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The map label for this gene is odh [H]

Identifier: 239617315

GI number: 239617315

Start: 978020

End: 979105

Strand: Direct

Name: odh [H]

Synonym: Kole_0924

Alternate gene names: 239617315

Gene position: 978020-979105 (Clockwise)

Preceding gene: 239617313

Following gene: 239617316

Centisome position: 42.48

GC content: 44.94

Gene sequence:

>1086_bases
ATGAAAATCTGCGTTGTTGGCGCTGGCAATGGTGGACAGGCTATCGCCGCTTATCTCGCAATGCATGGACATGACGTTGC
TCTTTTTAATCGAAGCCGGAAAAGAATATCCGGAATTCTCTATGCACGAAAGATCAGAATAGAGGGCGAATCCAGTGGCG
TTGCTACGCTAAGTTACGTTGGAACAAACATCGAAAAAGCAATAGAAGGAAGAAAATTAATTATGGTGGTAGTTCCCGCT
TTTGCGCATGCTTCCGTTGCTAAAAGAGTCGCTCCATATCTTGAAGATGGTCAGGTCATTGTCCTTAATCCTGGCAGAAC
CGGTGGTGCACTGGAGTTTAGAAGAGTATTAGACGAGATGAATGTCAAGAAAGATATCGTTATTGCCGAAGCTCAAACCT
TTGTTTTCGCCTCAAGAATCACGGGGCCGGGAACAGTAAAGATATTTAAAATTAAAAATGCTGTTCCTGTTGCCGCATTA
CCTGCGTCTAAAAACGATCTACTTTTCGAAACTCTACCTAAAGTGCTTCCTGAATTCGTGGTTTCTCCGAATGTTCTTTA
CACTAGTTTCAACAACATAGGAGCCGTATTCCACCCCGGAGCACTTTTGATGAACGCTGGTTGGGTAGAATCAAGGCATG
GAAATTTCCAGTTTTACCTTGAGGGAATAAGCCCTTCGGTGGCAAGAGTTCTGGAAAAAATCGATGAGGAACGTTGCCAG
ATAGCCCGTGCACTCGGGGCAGAACCGATGACGGCTGTTGAATGGATCGATTTCGCCTACGACGTCCAGGGTATCGATCT
GTACGACGCAATTCATAACAATGAAGGATATCAGGGAATAGCTGCACCCGTTAGTCTTTCTAATAGGTACATTCTCGAAG
ATGTACCCATGAGTCTCGTGCCTATAAGCTCTTTCGGAAAGTACCTCGGTATTCCGACACCAGCTATCGATTCGATTGTC
AACATCGCTAATTTTGCGCTCAGAAGAAATTTCTGGAAAGACGGAAGAACGGTTGAGCACCTTGGACTTGCCAATATGAC
CGTGGATCAGATATGGAACTTTGTTGAGAACGGGAGAGATACATGA

Upstream 100 bases:

>100_bases
TTGATTTGACGGGTTTTCACTTTCGTTTTATTCTATTTCTTACCCATTAAATTCAGTTTTTTCAAGTTTCCACCGGTTCC
AGGATATGGGAGGTGGCAAC

Downstream 100 bases:

>100_bases
TGTCGAAAAAGAAAATAATCGCAGGTGCCCTTGGAAGCGATGTTCATGTAGCCGGTGTGCTCAATTTTCTCGATTTAGCA
AACAAAGAAGGATATGACAC

Product: NAD/NADP octopine/nopaline dehydrogenase

Products: NA

Alternate protein names: N-(1-D-carboxyethyl)-L-norvaline dehydrogenase [H]

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MKICVVGAGNGGQAIAAYLAMHGHDVALFNRSRKRISGILYARKIRIEGESSGVATLSYVGTNIEKAIEGRKLIMVVVPA
FAHASVAKRVAPYLEDGQVIVLNPGRTGGALEFRRVLDEMNVKKDIVIAEAQTFVFASRITGPGTVKIFKIKNAVPVAAL
PASKNDLLFETLPKVLPEFVVSPNVLYTSFNNIGAVFHPGALLMNAGWVESRHGNFQFYLEGISPSVARVLEKIDEERCQ
IARALGAEPMTAVEWIDFAYDVQGIDLYDAIHNNEGYQGIAAPVSLSNRYILEDVPMSLVPISSFGKYLGIPTPAIDSIV
NIANFALRRNFWKDGRTVEHLGLANMTVDQIWNFVENGRDT

Sequences:

>Translated_361_residues
MKICVVGAGNGGQAIAAYLAMHGHDVALFNRSRKRISGILYARKIRIEGESSGVATLSYVGTNIEKAIEGRKLIMVVVPA
FAHASVAKRVAPYLEDGQVIVLNPGRTGGALEFRRVLDEMNVKKDIVIAEAQTFVFASRITGPGTVKIFKIKNAVPVAAL
PASKNDLLFETLPKVLPEFVVSPNVLYTSFNNIGAVFHPGALLMNAGWVESRHGNFQFYLEGISPSVARVLEKIDEERCQ
IARALGAEPMTAVEWIDFAYDVQGIDLYDAIHNNEGYQGIAAPVSLSNRYILEDVPMSLVPISSFGKYLGIPTPAIDSIV
NIANFALRRNFWKDGRTVEHLGLANMTVDQIWNFVENGRDT
>Mature_361_residues
MKICVVGAGNGGQAIAAYLAMHGHDVALFNRSRKRISGILYARKIRIEGESSGVATLSYVGTNIEKAIEGRKLIMVVVPA
FAHASVAKRVAPYLEDGQVIVLNPGRTGGALEFRRVLDEMNVKKDIVIAEAQTFVFASRITGPGTVKIFKIKNAVPVAAL
PASKNDLLFETLPKVLPEFVVSPNVLYTSFNNIGAVFHPGALLMNAGWVESRHGNFQFYLEGISPSVARVLEKIDEERCQ
IARALGAEPMTAVEWIDFAYDVQGIDLYDAIHNNEGYQGIAAPVSLSNRYILEDVPMSLVPISSFGKYLGIPTPAIDSIV
NIANFALRRNFWKDGRTVEHLGLANMTVDQIWNFVENGRDT

Specific function: In the forward direction acts also on secondary amine dicarboxylates such as N-(1-carboxyethyl)methionine and N-(1- carboxyethyl)phenylalanine. In the reverse direction, the enzyme also acts on neutral amino acids as an amino donor. They include L-amino a

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lysopine/nopaline/octopine/opine/vitopine dehydrogenases family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR013328
- InterPro:   IPR006168
- InterPro:   IPR011128
- InterPro:   IPR016040
- InterPro:   IPR003421 [H]

Pfam domain/function: PF01210 NAD_Gly3P_dh_N; PF02317 Octopine_DH [H]

EC number: =1.5.1.28 [H]

Molecular weight: Translated: 39474; Mature: 39474

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKICVVGAGNGGQAIAAYLAMHGHDVALFNRSRKRISGILYARKIRIEGESSGVATLSYV
CEEEEEECCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHEEEEEEEEEECCCCCEEEEEEC
GTNIEKAIEGRKLIMVVVPAFAHASVAKRVAPYLEDGQVIVLNPGRTGGALEFRRVLDEM
CCCHHHHHCCCEEEEEEECHHHHHHHHHHHCCHHCCCEEEEECCCCCCCHHHHHHHHHHC
NVKKDIVIAEAQTFVFASRITGPGTVKIFKIKNAVPVAALPASKNDLLFETLPKVLPEFV
CCCCEEEEEEHHEEEEEEECCCCCEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHH
VSPNVLYTSFNNIGAVFHPGALLMNAGWVESRHGNFQFYLEGISPSVARVLEKIDEERCQ
CCCCEEEEECCCCCCEECCCCCEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH
IARALGAEPMTAVEWIDFAYDVQGIDLYDAIHNNEGYQGIAAPVSLSNRYILEDVPMSLV
HHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEECCEECCCCEEEECCCCEEE
PISSFGKYLGIPTPAIDSIVNIANFALRRNFWKDGRTVEHLGLANMTVDQIWNFVENGRD
EHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCCCCHHHHHHHHHCCCC
T
C
>Mature Secondary Structure
MKICVVGAGNGGQAIAAYLAMHGHDVALFNRSRKRISGILYARKIRIEGESSGVATLSYV
CEEEEEECCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHEEEEEEEEEECCCCCEEEEEEC
GTNIEKAIEGRKLIMVVVPAFAHASVAKRVAPYLEDGQVIVLNPGRTGGALEFRRVLDEM
CCCHHHHHCCCEEEEEEECHHHHHHHHHHHCCHHCCCEEEEECCCCCCCHHHHHHHHHHC
NVKKDIVIAEAQTFVFASRITGPGTVKIFKIKNAVPVAALPASKNDLLFETLPKVLPEFV
CCCCEEEEEEHHEEEEEEECCCCCEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHH
VSPNVLYTSFNNIGAVFHPGALLMNAGWVESRHGNFQFYLEGISPSVARVLEKIDEERCQ
CCCCEEEEECCCCCCEECCCCCEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH
IARALGAEPMTAVEWIDFAYDVQGIDLYDAIHNNEGYQGIAAPVSLSNRYILEDVPMSLV
HHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEECCEECCCCEEEECCCCEEE
PISSFGKYLGIPTPAIDSIVNIANFALRRNFWKDGRTVEHLGLANMTVDQIWNFVENGRD
EHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCCCCHHHHHHHHHCCCC
T
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7487048; 2753861; 9665174 [H]