| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is yvdM [H]
Identifier: 239617427
GI number: 239617427
Start: 1106211
End: 1106876
Strand: Reverse
Name: yvdM [H]
Synonym: Kole_1039
Alternate gene names: 239617427
Gene position: 1106876-1106211 (Counterclockwise)
Preceding gene: 239617428
Following gene: 239617426
Centisome position: 48.08
GC content: 38.29
Gene sequence:
>666_bases GTGAGCTTTTCTGTCTGTATTTTTGATATGGATGGAGTAATTGTTGATACTGCTAGGTATCACTTTCTAGCATGGAAAAA GCTTGCTGGAGAGCTGGGCTTTGAACTATCTCCTGAGCTTGGTGAACAGCTCAAAGGAATTGGACGTCTTGAAGCTTTGA ATATAGTTTTGAAGTTTGGTAGTATCAAAGCAAATGAAAAAGATAAGCAGAAACTTGCCAAACGTAAAAACAATTATTAT TTAGAGTTTATCTCGAAAATAGATGAATCTGAAGTGCTTCCCGGCGTGATCACGTTTTTGAAAACCTTAAGAGAAGCAAA ACTGAAAACAGCACTTGCAACAGTAAGCAAGAATGCATCTGTGATAATTGAAAAAACTGGTATAGAAAAACTATTTGATG TCATAGTTGACGGAAATATGATTAAAAATGGAAAACCCGATCCTGAAGTTTTCTTAAAAGCTGCAGAGATGCTGGAAGTA TCACCACAAGAGTGCATAGTTTTTGAGGACGCAGTAGCAGGTATTGAGGCCGCTCACAGAGCTGGTATGAAGTGCATAGG AATTGGAAATCCATCTGTCCTCAGTAAAGCGGACTTCGTTATAAGAAATCTCAAAGAGATAAATCTTGGTGTGTTGGAAA AGGTTCCCTCCAAAGGGGCTTTTTAG
Upstream 100 bases:
>100_bases AGAATTCTATCAGGAAAAAAGGCAAAACAGAAAAATATACTTCTATCCACAGAACTCATCGTTCGGGAAAGCGCTTGAAT GTCACGGATGGTGTTTGCCA
Downstream 100 bases:
>100_bases TTCATACATGAGAGGAGTGAGTGTTGTGAGGAAAGGCTTGTTGTTGGCTTTAGTGCTGGTTGTTCTTGCCGTTGCGGTTC TCGGTGAAGTTACTTTGCAG
Product: beta-phosphoglucomutase
Products: NA
Alternate protein names: Beta-PGM [H]
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MSFSVCIFDMDGVIVDTARYHFLAWKKLAGELGFELSPELGEQLKGIGRLEALNIVLKFGSIKANEKDKQKLAKRKNNYY LEFISKIDESEVLPGVITFLKTLREAKLKTALATVSKNASVIIEKTGIEKLFDVIVDGNMIKNGKPDPEVFLKAAEMLEV SPQECIVFEDAVAGIEAAHRAGMKCIGIGNPSVLSKADFVIRNLKEINLGVLEKVPSKGAF
Sequences:
>Translated_221_residues MSFSVCIFDMDGVIVDTARYHFLAWKKLAGELGFELSPELGEQLKGIGRLEALNIVLKFGSIKANEKDKQKLAKRKNNYY LEFISKIDESEVLPGVITFLKTLREAKLKTALATVSKNASVIIEKTGIEKLFDVIVDGNMIKNGKPDPEVFLKAAEMLEV SPQECIVFEDAVAGIEAAHRAGMKCIGIGNPSVLSKADFVIRNLKEINLGVLEKVPSKGAF >Mature_220_residues SFSVCIFDMDGVIVDTARYHFLAWKKLAGELGFELSPELGEQLKGIGRLEALNIVLKFGSIKANEKDKQKLAKRKNNYYL EFISKIDESEVLPGVITFLKTLREAKLKTALATVSKNASVIIEKTGIEKLFDVIVDGNMIKNGKPDPEVFLKAAEMLEVS PQECIVFEDAVAGIEAAHRAGMKCIGIGNPSVLSKADFVIRNLKEINLGVLEKVPSKGAF
Specific function: Reversible transformation of glucose 6-phosphate and beta-glucose 1-phosphate [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Homo sapiens, GI197382691, Length=217, Percent_Identity=29.4930875576037, Blast_Score=84, Evalue=7e-17, Organism=Homo sapiens, GI207113149, Length=240, Percent_Identity=26.6666666666667, Blast_Score=72, Evalue=5e-13, Organism=Escherichia coli, GI1787576, Length=191, Percent_Identity=41.3612565445026, Blast_Score=160, Evalue=9e-41, Organism=Escherichia coli, GI1789046, Length=188, Percent_Identity=29.2553191489362, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI87082080, Length=210, Percent_Identity=30.4761904761905, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1788021, Length=202, Percent_Identity=26.2376237623762, Blast_Score=67, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6321833, Length=237, Percent_Identity=29.535864978903, Blast_Score=68, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6321834, Length=235, Percent_Identity=29.3617021276596, Blast_Score=67, Evalue=2e-12, Organism=Drosophila melanogaster, GI17137324, Length=197, Percent_Identity=29.4416243654822, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI116008157, Length=197, Percent_Identity=29.4416243654822, Blast_Score=74, Evalue=6e-14, Organism=Drosophila melanogaster, GI45550911, Length=200, Percent_Identity=27, Blast_Score=74, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010976 - InterPro: IPR010972 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006402 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =5.4.2.6 [H]
Molecular weight: Translated: 24289; Mature: 24158
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFSVCIFDMDGVIVDTARYHFLAWKKLAGELGFELSPELGEQLKGIGRLEALNIVLKFG CCEEEEEEECCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHEEC SIKANEKDKQKLAKRKNNYYLEFISKIDESEVLPGVITFLKTLREAKLKTALATVSKNAS CCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCE VIIEKTGIEKLFDVIVDGNMIKNGKPDPEVFLKAAEMLEVSPQECIVFEDAVAGIEAAHR EEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHEEEHHHHHHHHHHHH AGMKCIGIGNPSVLSKADFVIRNLKEINLGVLEKVPSKGAF CCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCC >Mature Secondary Structure SFSVCIFDMDGVIVDTARYHFLAWKKLAGELGFELSPELGEQLKGIGRLEALNIVLKFG CEEEEEEECCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHEEC SIKANEKDKQKLAKRKNNYYLEFISKIDESEVLPGVITFLKTLREAKLKTALATVSKNAS CCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCE VIIEKTGIEKLFDVIVDGNMIKNGKPDPEVFLKAAEMLEVSPQECIVFEDAVAGIEAAHR EEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHEEEHHHHHHHHHHHH AGMKCIGIGNPSVLSKADFVIRNLKEINLGVLEKVPSKGAF CCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]