| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is engB
Identifier: 239616939
GI number: 239616939
Start: 589603
End: 590175
Strand: Direct
Name: engB
Synonym: Kole_0537
Alternate gene names: 239616939
Gene position: 589603-590175 (Clockwise)
Preceding gene: 239616938
Following gene: 239616941
Centisome position: 25.61
GC content: 38.92
Gene sequence:
>573_bases ATGTTGATAAAAAAGGTTGAACTCGTCAAAACCGCATTCAAACCCGGAGATTACCCTGAGCCTGTTAAAAGAGAAGTTGC TTTTGCCGGAAGGTCGAACGTCGGGAAATCTACATTGCTAAATACCCTTTTCCAGAGGAAATTAGCACATACAAGTTCCA AACCCGGGAAAACCAGATCTATAAACTTCTATCTGGTCAATTCAAAGTATTACTTCGTGGACCTTCCAGGTTACGGTTTT GCAAGTGCATCCAAACAAGAACTTGCAAGATGGAAAGAACTGATAGAAGACTATTTTTCTACCCGTGATAACCTGAACCT TGTCACAATCCTAATGGATTCAAGGCATCCTATGCAGAAAAACGATTACAAAATGCTCGAATGGATAAAAGATTATTCAA TACCTTTTATCGTAGTCTTGACTAAAACCGACAAACTTTCGGGAAACGAATTGAAAAAGATGATCCAGATTTATGAGAAA GAATTAAAGTTATGGGGCTCACCACCAATCATTCCCTTTTCTGCAAAAACAAGGAGAGGGCTCAACGAACTGTTGAAAAT TTTGATACCGTGA
Upstream 100 bases:
>100_bases AAAAGAGATCTCGAGAAAGTTCCAGATGAAATAAAAGACAAGCTAAAATTTGTCTTCGTGGAAACAGTTAAAGAGGTCAT TGAGGAGGCTCTGGTAAAGG
Downstream 100 bases:
>100_bases GCCCGGCTACGCCGGGGGTAAGCACGATTCCGTCGTGGGTTAGCACGCTGGCGCGTGGGTAAGCTTGGCTGCGCCAAGGG TAAGCCCAGCTGCGCTGGGG
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MLIKKVELVKTAFKPGDYPEPVKREVAFAGRSNVGKSTLLNTLFQRKLAHTSSKPGKTRSINFYLVNSKYYFVDLPGYGF ASASKQELARWKELIEDYFSTRDNLNLVTILMDSRHPMQKNDYKMLEWIKDYSIPFIVVLTKTDKLSGNELKKMIQIYEK ELKLWGSPPIIPFSAKTRRGLNELLKILIP
Sequences:
>Translated_190_residues MLIKKVELVKTAFKPGDYPEPVKREVAFAGRSNVGKSTLLNTLFQRKLAHTSSKPGKTRSINFYLVNSKYYFVDLPGYGF ASASKQELARWKELIEDYFSTRDNLNLVTILMDSRHPMQKNDYKMLEWIKDYSIPFIVVLTKTDKLSGNELKKMIQIYEK ELKLWGSPPIIPFSAKTRRGLNELLKILIP >Mature_190_residues MLIKKVELVKTAFKPGDYPEPVKREVAFAGRSNVGKSTLLNTLFQRKLAHTSSKPGKTRSINFYLVNSKYYFVDLPGYGF ASASKQELARWKELIEDYFSTRDNLNLVTILMDSRHPMQKNDYKMLEWIKDYSIPFIVVLTKTDKLSGNELKKMIQIYEK ELKLWGSPPIIPFSAKTRRGLNELLKILIP
Specific function: Necessary for normal cell division and for the maintenance of normal septation
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain
Homologues:
Organism=Homo sapiens, GI56549685, Length=191, Percent_Identity=35.6020942408377, Blast_Score=111, Evalue=3e-25, Organism=Homo sapiens, GI56549687, Length=149, Percent_Identity=33.5570469798658, Blast_Score=80, Evalue=8e-16, Organism=Escherichia coli, GI145693205, Length=172, Percent_Identity=40.1162790697674, Blast_Score=128, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6320543, Length=139, Percent_Identity=32.3741007194245, Blast_Score=71, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ENGB_KOSOT (C5CEL1)
Other databases:
- EMBL: CP001634 - RefSeq: YP_002940261.1 - GeneID: 7967398 - GenomeReviews: CP001634_GR - KEGG: kol:Kole_0537 - ProtClustDB: PRK00454 - GO: GO:0005622 - HAMAP: MF_00321 - InterPro: IPR019987 - InterPro: IPR002917 - InterPro: IPR005225 - TIGRFAMs: TIGR03598 - TIGRFAMs: TIGR00231
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 21980; Mature: 21980
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIKKVELVKTAFKPGDYPEPVKREVAFAGRSNVGKSTLLNTLFQRKLAHTSSKPGKTRS CCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEE INFYLVNSKYYFVDLPGYGFASASKQELARWKELIEDYFSTRDNLNLVTILMDSRHPMQK EEEEEEECEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCC NDYKMLEWIKDYSIPFIVVLTKTDKLSGNELKKMIQIYEKELKLWGSPPIIPFSAKTRRG CHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH LNELLKILIP HHHHHHHHCC >Mature Secondary Structure MLIKKVELVKTAFKPGDYPEPVKREVAFAGRSNVGKSTLLNTLFQRKLAHTSSKPGKTRS CCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEE INFYLVNSKYYFVDLPGYGFASASKQELARWKELIEDYFSTRDNLNLVTILMDSRHPMQK EEEEEEECEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCC NDYKMLEWIKDYSIPFIVVLTKTDKLSGNELKKMIQIYEKELKLWGSPPIIPFSAKTRRG CHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH LNELLKILIP HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA