAAAACCTTAAGAGAAGCAAA
ACTGAAAACAGCACTTGCAACAGTAAGCAAGAATGCATCTGTGATAATTGAAAAAACTGGTATAGAAAAACTATTTGATG
TCATAGTTGACGGAAATATGATTAAAAATGGAAAACCCGATCCTGAAGTTTTCTTAAAAGCTGCAGAGATGCTGGAAGTA
TCACCACAAGAGTGCATAGTTTTTGAGGACGCAGTAGCAGGTATTGAGGCCGCTCACAGAGCTGGTATGAAGTGCATAGG
AATTGGAAATCCATCTGTCCTCAGTAAAGCGGACTTCGTTATAAGAAATCTCAAAGAGATAAATCTTGGTGTGTTGGAAA
AGGTTCCCTCCAAAGGGGCTTTTTAG

Upstream 100 bases:

>100_bases
AGAATTCTATCAGGAAAAAAGGCAAAACAGAAAAATATACTTCTATCCACAGAACTCATCGTTCGGGAAAGCGCTTGAAT
GTCACGGATGGTGTTTGCCA

Downstream 100 bases:

>100_bases
TTCATACATGAGAGGAGTGAGTGTTGTGAGGAAAGGCTTGTTGTTGGCTTTAGTGCTGGTTGTTCTTGCCGTTGCGGTTC
TCGGTGAAGTTACTTTGCAG

Product: beta-phosphoglucomutase

Products: NA

Alternate protein names: Beta-PGM [H]

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MSFSVCIFDMDGVIVDTARYHFLAWKKLAGELGFELSPELGEQLKGIGRLEALNIVLKFGSIKANEKDKQKLAKRKNNYY
LEFISKIDESEVLPGVITFLKTLREAKLKTALATVSKNASVIIEKTGIEKLFDVIVDGNMIKNGKPDPEVFLKAAEMLEV
SPQECIVFEDAVAGIEAAHRAGMKCIGIGNPSVLSKADFVIRNLKEINLGVLEKVPSKGAF

Sequences:

>Translated_221_residues
MSFSVCIFDMDGVIVDTARYHFLAWKKLAGELGFELSPELGEQLKGIGRLEALNIVLKFGSIKANEKDKQKLAKRKNNYY
LEFISKIDESEVLPGVITFLKTLREAKLKTALATVSKNASVIIEKTGIEKLFDVIVDGNMIKNGKPDPEVFLKAAEMLEV
SPQECIVFEDAVAGIEAAHRAGMKCIGIGNPSVLSKADFVIRNLKEINLGVLEKVPSKGAF
>Mature_220_residues
SFSVCIFDMDGVIVDTARYHFLAWKKLAGELGFELSPELGEQLKGIGRLEALNIVLKFGSIKANEKDKQKLAKRKNNYYL
EFISKIDESEVLPGVITFLKTLREAKLKTALATVSKNASVIIEKTGIEKLFDVIVDGNMIKNGKPDPEVFLKAAEMLEVS
PQECIVFEDAVAGIEAAHRAGMKCIGIGNPSVLSKADFVIRNLKEINLGVLEKVPSKGAF

Specific function: Reversible transformation of glucose 6-phosphate and beta-glucose 1-phosphate [H]

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Homo sapiens, GI197382691, Length=217, Percent_Identity=29.4930875576037, Blast_Score=84, Evalue=7e-17,
Organism=Homo sapiens, GI207113149, Length=240, Percent_Identity=26.6666666666667, Blast_Score=72, Evalue=5e-13,
Organism=Escherichia coli, GI1787576, Length=191, Percent_Identity=41.3612565445026, Blast_Score=160, Evalue=9e-41,
Organism=Escherichia coli, GI1789046, Length=188, Percent_Identity=29.2553191489362, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI87082080, Length=210, Percent_Identity=30.4761904761905, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1788021, Length=202, Percent_Identity=26.2376237623762, Blast_Score=67, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6321833, Length=237, Percent_Identity=29.535864978903, Blast_Score=68, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6321834, Length=235, Percent_Identity=29.3617021276596, Blast_Score=67, Evalue=2e-12,
Organism=Drosophila melanogaster, GI17137324, Length=197, Percent_Identity=29.4416243654822, Blast_Score=81, Evalue=7e-16,
Organism=Drosophila melanogaster, GI116008157, Length=197, Percent_Identity=29.4416243654822, Blast_Score=74, Evalue=6e-14,
Organism=Drosophila melanogaster, GI45550911, Length=200, Percent_Identity=27, Blast_Score=74, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010976
- InterPro:   IPR010972
- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006402 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: =5.4.2.6 [H]

Molecular weight: Translated: 24289; Mature: 24158

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFSVCIFDMDGVIVDTARYHFLAWKKLAGELGFELSPELGEQLKGIGRLEALNIVLKFG
CCEEEEEEECCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHEEC
SIKANEKDKQKLAKRKNNYYLEFISKIDESEVLPGVITFLKTLREAKLKTALATVSKNAS
CCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCE
VIIEKTGIEKLFDVIVDGNMIKNGKPDPEVFLKAAEMLEVSPQECIVFEDAVAGIEAAHR
EEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHEEEHHHHHHHHHHHH
AGMKCIGIGNPSVLSKADFVIRNLKEINLGVLEKVPSKGAF
CCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCC
>Mature Secondary Structure 
SFSVCIFDMDGVIVDTARYHFLAWKKLAGELGFELSPELGEQLKGIGRLEALNIVLKFG
CEEEEEEECCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHEEC
SIKANEKDKQKLAKRKNNYYLEFISKIDESEVLPGVITFLKTLREAKLKTALATVSKNAS
CCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCE
VIIEKTGIEKLFDVIVDGNMIKNGKPDPEVFLKAAEMLEVSPQECIVFEDAVAGIEAAHR
EEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHEEEHHHHHHHHHHHH
AGMKCIGIGNPSVLSKADFVIRNLKEINLGVLEKVPSKGAF
CCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]