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The map label for this gene is 239616893

Identifier: 239616893

GI number: 239616893

Start: 528463

End: 529245

Strand: Direct

Name: 239616893

Synonym: Kole_0488

Alternate gene names: NA

Gene position: 528463-529245 (Clockwise)

Preceding gene: 239616892

Following gene: 239616894

Centisome position: 22.96

GC content: 38.83

Gene sequence:

>783_bases
GTGAGGATCAAAGTAATTCTCAAAGAAGCCAAAAACAAGGCTTTCAAAAGAGATCATTACCATCAGCTCGCTGGCATGAT
TTACAACATGATAAGAAAATCCAATCCAGAATTCTCCTCATGGCTCCATGAAAAAGGATTTATGGATGGAAACAAAAAAT
TCAAATTTTTCTGCTTCTCGAGGTTAATAGCTCCAAGAAATCACTACGAATACATCGGAGAAAACAAAGAATTAATCCTA
TTCAAAACCGATCAAGTATCTCTATACATTTCCTCACCGGTAGAAGAGTTCCTCACAAACCTGATAGAGTTTTTTCTTGC
CGAGGATTACGTAAAGCTTGGGGATCACACGTTGAAAGTAGACAGCGCCAGGGCACTCACTACACCAGATTTTGGAGATA
AAACTGTGTTTAAAGCAATCACACCAATAGTATTATCAAAAAGGGTTGAAGGATATAACACTCCTTTCTACATAAGAGCC
TACCAATCCCCCGATGAATTCGATGAATACCTCACAAAAAACGCGAAAGAAAAATGGAAAATCTTCACTGGTCAAGAAAA
CGCCGACATATCCCTTCAAGTCGATAGAACATATCTCGAAAAAAAGGGAAAAAGAACCTCGTGCAAAATCAACCTCAGTC
CTAACCAGACAATCATAGGATCAGTAGTCCCTGTAATTGCTATCGGAGATTCCGAGATCATAAGATTCCTATATGATGTT
GGCATTGGCCAGAAAAACTCCCTGGGAATGGGAATGGTCGAATTAGCAGGATACAAATATTAA

Upstream 100 bases:

>100_bases
AAACATACTCCCAAAACCCTTCCAGCCTGGAATAGCAGATGCCGTAGCCGAAGCAGTCATAAAAGCAGCGGAAGAGGAAT
AACAACAAGGAGGTTTACAG

Downstream 100 bases:

>100_bases
ATATCAACGCAATACGTAATCATATAGTAGGGACACAGCATGCTGTATAAAATTCGAGATCCGAGACCCGAGATCCGAGA
AGGCTGCTTCGCAGCGGACA

Product: CRISPR-associated protein Cas6

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MRIKVILKEAKNKAFKRDHYHQLAGMIYNMIRKSNPEFSSWLHEKGFMDGNKKFKFFCFSRLIAPRNHYEYIGENKELIL
FKTDQVSLYISSPVEEFLTNLIEFFLAEDYVKLGDHTLKVDSARALTTPDFGDKTVFKAITPIVLSKRVEGYNTPFYIRA
YQSPDEFDEYLTKNAKEKWKIFTGQENADISLQVDRTYLEKKGKRTSCKINLSPNQTIIGSVVPVIAIGDSEIIRFLYDV
GIGQKNSLGMGMVELAGYKY

Sequences:

>Translated_260_residues
MRIKVILKEAKNKAFKRDHYHQLAGMIYNMIRKSNPEFSSWLHEKGFMDGNKKFKFFCFSRLIAPRNHYEYIGENKELIL
FKTDQVSLYISSPVEEFLTNLIEFFLAEDYVKLGDHTLKVDSARALTTPDFGDKTVFKAITPIVLSKRVEGYNTPFYIRA
YQSPDEFDEYLTKNAKEKWKIFTGQENADISLQVDRTYLEKKGKRTSCKINLSPNQTIIGSVVPVIAIGDSEIIRFLYDV
GIGQKNSLGMGMVELAGYKY
>Mature_260_residues
MRIKVILKEAKNKAFKRDHYHQLAGMIYNMIRKSNPEFSSWLHEKGFMDGNKKFKFFCFSRLIAPRNHYEYIGENKELIL
FKTDQVSLYISSPVEEFLTNLIEFFLAEDYVKLGDHTLKVDSARALTTPDFGDKTVFKAITPIVLSKRVEGYNTPFYIRA
YQSPDEFDEYLTKNAKEKWKIFTGQENADISLQVDRTYLEKKGKRTSCKINLSPNQTIIGSVVPVIAIGDSEIIRFLYDV
GIGQKNSLGMGMVELAGYKY

Specific function: Unknown

COG id: COG1583

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010156
- InterPro:   IPR002743 [H]

Pfam domain/function: PF01881 DUF57 [H]

EC number: NA

Molecular weight: Translated: 30023; Mature: 30023

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIKVILKEAKNKAFKRDHYHQLAGMIYNMIRKSNPEFSSWLHEKGFMDGNKKFKFFCFS
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEHHHHH
RLIAPRNHYEYIGENKELILFKTDQVSLYISSPVEEFLTNLIEFFLAEDYVKLGDHTLKV
HHHCCCCHHHHHCCCCEEEEEEECEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCEEEEE
DSARALTTPDFGDKTVFKAITPIVLSKRVEGYNTPFYIRAYQSPDEFDEYLTKNAKEKWK
CCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHCCCCHHEE
IFTGQENADISLQVDRTYLEKKGKRTSCKINLSPNQTIIGSVVPVIAIGDSEIIRFLYDV
EEECCCCCCEEEEECHHHHHCCCCCCEEEEEECCCCEECCCCEEEEEECCHHHHHHHHHH
GIGQKNSLGMGMVELAGYKY
CCCCCCCCCCCHHHHCCCCC
>Mature Secondary Structure
MRIKVILKEAKNKAFKRDHYHQLAGMIYNMIRKSNPEFSSWLHEKGFMDGNKKFKFFCFS
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEHHHHH
RLIAPRNHYEYIGENKELILFKTDQVSLYISSPVEEFLTNLIEFFLAEDYVKLGDHTLKV
HHHCCCCHHHHHCCCCEEEEEEECEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCEEEEE
DSARALTTPDFGDKTVFKAITPIVLSKRVEGYNTPFYIRAYQSPDEFDEYLTKNAKEKWK
CCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHCCCCHHEE
IFTGQENADISLQVDRTYLEKKGKRTSCKINLSPNQTIIGSVVPVIAIGDSEIIRFLYDV
EEECCCCCCEEEEECHHHHHCCCCCCEEEEEECCCCEECCCCEEEEEECCHHHHHHHHHH
GIGQKNSLGMGMVELAGYKY
CCCCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]