BacMap

Definition	Kosmotoga olearia TBF 19.5.1, complete genome.
Accession	NC_012785
Length	2,302,126

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The map label for this gene is cshA [H]

Identifier: 239617313

GI number: 239617313

Start: 975211

End: 976785

Strand: Direct

Name: cshA [H]

Synonym: Kole_0922

Alternate gene names: 239617313

Gene position: 975211-976785 (Clockwise)

Preceding gene: 239617310

Following gene: 239617315

Centisome position: 42.36

GC content: 40.95

Gene sequence:

>1575_bases
ATGAGTATGAATTTTAGTGAAATGGGTTTATCCCGAAAGATGTTGAACTCCATTGAAAAAGTGGGGTTTGTAGAACCTAC
TCCGATACAATCTAAAGCAATACCGGTGATTTTAAATGGAAGAGATATAATTGGCCAGGCACATACCGGAACCGGTAAGA
CAGCCGCTTTTGGAATACCTCTTCTTGAAATGCTGGATTACTCATCAAAAAAAGTACAAGCGCTTATTCTCTGCCCAACA
AGGGAACTGGCTGTTCAGGTGGCACGCGAAATAGCTGCGTTGGCCTCTAATCGCAAGGAAATAGAAGTACTTGCTATATA
CGGTGGGCAATCTATAGAACGGCAGATAAATACCCTAAAGAAAGGAATTCAAGTTGTTGTTGGTACTCCCGGCAGAATAA
TGGATCATATGCGAAGAAAGACGCTCAAGCTCGATGACACAAAATTTGTAGTGCTGGATGAAGCTGATGAGATGCTAAAT
ATGGGGTTTCTTGAGGATATACGGTACATACTCAGCCATGTTGGAAAAGAACGACAAATCACTATGTTTTCAGCCACCAT
GCCGAAAGCAATTATAGCTCTGGCTCAGGAATTTCAGAAAGAACCTGAACTGATAAAGGTGATAAATAGAGAATTGACTG
TTTCCACGGTAGAACAATATTATCTTGAAATAGGGGAATCCAGAAAGTTTGATGCTCTTTCAAAGCTCATTGAGTATTAC
AATCCGCAACTTTCGTTGGTTTTTTGCAACACGAAGAAGAAAGTAGATGAACTTGTTCCGATGCTTCAGGCTAAAGGTTA
TCTTGTCGACGGGCTCCACGGAGATATGAGTCAATCATTGAGAAACAGAGTCATGAACAGTTTCAGGAATAAATCGATTA
AAGTTCTTGTAGCCACCGATGTTGCTGCTCGTGGTATAGACGTTGATGATATCGAGGCAGTTTTTAATTACGATATACCC
CAGGATGAGGAATATTATGTTCACAGAATAGGAAGAACTGGAAGGGCAGGAAAAACCGGAAAAGCCTTCAGTTTCGCCTA
CGGTCGTTCTCTTCACAGGTTGAGAGAAATACAACGTTATACAAAAATCAAGATAAAATCCTTAAACGTGCCCTCAGAAA
AGGATGTGAACACAAAAAGAATGGAAAGCTTTCTTGGTGAAATCAATGATATCCTCGAACAGGGCAATCTAAGTGATTAC
GTTCCTGCTGTAGAGGAACTTATTGCAAGGGGTTACACCTCAATGGAAATAGCTGCTGCACTAATAAAAATGAATGTGTC
AAAAAGAGCCTATTCTCAGAATGAGGCTGGGGCTAAGAATAACAATCGTGACCGTGAGATGATAAAGCTGTTCGTCAGCG
CGGGGAGTAAGCATAACATAAGAGTTAGAGATATTGTTGGAGCAATTACCGGCGAGGCGGGTATTCCCGGTGATCGCATA
GGTTCAATTGAACTTTTGAGTAAGCATAGTTATGTGGAAGTTGAGCGCAGATATGCTGAATTGGTTATTGATTCTCTCAA
TCGCTGCAAGATAAAGGGAAACAAAATAGTTGCCGAATTAGCAAGAGCAAAGTGA

Upstream 100 bases:

>100_bases
TTACAGCCAGAGAGAAATTTACCTCACTGACATCATTTGTGATAAATGAACCTTTATCAAAGTATATAATTTATGGAATC
TATTTGAAAGGATATGACGA

Downstream 100 bases:

>100_bases
ATTAACCGATAGTAAGCCTGTTTCTACCCCTTTGTTTACTTATATACATCAGCTCATCGGCACGCTTTATGATACTCTCT
TTTGTGTCGCCTTGTTTTGC

Product: DEAD/DEAH box helicase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 524; Mature: 523

Protein sequence:

>524_residues
MSMNFSEMGLSRKMLNSIEKVGFVEPTPIQSKAIPVILNGRDIIGQAHTGTGKTAAFGIPLLEMLDYSSKKVQALILCPT
RELAVQVAREIAALASNRKEIEVLAIYGGQSIERQINTLKKGIQVVVGTPGRIMDHMRRKTLKLDDTKFVVLDEADEMLN
MGFLEDIRYILSHVGKERQITMFSATMPKAIIALAQEFQKEPELIKVINRELTVSTVEQYYLEIGESRKFDALSKLIEYY
NPQLSLVFCNTKKKVDELVPMLQAKGYLVDGLHGDMSQSLRNRVMNSFRNKSIKVLVATDVAARGIDVDDIEAVFNYDIP
QDEEYYVHRIGRTGRAGKTGKAFSFAYGRSLHRLREIQRYTKIKIKSLNVPSEKDVNTKRMESFLGEINDILEQGNLSDY
VPAVEELIARGYTSMEIAAALIKMNVSKRAYSQNEAGAKNNNRDREMIKLFVSAGSKHNIRVRDIVGAITGEAGIPGDRI
GSIELLSKHSYVEVERRYAELVIDSLNRCKIKGNKIVAELARAK

Sequences:

>Translated_524_residues
MSMNFSEMGLSRKMLNSIEKVGFVEPTPIQSKAIPVILNGRDIIGQAHTGTGKTAAFGIPLLEMLDYSSKKVQALILCPT
RELAVQVAREIAALASNRKEIEVLAIYGGQSIERQINTLKKGIQVVVGTPGRIMDHMRRKTLKLDDTKFVVLDEADEMLN
MGFLEDIRYILSHVGKERQITMFSATMPKAIIALAQEFQKEPELIKVINRELTVSTVEQYYLEIGESRKFDALSKLIEYY
NPQLSLVFCNTKKKVDELVPMLQAKGYLVDGLHGDMSQSLRNRVMNSFRNKSIKVLVATDVAARGIDVDDIEAVFNYDIP
QDEEYYVHRIGRTGRAGKTGKAFSFAYGRSLHRLREIQRYTKIKIKSLNVPSEKDVNTKRMESFLGEINDILEQGNLSDY
VPAVEELIARGYTSMEIAAALIKMNVSKRAYSQNEAGAKNNNRDREMIKLFVSAGSKHNIRVRDIVGAITGEAGIPGDRI
GSIELLSKHSYVEVERRYAELVIDSLNRCKIKGNKIVAELARAK
>Mature_523_residues
SMNFSEMGLSRKMLNSIEKVGFVEPTPIQSKAIPVILNGRDIIGQAHTGTGKTAAFGIPLLEMLDYSSKKVQALILCPTR
ELAVQVAREIAALASNRKEIEVLAIYGGQSIERQINTLKKGIQVVVGTPGRIMDHMRRKTLKLDDTKFVVLDEADEMLNM
GFLEDIRYILSHVGKERQITMFSATMPKAIIALAQEFQKEPELIKVINRELTVSTVEQYYLEIGESRKFDALSKLIEYYN
PQLSLVFCNTKKKVDELVPMLQAKGYLVDGLHGDMSQSLRNRVMNSFRNKSIKVLVATDVAARGIDVDDIEAVFNYDIPQ
DEEYYVHRIGRTGRAGKTGKAFSFAYGRSLHRLREIQRYTKIKIKSLNVPSEKDVNTKRMESFLGEINDILEQGNLSDYV
PAVEELIARGYTSMEIAAALIKMNVSKRAYSQNEAGAKNNNRDREMIKLFVSAGSKHNIRVRDIVGAITGEAGIPGDRIG
SIELLSKHSYVEVERRYAELVIDSLNRCKIKGNKIVAELARAK

Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI7661920, Length=366, Percent_Identity=40.4371584699454, Blast_Score=296, Evalue=5e-80,
Organism=Homo sapiens, GI45446747, Length=354, Percent_Identity=40.6779661016949, Blast_Score=257, Evalue=2e-68,
Organism=Homo sapiens, GI45446743, Length=354, Percent_Identity=40.6779661016949, Blast_Score=257, Evalue=2e-68,
Organism=Homo sapiens, GI164664518, Length=371, Percent_Identity=36.3881401617251, Blast_Score=255, Evalue=7e-68,
Organism=Homo sapiens, GI41327773, Length=351, Percent_Identity=41.025641025641, Blast_Score=250, Evalue=3e-66,
Organism=Homo sapiens, GI83700235, Length=367, Percent_Identity=38.9645776566758, Blast_Score=249, Evalue=5e-66,
Organism=Homo sapiens, GI13129006, Length=398, Percent_Identity=36.4321608040201, Blast_Score=246, Evalue=3e-65,
Organism=Homo sapiens, GI4503529, Length=371, Percent_Identity=38.544474393531, Blast_Score=246, Evalue=4e-65,
Organism=Homo sapiens, GI20149629, Length=373, Percent_Identity=35.656836461126, Blast_Score=245, Evalue=8e-65,
Organism=Homo sapiens, GI301171475, Length=378, Percent_Identity=39.1534391534392, Blast_Score=244, Evalue=2e-64,
Organism=Homo sapiens, GI87196351, Length=378, Percent_Identity=39.1534391534392, Blast_Score=243, Evalue=2e-64,
Organism=Homo sapiens, GI301171467, Length=378, Percent_Identity=39.1534391534392, Blast_Score=243, Evalue=3e-64,
Organism=Homo sapiens, GI169881239, Length=366, Percent_Identity=40.1639344262295, Blast_Score=242, Evalue=6e-64,
Organism=Homo sapiens, GI13514809, Length=366, Percent_Identity=40.1639344262295, Blast_Score=242, Evalue=6e-64,
Organism=Homo sapiens, GI4758138, Length=352, Percent_Identity=37.5, Blast_Score=241, Evalue=1e-63,
Organism=Homo sapiens, GI222352149, Length=336, Percent_Identity=39.8809523809524, Blast_Score=241, Evalue=1e-63,
Organism=Homo sapiens, GI41327771, Length=378, Percent_Identity=38.3597883597884, Blast_Score=239, Evalue=3e-63,
Organism=Homo sapiens, GI148613856, Length=362, Percent_Identity=36.4640883977901, Blast_Score=239, Evalue=6e-63,
Organism=Homo sapiens, GI38201710, Length=362, Percent_Identity=36.4640883977901, Blast_Score=239, Evalue=6e-63,
Organism=Homo sapiens, GI262118318, Length=357, Percent_Identity=36.9747899159664, Blast_Score=237, Evalue=2e-62,
Organism=Homo sapiens, GI216548263, Length=357, Percent_Identity=36.9747899159664, Blast_Score=236, Evalue=3e-62,
Organism=Homo sapiens, GI13518015, Length=357, Percent_Identity=36.9747899159664, Blast_Score=236, Evalue=4e-62,
Organism=Homo sapiens, GI262231852, Length=357, Percent_Identity=36.9747899159664, Blast_Score=236, Evalue=5e-62,
Organism=Homo sapiens, GI50659095, Length=388, Percent_Identity=36.0824742268041, Blast_Score=235, Evalue=6e-62,
Organism=Homo sapiens, GI21071032, Length=355, Percent_Identity=38.0281690140845, Blast_Score=232, Evalue=6e-61,
Organism=Homo sapiens, GI224593278, Length=379, Percent_Identity=35.6200527704486, Blast_Score=231, Evalue=2e-60,
Organism=Homo sapiens, GI55749865, Length=344, Percent_Identity=37.2093023255814, Blast_Score=228, Evalue=1e-59,
Organism=Homo sapiens, GI31542656, Length=375, Percent_Identity=34.1333333333333, Blast_Score=222, Evalue=8e-58,
Organism=Homo sapiens, GI188035877, Length=408, Percent_Identity=32.5980392156863, Blast_Score=216, Evalue=4e-56,
Organism=Homo sapiens, GI21040371, Length=381, Percent_Identity=31.758530183727, Blast_Score=211, Evalue=9e-55,
Organism=Homo sapiens, GI4758112, Length=381, Percent_Identity=31.758530183727, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI18375623, Length=381, Percent_Identity=31.758530183727, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI41327776, Length=373, Percent_Identity=32.7077747989276, Blast_Score=206, Evalue=5e-53,
Organism=Homo sapiens, GI6005743, Length=382, Percent_Identity=35.3403141361257, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI8922886, Length=382, Percent_Identity=35.3403141361257, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI164419743, Length=351, Percent_Identity=33.6182336182336, Blast_Score=203, Evalue=4e-52,
Organism=Homo sapiens, GI51094101, Length=351, Percent_Identity=33.6182336182336, Blast_Score=203, Evalue=4e-52,
Organism=Homo sapiens, GI62241022, Length=365, Percent_Identity=35.8904109589041, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI256223453, Length=352, Percent_Identity=32.3863636363636, Blast_Score=196, Evalue=4e-50,
Organism=Homo sapiens, GI164419732, Length=364, Percent_Identity=34.0659340659341, Blast_Score=195, Evalue=1e-49,
Organism=Homo sapiens, GI13514831, Length=402, Percent_Identity=32.089552238806, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI41327779, Length=357, Percent_Identity=33.8935574229692, Blast_Score=192, Evalue=5e-49,
Organism=Homo sapiens, GI62241024, Length=343, Percent_Identity=35.8600583090379, Blast_Score=184, Evalue=1e-46,
Organism=Homo sapiens, GI38569503, Length=349, Percent_Identity=34.6704871060172, Blast_Score=180, Evalue=3e-45,
Organism=Homo sapiens, GI38569505, Length=349, Percent_Identity=34.6704871060172, Blast_Score=180, Evalue=4e-45,
Organism=Homo sapiens, GI38327634, Length=330, Percent_Identity=33.6363636363636, Blast_Score=176, Evalue=7e-44,
Organism=Homo sapiens, GI9506931, Length=383, Percent_Identity=30.5483028720627, Blast_Score=174, Evalue=2e-43,
Organism=Homo sapiens, GI17505907, Length=401, Percent_Identity=29.1770573566085, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI256773275, Length=387, Percent_Identity=29.7157622739018, Blast_Score=163, Evalue=4e-40,
Organism=Homo sapiens, GI9966805, Length=306, Percent_Identity=31.3725490196078, Blast_Score=129, Evalue=5e-30,
Organism=Homo sapiens, GI154759257, Length=387, Percent_Identity=27.906976744186, Blast_Score=126, Evalue=5e-29,
Organism=Homo sapiens, GI20336298, Length=220, Percent_Identity=34.5454545454545, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI4826686, Length=331, Percent_Identity=27.7945619335347, Blast_Score=119, Evalue=1e-26,
Organism=Escherichia coli, GI87082221, Length=548, Percent_Identity=36.3138686131387, Blast_Score=366, Evalue=1e-102,
Organism=Escherichia coli, GI1787605, Length=379, Percent_Identity=39.3139841688654, Blast_Score=288, Evalue=5e-79,
Organism=Escherichia coli, GI1787016, Length=384, Percent_Identity=41.40625, Blast_Score=288, Evalue=8e-79,
Organism=Escherichia coli, GI1790214, Length=365, Percent_Identity=38.0821917808219, Blast_Score=246, Evalue=3e-66,
Organism=Escherichia coli, GI1788930, Length=373, Percent_Identity=35.3887399463807, Blast_Score=202, Evalue=6e-53,
Organism=Escherichia coli, GI48994977, Length=332, Percent_Identity=24.6987951807229, Blast_Score=91, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71995724, Length=366, Percent_Identity=41.2568306010929, Blast_Score=297, Evalue=1e-80,
Organism=Caenorhabditis elegans, GI17507121, Length=366, Percent_Identity=40.9836065573771, Blast_Score=296, Evalue=2e-80,
Organism=Caenorhabditis elegans, GI71987143, Length=366, Percent_Identity=39.344262295082, Blast_Score=288, Evalue=6e-78,
Organism=Caenorhabditis elegans, GI17552114, Length=375, Percent_Identity=35.2, Blast_Score=249, Evalue=3e-66,
Organism=Caenorhabditis elegans, GI17555296, Length=342, Percent_Identity=37.719298245614, Blast_Score=246, Evalue=2e-65,
Organism=Caenorhabditis elegans, GI86570094, Length=352, Percent_Identity=39.7727272727273, Blast_Score=241, Evalue=7e-64,
Organism=Caenorhabditis elegans, GI115533224, Length=334, Percent_Identity=39.8203592814371, Blast_Score=240, Evalue=1e-63,
Organism=Caenorhabditis elegans, GI32565321, Length=377, Percent_Identity=37.1352785145889, Blast_Score=239, Evalue=2e-63,
Organism=Caenorhabditis elegans, GI17510309, Length=363, Percent_Identity=37.1900826446281, Blast_Score=233, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI17510307, Length=363, Percent_Identity=37.1900826446281, Blast_Score=233, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI71995514, Length=363, Percent_Identity=37.1900826446281, Blast_Score=232, Evalue=3e-61,
Organism=Caenorhabditis elegans, GI71995718, Length=376, Percent_Identity=37.7659574468085, Blast_Score=231, Evalue=5e-61,
Organism=Caenorhabditis elegans, GI17537549, Length=359, Percent_Identity=36.2116991643454, Blast_Score=231, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI17552642, Length=352, Percent_Identity=36.9318181818182, Blast_Score=216, Evalue=3e-56,
Organism=Caenorhabditis elegans, GI71999646, Length=393, Percent_Identity=32.5699745547074, Blast_Score=216, Evalue=3e-56,
Organism=Caenorhabditis elegans, GI17510559, Length=388, Percent_Identity=33.7628865979381, Blast_Score=215, Evalue=4e-56,
Organism=Caenorhabditis elegans, GI115532546, Length=378, Percent_Identity=34.1269841269841, Blast_Score=215, Evalue=4e-56,
Organism=Caenorhabditis elegans, GI115532548, Length=378, Percent_Identity=34.1269841269841, Blast_Score=215, Evalue=5e-56,
Organism=Caenorhabditis elegans, GI71999644, Length=393, Percent_Identity=32.5699745547074, Blast_Score=214, Evalue=7e-56,
Organism=Caenorhabditis elegans, GI17507945, Length=361, Percent_Identity=36.8421052631579, Blast_Score=214, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI71982858, Length=381, Percent_Identity=31.758530183727, Blast_Score=210, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI17507877, Length=368, Percent_Identity=35.054347826087, Blast_Score=202, Evalue=4e-52,
Organism=Caenorhabditis elegans, GI193206561, Length=345, Percent_Identity=32.7536231884058, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI17507879, Length=369, Percent_Identity=34.6883468834688, Blast_Score=195, Evalue=4e-50,
Organism=Caenorhabditis elegans, GI17507881, Length=370, Percent_Identity=32.4324324324324, Blast_Score=194, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI17509811, Length=354, Percent_Identity=33.8983050847458, Blast_Score=191, Evalue=7e-49,
Organism=Caenorhabditis elegans, GI193208216, Length=380, Percent_Identity=32.3684210526316, Blast_Score=185, Evalue=6e-47,
Organism=Caenorhabditis elegans, GI17553716, Length=362, Percent_Identity=29.0055248618785, Blast_Score=176, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI17536099, Length=393, Percent_Identity=31.2977099236641, Blast_Score=175, Evalue=5e-44,
Organism=Caenorhabditis elegans, GI17536101, Length=393, Percent_Identity=31.2977099236641, Blast_Score=175, Evalue=6e-44,
Organism=Caenorhabditis elegans, GI17536103, Length=393, Percent_Identity=31.2977099236641, Blast_Score=171, Evalue=7e-43,
Organism=Caenorhabditis elegans, GI17556951, Length=349, Percent_Identity=30.3724928366762, Blast_Score=162, Evalue=5e-40,
Organism=Caenorhabditis elegans, GI17508543, Length=389, Percent_Identity=30.0771208226221, Blast_Score=162, Evalue=5e-40,
Organism=Caenorhabditis elegans, GI17505370, Length=342, Percent_Identity=30.4093567251462, Blast_Score=159, Evalue=3e-39,
Organism=Caenorhabditis elegans, GI17507641, Length=408, Percent_Identity=30.6372549019608, Blast_Score=158, Evalue=7e-39,
Organism=Caenorhabditis elegans, GI32564046, Length=398, Percent_Identity=30.1507537688442, Blast_Score=148, Evalue=6e-36,
Organism=Caenorhabditis elegans, GI71990816, Length=369, Percent_Identity=30.0813008130081, Blast_Score=145, Evalue=4e-35,
Organism=Caenorhabditis elegans, GI25148203, Length=405, Percent_Identity=27.1604938271605, Blast_Score=139, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI71982862, Length=206, Percent_Identity=33.495145631068, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI25148291, Length=378, Percent_Identity=26.4550264550265, Blast_Score=126, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI71997889, Length=351, Percent_Identity=25.6410256410256, Blast_Score=110, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI71987152, Length=102, Percent_Identity=44.1176470588235, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17557982, Length=385, Percent_Identity=26.4935064935065, Blast_Score=100, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI25148205, Length=329, Percent_Identity=25.531914893617, Blast_Score=97, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6320224, Length=372, Percent_Identity=40.8602150537634, Blast_Score=287, Evalue=2e-78,
Organism=Saccharomyces cerevisiae, GI6322912, Length=370, Percent_Identity=38.6486486486486, Blast_Score=258, Evalue=2e-69,
Organism=Saccharomyces cerevisiae, GI6322323, Length=370, Percent_Identity=38.6486486486486, Blast_Score=258, Evalue=2e-69,
Organism=Saccharomyces cerevisiae, GI6324217, Length=350, Percent_Identity=39.7142857142857, Blast_Score=249, Evalue=7e-67,
Organism=Saccharomyces cerevisiae, GI6324778, Length=361, Percent_Identity=37.9501385041551, Blast_Score=242, Evalue=1e-64,
Organism=Saccharomyces cerevisiae, GI6320041, Length=342, Percent_Identity=37.4269005847953, Blast_Score=239, Evalue=8e-64,
Organism=Saccharomyces cerevisiae, GI6325138, Length=362, Percent_Identity=37.5690607734807, Blast_Score=238, Evalue=2e-63,
Organism=Saccharomyces cerevisiae, GI6321856, Length=344, Percent_Identity=38.0813953488372, Blast_Score=230, Evalue=4e-61,
Organism=Saccharomyces cerevisiae, GI6321360, Length=360, Percent_Identity=38.0555555555556, Blast_Score=229, Evalue=9e-61,
Organism=Saccharomyces cerevisiae, GI6323021, Length=368, Percent_Identity=37.5, Blast_Score=227, Evalue=4e-60,
Organism=Saccharomyces cerevisiae, GI6324620, Length=369, Percent_Identity=36.5853658536585, Blast_Score=225, Evalue=1e-59,
Organism=Saccharomyces cerevisiae, GI6321963, Length=383, Percent_Identity=34.4647519582245, Blast_Score=209, Evalue=8e-55,
Organism=Saccharomyces cerevisiae, GI6320449, Length=391, Percent_Identity=34.5268542199489, Blast_Score=201, Evalue=3e-52,
Organism=Saccharomyces cerevisiae, GI6323947, Length=449, Percent_Identity=31.6258351893096, Blast_Score=194, Evalue=3e-50,
Organism=Saccharomyces cerevisiae, GI6320119, Length=370, Percent_Identity=30.8108108108108, Blast_Score=193, Evalue=5e-50,
Organism=Saccharomyces cerevisiae, GI6322427, Length=356, Percent_Identity=33.1460674157303, Blast_Score=186, Evalue=1e-47,
Organism=Saccharomyces cerevisiae, GI6319714, Length=374, Percent_Identity=31.5508021390374, Blast_Score=179, Evalue=1e-45,
Organism=Saccharomyces cerevisiae, GI6321111, Length=370, Percent_Identity=30.5405405405405, Blast_Score=178, Evalue=2e-45,
Organism=Saccharomyces cerevisiae, GI6319618, Length=425, Percent_Identity=30.1176470588235, Blast_Score=168, Evalue=2e-42,
Organism=Saccharomyces cerevisiae, GI6321267, Length=353, Percent_Identity=32.8611898016997, Blast_Score=167, Evalue=3e-42,
Organism=Saccharomyces cerevisiae, GI6323306, Length=416, Percent_Identity=29.0865384615385, Blast_Score=159, Evalue=1e-39,
Organism=Saccharomyces cerevisiae, GI6320173, Length=206, Percent_Identity=38.8349514563107, Blast_Score=154, Evalue=3e-38,
Organism=Saccharomyces cerevisiae, GI6320400, Length=424, Percent_Identity=29.2452830188679, Blast_Score=147, Evalue=4e-36,
Organism=Saccharomyces cerevisiae, GI6322876, Length=471, Percent_Identity=25.6900212314225, Blast_Score=132, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6324366, Length=354, Percent_Identity=26.271186440678, Blast_Score=120, Evalue=8e-28,
Organism=Saccharomyces cerevisiae, GI6321374, Length=408, Percent_Identity=26.2254901960784, Blast_Score=92, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24645031, Length=366, Percent_Identity=39.6174863387978, Blast_Score=287, Evalue=1e-77,
Organism=Drosophila melanogaster, GI24582080, Length=366, Percent_Identity=39.8907103825137, Blast_Score=263, Evalue=2e-70,
Organism=Drosophila melanogaster, GI24582078, Length=366, Percent_Identity=39.8907103825137, Blast_Score=263, Evalue=2e-70,
Organism=Drosophila melanogaster, GI17136248, Length=366, Percent_Identity=39.8907103825137, Blast_Score=263, Evalue=2e-70,
Organism=Drosophila melanogaster, GI24582075, Length=366, Percent_Identity=39.8907103825137, Blast_Score=263, Evalue=2e-70,
Organism=Drosophila melanogaster, GI24584399, Length=351, Percent_Identity=41.5954415954416, Blast_Score=260, Evalue=2e-69,
Organism=Drosophila melanogaster, GI28574962, Length=355, Percent_Identity=40.2816901408451, Blast_Score=259, Evalue=4e-69,
Organism=Drosophila melanogaster, GI24642151, Length=351, Percent_Identity=38.7464387464387, Blast_Score=250, Evalue=2e-66,
Organism=Drosophila melanogaster, GI24583279, Length=364, Percent_Identity=35.7142857142857, Blast_Score=248, Evalue=6e-66,
Organism=Drosophila melanogaster, GI24583281, Length=364, Percent_Identity=35.7142857142857, Blast_Score=248, Evalue=7e-66,
Organism=Drosophila melanogaster, GI18857967, Length=372, Percent_Identity=37.0967741935484, Blast_Score=244, Evalue=1e-64,
Organism=Drosophila melanogaster, GI17985987, Length=368, Percent_Identity=38.5869565217391, Blast_Score=241, Evalue=1e-63,
Organism=Drosophila melanogaster, GI24662330, Length=351, Percent_Identity=38.4615384615385, Blast_Score=240, Evalue=2e-63,
Organism=Drosophila melanogaster, GI21355075, Length=341, Percent_Identity=36.6568914956012, Blast_Score=240, Evalue=2e-63,
Organism=Drosophila melanogaster, GI24585582, Length=344, Percent_Identity=36.9186046511628, Blast_Score=238, Evalue=7e-63,
Organism=Drosophila melanogaster, GI24584994, Length=376, Percent_Identity=37.5, Blast_Score=236, Evalue=3e-62,
Organism=Drosophila melanogaster, GI24644483, Length=354, Percent_Identity=36.7231638418079, Blast_Score=232, Evalue=4e-61,
Organism=Drosophila melanogaster, GI24644487, Length=354, Percent_Identity=36.7231638418079, Blast_Score=232, Evalue=5e-61,
Organism=Drosophila melanogaster, GI45551833, Length=354, Percent_Identity=36.7231638418079, Blast_Score=232, Evalue=5e-61,
Organism=Drosophila melanogaster, GI24644485, Length=354, Percent_Identity=36.7231638418079, Blast_Score=232, Evalue=5e-61,
Organism=Drosophila melanogaster, GI281361218, Length=354, Percent_Identity=36.7231638418079, Blast_Score=232, Evalue=5e-61,
Organism=Drosophila melanogaster, GI24644481, Length=354, Percent_Identity=36.7231638418079, Blast_Score=232, Evalue=5e-61,
Organism=Drosophila melanogaster, GI24644479, Length=354, Percent_Identity=36.7231638418079, Blast_Score=232, Evalue=5e-61,
Organism=Drosophila melanogaster, GI21356161, Length=416, Percent_Identity=34.6153846153846, Blast_Score=229, Evalue=5e-60,
Organism=Drosophila melanogaster, GI17977678, Length=355, Percent_Identity=36.9014084507042, Blast_Score=225, Evalue=7e-59,
Organism=Drosophila melanogaster, GI28575014, Length=344, Percent_Identity=37.5, Blast_Score=223, Evalue=2e-58,
Organism=Drosophila melanogaster, GI281365720, Length=314, Percent_Identity=37.2611464968153, Blast_Score=207, Evalue=1e-53,
Organism=Drosophila melanogaster, GI24581954, Length=382, Percent_Identity=32.7225130890052, Blast_Score=205, Evalue=7e-53,
Organism=Drosophila melanogaster, GI24581952, Length=382, Percent_Identity=32.7225130890052, Blast_Score=205, Evalue=7e-53,
Organism=Drosophila melanogaster, GI24581956, Length=382, Percent_Identity=32.7225130890052, Blast_Score=205, Evalue=7e-53,
Organism=Drosophila melanogaster, GI17136814, Length=404, Percent_Identity=34.6534653465347, Blast_Score=202, Evalue=4e-52,
Organism=Drosophila melanogaster, GI21355559, Length=444, Percent_Identity=31.5315315315315, Blast_Score=192, Evalue=6e-49,
Organism=Drosophila melanogaster, GI17647335, Length=379, Percent_Identity=30.0791556728232, Blast_Score=182, Evalue=4e-46,
Organism=Drosophila melanogaster, GI28571808, Length=436, Percent_Identity=30.2752293577982, Blast_Score=179, Evalue=3e-45,
Organism=Drosophila melanogaster, GI28571809, Length=436, Percent_Identity=30.2752293577982, Blast_Score=179, Evalue=3e-45,
Organism=Drosophila melanogaster, GI20130173, Length=434, Percent_Identity=29.7235023041475, Blast_Score=168, Evalue=8e-42,
Organism=Drosophila melanogaster, GI24666101, Length=345, Percent_Identity=33.6231884057971, Blast_Score=165, Evalue=8e-41,
Organism=Drosophila melanogaster, GI24642822, Length=415, Percent_Identity=28.433734939759, Blast_Score=155, Evalue=7e-38,
Organism=Drosophila melanogaster, GI17136666, Length=403, Percent_Identity=28.7841191066998, Blast_Score=142, Evalue=8e-34,
Organism=Drosophila melanogaster, GI24643725, Length=381, Percent_Identity=25.1968503937008, Blast_Score=135, Evalue=6e-32,
Organism=Drosophila melanogaster, GI24668515, Length=396, Percent_Identity=27.7777777777778, Blast_Score=130, Evalue=3e-30,
Organism=Drosophila melanogaster, GI18859659, Length=209, Percent_Identity=32.5358851674641, Blast_Score=119, Evalue=4e-27,
Organism=Drosophila melanogaster, GI28571338, Length=209, Percent_Identity=32.5358851674641, Blast_Score=119, Evalue=4e-27,
Organism=Drosophila melanogaster, GI19920478, Length=336, Percent_Identity=27.6785714285714, Blast_Score=118, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24640164, Length=348, Percent_Identity=24.7126436781609, Blast_Score=104, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 58813; Mature: 58682

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMNFSEMGLSRKMLNSIEKVGFVEPTPIQSKAIPVILNGRDIIGQAHTGTGKTAAFGIP
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCCHHHCCH
LLEMLDYSSKKVQALILCPTRELAVQVAREIAALASNRKEIEVLAIYGGQSIERQINTLK
HHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHH
KGIQVVVGTPGRIMDHMRRKTLKLDDTKFVVLDEADEMLNMGFLEDIRYILSHVGKERQI
HCCEEEECCCHHHHHHHHHHCEEECCCEEEEECCHHHHHHCHHHHHHHHHHHHCCCCCEE
TMFSATMPKAIIALAQEFQKEPELIKVINRELTVSTVEQYYLEIGESRKFDALSKLIEYY
EEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
NPQLSLVFCNTKKKVDELVPMLQAKGYLVDGLHGDMSQSLRNRVMNSFRNKSIKVLVATD
CCCEEEEEECCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEEC
VAARGIDVDDIEAVFNYDIPQDEEYYVHRIGRTGRAGKTGKAFSFAYGRSLHRLREIQRY
HHHCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
TKIKIKSLNVPSEKDVNTKRMESFLGEINDILEQGNLSDYVPAVEELIARGYTSMEIAAA
HHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH
LIKMNVSKRAYSQNEAGAKNNNRDREMIKLFVSAGSKHNIRVRDIVGAITGEAGIPGDRI
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEHHHHHHHHCCCCCCCCCCC
GSIELLSKHSYVEVERRYAELVIDSLNRCKIKGNKIVAELARAK
CCHHHHCCCCHHHHHHHHHHHHHHHHHHCEECCCHHHHHHHHCC
>Mature Secondary Structure 
SMNFSEMGLSRKMLNSIEKVGFVEPTPIQSKAIPVILNGRDIIGQAHTGTGKTAAFGIP
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCCHHHCCH
LLEMLDYSSKKVQALILCPTRELAVQVAREIAALASNRKEIEVLAIYGGQSIERQINTLK
HHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHH
KGIQVVVGTPGRIMDHMRRKTLKLDDTKFVVLDEADEMLNMGFLEDIRYILSHVGKERQI
HCCEEEECCCHHHHHHHHHHCEEECCCEEEEECCHHHHHHCHHHHHHHHHHHHCCCCCEE
TMFSATMPKAIIALAQEFQKEPELIKVINRELTVSTVEQYYLEIGESRKFDALSKLIEYY
EEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
NPQLSLVFCNTKKKVDELVPMLQAKGYLVDGLHGDMSQSLRNRVMNSFRNKSIKVLVATD
CCCEEEEEECCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEEC
VAARGIDVDDIEAVFNYDIPQDEEYYVHRIGRTGRAGKTGKAFSFAYGRSLHRLREIQRY
HHHCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
TKIKIKSLNVPSEKDVNTKRMESFLGEINDILEQGNLSDYVPAVEELIARGYTSMEIAAA
HHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH
LIKMNVSKRAYSQNEAGAKNNNRDREMIKLFVSAGSKHNIRVRDIVGAITGEAGIPGDRI
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEHHHHHHHHCCCCCCCCCCC
GSIELLSKHSYVEVERRYAELVIDSLNRCKIKGNKIVAELARAK
CCHHHHCCCCHHHHHHHHHHHHHHHHHHCEECCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA