| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239616941
Identifier: 239616941
GI number: 239616941
Start: 592387
End: 593037
Strand: Direct
Name: 239616941
Synonym: Kole_0539
Alternate gene names: NA
Gene position: 592387-593037 (Clockwise)
Preceding gene: 239616939
Following gene: 239616946
Centisome position: 25.73
GC content: 37.17
Gene sequence:
>651_bases GTGGGTTGGTTCTTCGGTAAAAAAGAAGAAGAAATTCTGAACAGTTTTTTTAAGCACATCGAAAAAATACAGGAAGGAAT CGACCTTCTTGAACGCTTTTTTGACGCTTACGAAGATAACGATTGGGATCTTGTCGAGGAAATAAGAAACAAGATAAGTG ACATTGAACACGAAGCAGATGTAATCAGAAGAGACACAGAAAACGGAATGTACTCTGGCGCTTTTTTGCCCAATTTTCGC GGTGATTTGTTGGGTATCATAGAAAGTGCAGACAAAATTATGAACAAGATACAAACGGTTGCAGATTTGATATGGATGCA ACACGTTGAAGCTCCTTTAGAGATCAGAAAGGACCTGAAAGAACAGGTAAACCTTGTAATCAAAACTTTCAAATCTCTTG CAACGTCTTTGAGAGAAATGTTCGACAATATGGATAAAGCTCAAGCATATATAGAGGAAACCGAAAAGTTTGAACATGAA GAGGATTTGAAAGAAAAGGTAATGATTTCCACACTTTTTAAGCTTAAAGATATGTCTCTGGCGGAAAAACTCCAGATCAA GGAACTTATACTAAACATAGGTGATATAGCCGATCTTACTGAAGACACCTCTGATAGAGTTCAGATCGTTATAATGAAGC GCAAGGTTTAA
Upstream 100 bases:
>100_bases AAAAGTTATTGTTGAGATATTGCTGACATATAATTCAGATAACAAAAATGTACTATAATTAGATTGGAGGAATATAGCAG ATTTGGTTGGAGGTGAGTTT
Downstream 100 bases:
>100_bases GAAAGAAGGCTCACACGCTCGAGCGTGTGAGCAAATCACAAGAAAACACTTATAATTCCCAACATCGTTACACACATCAA ACCGCTAATAATGGGTGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MGWFFGKKEEEILNSFFKHIEKIQEGIDLLERFFDAYEDNDWDLVEEIRNKISDIEHEADVIRRDTENGMYSGAFLPNFR GDLLGIIESADKIMNKIQTVADLIWMQHVEAPLEIRKDLKEQVNLVIKTFKSLATSLREMFDNMDKAQAYIEETEKFEHE EDLKEKVMISTLFKLKDMSLAEKLQIKELILNIGDIADLTEDTSDRVQIVIMKRKV
Sequences:
>Translated_216_residues MGWFFGKKEEEILNSFFKHIEKIQEGIDLLERFFDAYEDNDWDLVEEIRNKISDIEHEADVIRRDTENGMYSGAFLPNFR GDLLGIIESADKIMNKIQTVADLIWMQHVEAPLEIRKDLKEQVNLVIKTFKSLATSLREMFDNMDKAQAYIEETEKFEHE EDLKEKVMISTLFKLKDMSLAEKLQIKELILNIGDIADLTEDTSDRVQIVIMKRKV >Mature_215_residues GWFFGKKEEEILNSFFKHIEKIQEGIDLLERFFDAYEDNDWDLVEEIRNKISDIEHEADVIRRDTENGMYSGAFLPNFRG DLLGIIESADKIMNKIQTVADLIWMQHVEAPLEIRKDLKEQVNLVIKTFKSLATSLREMFDNMDKAQAYIEETEKFEHEE DLKEKVMISTLFKLKDMSLAEKLQIKELILNIGDIADLTEDTSDRVQIVIMKRKV
Specific function: Unknown
COG id: COG1392
COG function: function code P; Phosphate transport regulator (distant homolog of PhoU)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0111 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002727 - InterPro: IPR018445 [H]
Pfam domain/function: PF01865 PhoU_div [H]
EC number: NA
Molecular weight: Translated: 25366; Mature: 25235
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWFFGKKEEEILNSFFKHIEKIQEGIDLLERFFDAYEDNDWDLVEEIRNKISDIEHEAD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH VIRRDTENGMYSGAFLPNFRGDLLGIIESADKIMNKIQTVADLIWMQHVEAPLEIRKDLK HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH EQVNLVIKTFKSLATSLREMFDNMDKAQAYIEETEKFEHEEDLKEKVMISTLFKLKDMSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH AEKLQIKELILNIGDIADLTEDTSDRVQIVIMKRKV HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC >Mature Secondary Structure GWFFGKKEEEILNSFFKHIEKIQEGIDLLERFFDAYEDNDWDLVEEIRNKISDIEHEAD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH VIRRDTENGMYSGAFLPNFRGDLLGIIESADKIMNKIQTVADLIWMQHVEAPLEIRKDLK HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH EQVNLVIKTFKSLATSLREMFDNMDKAQAYIEETEKFEHEEDLKEKVMISTLFKLKDMSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH AEKLQIKELILNIGDIADLTEDTSDRVQIVIMKRKV HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]