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The map label for this gene is ganQ [H]

Identifier: 239617374

GI number: 239617374

Start: 1038744

End: 1039619

Strand: Reverse

Name: ganQ [H]

Synonym: Kole_0984

Alternate gene names: 239617374

Gene position: 1039619-1038744 (Counterclockwise)

Preceding gene: 239617375

Following gene: 239617373

Centisome position: 45.16

GC content: 41.21

Gene sequence:

>876_bases
ATGATGGAAAAAACGACAGGAAGAACATATAAAATCACCTTTTTTCAAAGAAAGAAAGAGAAAATTGCAAGCCTGGTAAT
CTACACCATTCTAATCGTTGTAAGTCTCCCAATTGTTCTCGGATACCTTTGGCTTTTCTTGAGTTCTTTTTCTGAAAATA
TGAAGTACGGAATCATTCCCACAAAGTTAACCCTTCACAACTGGAGATTTCTCTGGGAGTCAATCGCTGGCTATCCAAAT
ATATGGCATATCACACTCAACACGCTTATCGTAGCTTTAATGGTCATGTTCCTGGAATTATTCATCACAAGCTTCGCTGG
TTATGCTCTTTCACGTTTCAAATTCAAAGGTAGACGAACGATGCTGATGGGGATACTGGTTCTTCATTCTTTCCCATCCG
TGTCACTTCTGGTAGCTATTTACTACGTTCTTAAGGTTTTAGGACTCATTAACAACCTGTGGGGAGTAATATTACTAAAG
GCAGCACTGGAAATCCCATGGGGGGCCTGGATCATGAAAGGCTTTTACGATCAACTGCCCTGGGAACTTGAATGGGCTGG
GGTAGTGGACGGTTATTCTCGAATCCAGGTTTTCTTCAAAGTCATTCTTCCTCTGGTAAAACCCGGTCTTGCCGTGACCG
CGATTTTTGGGTTCCTCTCCGGTTGGGGAGAATTCATCTTTATCAACACTTTCATTCTCGACCAACAAACCTGGACATTA
TCAAGGCTAATTAAAGGTGTAATCGGAGACTTCAGGTTTGTCGACTATGGTCTTCTTACAGCAGTATCTTTGTTTTACAT
GCTCCCAACACTCGTATTCTACCTCTTTACGAATAAATACCTGTTAGAAGTCAATATAACCGGTACGAAAGGATAA

Upstream 100 bases:

>100_bases
CATTAGTACTGGTAGTAATTGGTCTGGTAGCTTCTCTGGTGTATTTGAAAATATTCAGATTCAAGGAAATGATTCAAGAA
CCACGGATAGAGGTTGATGC

Downstream 100 bases:

>100_bases
AGATAAGGAGTGAGTTTATGGCACGTATCGTTCTTAAAGATCTCCACAAACATTTTGGAAAAGTTAGAGCTGTTGATGGA
ATAAACCTTGATGTTGAAGA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MMEKTTGRTYKITFFQRKKEKIASLVIYTILIVVSLPIVLGYLWLFLSSFSENMKYGIIPTKLTLHNWRFLWESIAGYPN
IWHITLNTLIVALMVMFLELFITSFAGYALSRFKFKGRRTMLMGILVLHSFPSVSLLVAIYYVLKVLGLINNLWGVILLK
AALEIPWGAWIMKGFYDQLPWELEWAGVVDGYSRIQVFFKVILPLVKPGLAVTAIFGFLSGWGEFIFINTFILDQQTWTL
SRLIKGVIGDFRFVDYGLLTAVSLFYMLPTLVFYLFTNKYLLEVNITGTKG

Sequences:

>Translated_291_residues
MMEKTTGRTYKITFFQRKKEKIASLVIYTILIVVSLPIVLGYLWLFLSSFSENMKYGIIPTKLTLHNWRFLWESIAGYPN
IWHITLNTLIVALMVMFLELFITSFAGYALSRFKFKGRRTMLMGILVLHSFPSVSLLVAIYYVLKVLGLINNLWGVILLK
AALEIPWGAWIMKGFYDQLPWELEWAGVVDGYSRIQVFFKVILPLVKPGLAVTAIFGFLSGWGEFIFINTFILDQQTWTL
SRLIKGVIGDFRFVDYGLLTAVSLFYMLPTLVFYLFTNKYLLEVNITGTKG
>Mature_291_residues
MMEKTTGRTYKITFFQRKKEKIASLVIYTILIVVSLPIVLGYLWLFLSSFSENMKYGIIPTKLTLHNWRFLWESIAGYPN
IWHITLNTLIVALMVMFLELFITSFAGYALSRFKFKGRRTMLMGILVLHSFPSVSLLVAIYYVLKVLGLINNLWGVILLK
AALEIPWGAWIMKGFYDQLPWELEWAGVVDGYSRIQVFFKVILPLVKPGLAVTAIFGFLSGWGEFIFINTFILDQQTWTL
SRLIKGVIGDFRFVDYGLLTAVSLFYMLPTLVFYLFTNKYLLEVNITGTKG

Specific function: Could be part of a binding-protein-dependent transport system for arabinogalactan oligomers; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=194, Percent_Identity=27.319587628866, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1790464, Length=253, Percent_Identity=27.2727272727273, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33517; Mature: 33517

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMEKTTGRTYKITFFQRKKEKIASLVIYTILIVVSLPIVLGYLWLFLSSFSENMKYGIIP
CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCC
TKLTLHNWRFLWESIAGYPNIWHITLNTLIVALMVMFLELFITSFAGYALSRFKFKGRRT
CEEHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
MLMGILVLHSFPSVSLLVAIYYVLKVLGLINNLWGVILLKAALEIPWGAWIMKGFYDQLP
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
WELEWAGVVDGYSRIQVFFKVILPLVKPGLAVTAIFGFLSGWGEFIFINTFILDQQTWTL
CCEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEEEECCCHHHH
SRLIKGVIGDFRFVDYGLLTAVSLFYMLPTLVFYLFTNKYLLEVNITGTKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
>Mature Secondary Structure
MMEKTTGRTYKITFFQRKKEKIASLVIYTILIVVSLPIVLGYLWLFLSSFSENMKYGIIP
CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCC
TKLTLHNWRFLWESIAGYPNIWHITLNTLIVALMVMFLELFITSFAGYALSRFKFKGRRT
CEEHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
MLMGILVLHSFPSVSLLVAIYYVLKVLGLINNLWGVILLKAALEIPWGAWIMKGFYDQLP
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
WELEWAGVVDGYSRIQVFFKVILPLVKPGLAVTAIFGFLSGWGEFIFINTFILDQQTWTL
CCEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEEEECCCHHHH
SRLIKGVIGDFRFVDYGLLTAVSLFYMLPTLVFYLFTNKYLLEVNITGTKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]