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The map label for this gene is 239617348

Identifier: 239617348

GI number: 239617348

Start: 1013241

End: 1014029

Strand: Reverse

Name: 239617348

Synonym: Kole_0958

Alternate gene names: NA

Gene position: 1014029-1013241 (Counterclockwise)

Preceding gene: 239617349

Following gene: 239617337

Centisome position: 44.05

GC content: 43.47

Gene sequence:

>789_bases
ATGAGTGGATACAATCTTGAGAAAAAAGAATTCGATAAGACCCTTAACTTCAGAGCGGTGAAGCCTTATGGAGATACAAT
GAATGATGGAAAAGTTCAGCTCAGCTTCACACTACCCGTTCCCGCTGGCGAGGAAGCCGTTGAGGCTGCAAAACGTCTCA
TGAAGAAAATGGGACTCCAAAACCCGCAGATTGTTTACTGGAAGGAGCTAACCCACGGATTCACTTTCTTTGTGGCTTAT
GGAGAATGTGTTCACACGGTTGATTACACAGCTATAAAGGTTCCAAAGGCAAACGTGAAAAAAATGACGATGCAGGAAAT
AGATGAGTATATAAAGGAAAACATTGGCAGGAAAATAGTTGTTGTTGGGGCTACTACAGGTACTGACGCGCATACAGTTG
GTCTGGATGCTATTATGAATATGAAGGGATTTGCCGGCCACTACGGTCTGGAGCGCTATCAGATGTTTGAAACTTACAAC
ATGGGCAGCCAGGTTCCAAATGAAGAGTTTGTTGCGAAAGCCATAGAGGTTAATGCTGACGCTCTCCTTGTATCTCAAAC
AGTTACGGCTAAGGATGCACACATCAAAAATATGACCGAATTGGTAGAACTTTTGGAAGCCGAGGGAATTCGTGATAAAG
TAATATTAATTGCGGGTGGTGCGAGAATAACTTACGAACTTGCCAAAGAACTCGGTTACGATGCGGGATTTGGACCTGGA
ACATTTGCGGAAGATGTTGCGGCTTTCATAGCCCAAGAAATGGTTAGAAGAATGAGGAAAGAAAAGTGA

Upstream 100 bases:

>100_bases
AACGCAGTAAAACCGGCGGAAAAGGACTCGATGGAGTTGTAGAAAAAGGGAAAAATTATTTCAATCCGTTTATTCCGAAG
ATGTTGGGGGTTGATGAAGA

Downstream 100 bases:

>100_bases
AGAAAAAGTTTAAGGAGTGAAAACGTGAAGGTTTTGGTGATCGTTAATCCAACCGCTTCCAATGGAAAAGGTCTTACCGA
TTATAAGAACGAAATTTCAG

Product: cobalamin B12-binding domain protein

Products: (3S,5S)-3,5-diaminohexanoate

Alternate protein names: D-Ornithine Aminomutase E Component; L-Beta-Lysine 5 6-Aminomutase Beta Subunit; D-Lysine; D-Lysine 56-Aminomutase Beta Subunit; D-Ornithine 4 5-Aminomutase E Subunit; Cobalamin Vitamin; Beta-Lysine 5 6-Aminomutase Beta Subunit; Beta-Lysine 56-Aminomutase Beta Subunit; Methylmalonyl-CoA Mutase C- Domain/Subunit; D-Lysine 5 6-Aminomutase Subunit Beta; D-Lysine 5 6-Aminomutase Beta Subunit; Lysine 5 6-Aminomutase Beta Subunit

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MSGYNLEKKEFDKTLNFRAVKPYGDTMNDGKVQLSFTLPVPAGEEAVEAAKRLMKKMGLQNPQIVYWKELTHGFTFFVAY
GECVHTVDYTAIKVPKANVKKMTMQEIDEYIKENIGRKIVVVGATTGTDAHTVGLDAIMNMKGFAGHYGLERYQMFETYN
MGSQVPNEEFVAKAIEVNADALLVSQTVTAKDAHIKNMTELVELLEAEGIRDKVILIAGGARITYELAKELGYDAGFGPG
TFAEDVAAFIAQEMVRRMRKEK

Sequences:

>Translated_262_residues
MSGYNLEKKEFDKTLNFRAVKPYGDTMNDGKVQLSFTLPVPAGEEAVEAAKRLMKKMGLQNPQIVYWKELTHGFTFFVAY
GECVHTVDYTAIKVPKANVKKMTMQEIDEYIKENIGRKIVVVGATTGTDAHTVGLDAIMNMKGFAGHYGLERYQMFETYN
MGSQVPNEEFVAKAIEVNADALLVSQTVTAKDAHIKNMTELVELLEAEGIRDKVILIAGGARITYELAKELGYDAGFGPG
TFAEDVAAFIAQEMVRRMRKEK
>Mature_261_residues
SGYNLEKKEFDKTLNFRAVKPYGDTMNDGKVQLSFTLPVPAGEEAVEAAKRLMKKMGLQNPQIVYWKELTHGFTFFVAYG
ECVHTVDYTAIKVPKANVKKMTMQEIDEYIKENIGRKIVVVGATTGTDAHTVGLDAIMNMKGFAGHYGLERYQMFETYNM
GSQVPNEEFVAKAIEVNADALLVSQTVTAKDAHIKNMTELVELLEAEGIRDKVILIAGGARITYELAKELGYDAGFGPGT
FAEDVAAFIAQEMVRRMRKEK

Specific function: Unknown

COG id: COG5012

COG function: function code R; Predicted cobalamin binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 5.4.3.3

Molecular weight: Translated: 29184; Mature: 29053

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGYNLEKKEFDKTLNFRAVKPYGDTMNDGKVQLSFTLPVPAGEEAVEAAKRLMKKMGLQ
CCCCCCCHHHHHHCCCEEEECCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCC
NPQIVYWKELTHGFTFFVAYGECVHTVDYTAIKVPKANVKKMTMQEIDEYIKENIGRKIV
CCCEEEEEHHCCCEEEEEEHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCEEE
VVGATTGTDAHTVGLDAIMNMKGFAGHYGLERYQMFETYNMGSQVPNEEFVAKAIEVNAD
EEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCC
ALLVSQTVTAKDAHIKNMTELVELLEAEGIRDKVILIAGGARITYELAKELGYDAGFGPG
EEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCC
TFAEDVAAFIAQEMVRRMRKEK
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SGYNLEKKEFDKTLNFRAVKPYGDTMNDGKVQLSFTLPVPAGEEAVEAAKRLMKKMGLQ
CCCCCCHHHHHHCCCEEEECCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCC
NPQIVYWKELTHGFTFFVAYGECVHTVDYTAIKVPKANVKKMTMQEIDEYIKENIGRKIV
CCCEEEEEHHCCCEEEEEEHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCEEE
VVGATTGTDAHTVGLDAIMNMKGFAGHYGLERYQMFETYNMGSQVPNEEFVAKAIEVNAD
EEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCC
ALLVSQTVTAKDAHIKNMTELVELLEAEGIRDKVILIAGGARITYELAKELGYDAGFGPG
EEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCC
TFAEDVAAFIAQEMVRRMRKEK
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: (3S)-3,6-diaminohexanoate

Specific reaction: (3S)-3,6-diaminohexanoate = (3S,5S)-3,5-diaminohexanoate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA