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The map label for this gene is ugpA [H]

Identifier: 239617375

GI number: 239617375

Start: 1039616

End: 1040572

Strand: Reverse

Name: ugpA [H]

Synonym: Kole_0985

Alternate gene names: 239617375

Gene position: 1040572-1039616 (Counterclockwise)

Preceding gene: 239617376

Following gene: 239617374

Centisome position: 45.2

GC content: 39.71

Gene sequence:

>957_bases
GTGCTTCTTGTTGCACGTCGACATATGAAAAGCAAAGCAGTCGTTTATAAAAGATCCAGATTAAAAACCCGTTTTACACT
GGCAACCTTTATTATGCCAGCATTACTGCTTACCGTGGTATTCTTTTTCATACCGGTTATTTTAACGGTTATTCTATCTT
TAACCTCGATGGATTATAGATTCAACTGGGATTTCGTGGGGATACAGAACTTCATAGACATGTTTAGAGATTTCATGATC
AAGGGAGTCATCAAGAACACGATCATATATGTCGCTTTTACCCTTGCATTTTTCAATGTCGGTTTGTCTCTTGTTCTTTC
GATTTTAACGACAAGTATAGGAGATCGTGGTGGCACCATCTTCAGGCTCATCTGGATGATGCCCCGATTAACTCCATCTG
TCGTTTATGGATTGCTCTGGCTGTGGATCTTCGATCCCACAAAGTACGGTTTGATAAATGGAATACGTTCAGCCCTTTTC
AACGGGGTAGAACCTATTGATTTCTTGTGGCAACATCCTATGCTCATTATCATCATCGCCAACGGGTTCGTTGGTGCTTC
GTTTGGAATGATCTTATTTACCTCTGCGATTAAATCTATTCCAAAGGATTATTTATATGCAGCAAGTGTAGATGGAGCTA
GCTGGTTTTACAGATTAAGAAAGATCATTCTCCCATTGCTAAAATGGCAGATACTTTTTACAACGGCATACCAAACGTTA
TCACTTCTTACATCCTTCGAATACATTCTCATAATCACCGACGGTGGCCCTGTGTTCTCAACAGAAGTCTGGGCACTTTA
CACATACCATAATGCTTTTGAAAACTTTAGATTTGGTTTCGGAGCAGCTCTTTCATTAGTACTGGTAGTAATTGGTCTGG
TAGCTTCTCTGGTGTATTTGAAAATATTCAGATTCAAGGAAATGATTCAAGAACCACGGATAGAGGTTGATGCATGA

Upstream 100 bases:

>100_bases
GTAATAATTAAGTAATCACCGTTCTTTCCCGTCCTCGCACACTCGTTTTGAGTGTGCGGGGTTATTTCCCTTGTTTTTGG
ACTCTTTTTGAAGGGAGGAA

Downstream 100 bases:

>100_bases
TGGAAAAAACGACAGGAAGAACATATAAAATCACCTTTTTTCAAAGAAAGAAAGAGAAAATTGCAAGCCTGGTAATCTAC
ACCATTCTAATCGTTGTAAG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MLLVARRHMKSKAVVYKRSRLKTRFTLATFIMPALLLTVVFFFIPVILTVILSLTSMDYRFNWDFVGIQNFIDMFRDFMI
KGVIKNTIIYVAFTLAFFNVGLSLVLSILTTSIGDRGGTIFRLIWMMPRLTPSVVYGLLWLWIFDPTKYGLINGIRSALF
NGVEPIDFLWQHPMLIIIIANGFVGASFGMILFTSAIKSIPKDYLYAASVDGASWFYRLRKIILPLLKWQILFTTAYQTL
SLLTSFEYILIITDGGPVFSTEVWALYTYHNAFENFRFGFGAALSLVLVVIGLVASLVYLKIFRFKEMIQEPRIEVDA

Sequences:

>Translated_318_residues
MLLVARRHMKSKAVVYKRSRLKTRFTLATFIMPALLLTVVFFFIPVILTVILSLTSMDYRFNWDFVGIQNFIDMFRDFMI
KGVIKNTIIYVAFTLAFFNVGLSLVLSILTTSIGDRGGTIFRLIWMMPRLTPSVVYGLLWLWIFDPTKYGLINGIRSALF
NGVEPIDFLWQHPMLIIIIANGFVGASFGMILFTSAIKSIPKDYLYAASVDGASWFYRLRKIILPLLKWQILFTTAYQTL
SLLTSFEYILIITDGGPVFSTEVWALYTYHNAFENFRFGFGAALSLVLVVIGLVASLVYLKIFRFKEMIQEPRIEVDA
>Mature_318_residues
MLLVARRHMKSKAVVYKRSRLKTRFTLATFIMPALLLTVVFFFIPVILTVILSLTSMDYRFNWDFVGIQNFIDMFRDFMI
KGVIKNTIIYVAFTLAFFNVGLSLVLSILTTSIGDRGGTIFRLIWMMPRLTPSVVYGLLWLWIFDPTKYGLINGIRSALF
NGVEPIDFLWQHPMLIIIIANGFVGASFGMILFTSAIKSIPKDYLYAASVDGASWFYRLRKIILPLLKWQILFTTAYQTL
SLLTSFEYILIITDGGPVFSTEVWALYTYHNAFENFRFGFGAALSLVLVVIGLVASLVYLKIFRFKEMIQEPRIEVDA

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=299, Percent_Identity=27.0903010033445, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1790465, Length=262, Percent_Identity=32.4427480916031, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36445; Mature: 36445

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLVARRHMKSKAVVYKRSRLKTRFTLATFIMPALLLTVVFFFIPVILTVILSLTSMDYR
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
FNWDFVGIQNFIDMFRDFMIKGVIKNTIIYVAFTLAFFNVGLSLVLSILTTSIGDRGGTI
ECCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
FRLIWMMPRLTPSVVYGLLWLWIFDPTKYGLINGIRSALFNGVEPIDFLWQHPMLIIIIA
HHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEEE
NGFVGASFGMILFTSAIKSIPKDYLYAASVDGASWFYRLRKIILPLLKWQILFTTAYQTL
CCCHHHHHHHHHHHHHHHHCCHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLLTSFEYILIITDGGPVFSTEVWALYTYHNAFENFRFGFGAALSLVLVVIGLVASLVYL
HHHHCCCEEEEEECCCCEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
KIFRFKEMIQEPRIEVDA
HHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLLVARRHMKSKAVVYKRSRLKTRFTLATFIMPALLLTVVFFFIPVILTVILSLTSMDYR
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
FNWDFVGIQNFIDMFRDFMIKGVIKNTIIYVAFTLAFFNVGLSLVLSILTTSIGDRGGTI
ECCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
FRLIWMMPRLTPSVVYGLLWLWIFDPTKYGLINGIRSALFNGVEPIDFLWQHPMLIIIIA
HHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEEE
NGFVGASFGMILFTSAIKSIPKDYLYAASVDGASWFYRLRKIILPLLKWQILFTTAYQTL
CCCHHHHHHHHHHHHHHHHCCHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLLTSFEYILIITDGGPVFSTEVWALYTYHNAFENFRFGFGAALSLVLVVIGLVASLVYL
HHHHCCCEEEEEECCCCEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
KIFRFKEMIQEPRIEVDA
HHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11481431 [H]