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The map label for this gene is ugpE [H]

Identifier: 239617328

GI number: 239617328

Start: 991430

End: 992248

Strand: Reverse

Name: ugpE [H]

Synonym: Kole_0937

Alternate gene names: 239617328

Gene position: 992248-991430 (Counterclockwise)

Preceding gene: 239617329

Following gene: 239617327

Centisome position: 43.1

GC content: 39.32

Gene sequence:

>819_bases
ATGGGAATGAAGAAGACATGGTACATACATTTGATACTTTTGATCGGTGCTATGCTCATGATTTTTCCTTTTGTTTGGAT
GTTTTTATCTGCTTTCAAAACGGATATGGATGTTTTCTCCTATCCCCCAAAATGGCTGCCATCAACCTGGACCTTTGAAA
ATTTCTCCAGAGTTCTTGAGATGATCCCCTTCGGGAGATATTATCTGAACAGCATTATAGTGACTTTTGCAATAACCTTT
GGTCAGGTTTTCTTAGCTATACTGGCGGCTTATGCTTTGGCAAGGTTGCACTTTCCAGGAAAGATCCCAATAATGATCTT
TCTTCTATCGACAATGATAATGCCGTTCCAGGTCACTCTAATACCCACTTTTATCATTGTGTACAAGCTCGGATGGATTG
ATACCTATCAGGGACTTATTGTTCCGTTTCTTTACAGTGGGTTCTCCATATTTTTCCTCAGACAATTCTTTGTAACGATT
CCCAAAGATCTTGAAGATGCTGCAAAGATAGATGGTTGTGGCTACTTCAGAATCCTTTTTAACGTCATTGTTCCAAACTC
TAAAGCTCCCATAGGAACGATTTCCCTTTTTGTATTCCTGACATACTGGAGAAGTTATTTGTGGCCACTTGTAGTTACCA
ATTCTCCTGAAATGAGAACCCTGCCGATAGGTCTCAAATATTTTGTAGAAGAAGGCGGTACACAGTATAACTTGATGATG
GCCGCATCACTGATGGCTATTGTTCCTGTATTAATTGTATATATATTGGCCGAGAGATATCTGGTTAAATCCACAACGTT
AACCGGTTTGAAGTTTTGA

Upstream 100 bases:

>100_bases
CATCTGCAGCGGCGTTGATTCTGTTTGGCATGGTTATTGCTTTGACACAAGTCCAAAAGAGACTTGGCAGAAAATCCGTT
GAGTATTCTTGAGCGGGGTG

Downstream 100 bases:

>100_bases
ACTCTAAAGGAGGAGGTGTTTTGTTATGAGAAAGCTTCTTTTAGTGGGGTTGTTGGTTCTTTTCACAATTACGGTGCTTT
CTGTGGAGATCGTGTTCTGG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MGMKKTWYIHLILLIGAMLMIFPFVWMFLSAFKTDMDVFSYPPKWLPSTWTFENFSRVLEMIPFGRYYLNSIIVTFAITF
GQVFLAILAAYALARLHFPGKIPIMIFLLSTMIMPFQVTLIPTFIIVYKLGWIDTYQGLIVPFLYSGFSIFFLRQFFVTI
PKDLEDAAKIDGCGYFRILFNVIVPNSKAPIGTISLFVFLTYWRSYLWPLVVTNSPEMRTLPIGLKYFVEEGGTQYNLMM
AASLMAIVPVLIVYILAERYLVKSTTLTGLKF

Sequences:

>Translated_272_residues
MGMKKTWYIHLILLIGAMLMIFPFVWMFLSAFKTDMDVFSYPPKWLPSTWTFENFSRVLEMIPFGRYYLNSIIVTFAITF
GQVFLAILAAYALARLHFPGKIPIMIFLLSTMIMPFQVTLIPTFIIVYKLGWIDTYQGLIVPFLYSGFSIFFLRQFFVTI
PKDLEDAAKIDGCGYFRILFNVIVPNSKAPIGTISLFVFLTYWRSYLWPLVVTNSPEMRTLPIGLKYFVEEGGTQYNLMM
AASLMAIVPVLIVYILAERYLVKSTTLTGLKF
>Mature_271_residues
GMKKTWYIHLILLIGAMLMIFPFVWMFLSAFKTDMDVFSYPPKWLPSTWTFENFSRVLEMIPFGRYYLNSIIVTFAITFG
QVFLAILAAYALARLHFPGKIPIMIFLLSTMIMPFQVTLIPTFIIVYKLGWIDTYQGLIVPFLYSGFSIFFLRQFFVTIP
KDLEDAAKIDGCGYFRILFNVIVPNSKAPIGTISLFVFLTYWRSYLWPLVVTNSPEMRTLPIGLKYFVEEGGTQYNLMMA
ASLMAIVPVLIVYILAERYLVKSTTLTGLKF

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=267, Percent_Identity=29.2134831460674, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI1787571, Length=258, Percent_Identity=32.1705426356589, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI1790464, Length=209, Percent_Identity=25.8373205741627, Blast_Score=75, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31390; Mature: 31259

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMKKTWYIHLILLIGAMLMIFPFVWMFLSAFKTDMDVFSYPPKWLPSTWTFENFSRVLE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHHH
MIPFGRYYLNSIIVTFAITFGQVFLAILAAYALARLHFPGKIPIMIFLLSTMIMPFQVTL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
IPTFIIVYKLGWIDTYQGLIVPFLYSGFSIFFLRQFFVTIPKDLEDAAKIDGCGYFRILF
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHH
NVIVPNSKAPIGTISLFVFLTYWRSYLWPLVVTNSPEMRTLPIGLKYFVEEGGTQYNLMM
HHHCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCEEECHHHHHHHHCCCCEEHHHH
AASLMAIVPVLIVYILAERYLVKSTTLTGLKF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GMKKTWYIHLILLIGAMLMIFPFVWMFLSAFKTDMDVFSYPPKWLPSTWTFENFSRVLE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHHH
MIPFGRYYLNSIIVTFAITFGQVFLAILAAYALARLHFPGKIPIMIFLLSTMIMPFQVTL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
IPTFIIVYKLGWIDTYQGLIVPFLYSGFSIFFLRQFFVTIPKDLEDAAKIDGCGYFRILF
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHH
NVIVPNSKAPIGTISLFVFLTYWRSYLWPLVVTNSPEMRTLPIGLKYFVEEGGTQYNLMM
HHHCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCEEECHHHHHHHHCCCCEEHHHH
AASLMAIVPVLIVYILAERYLVKSTTLTGLKF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11481431 [H]