| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
Click here to switch to the map view.
The map label for this gene is maeB [C]
Identifier: 239616892
GI number: 239616892
Start: 527290
End: 528444
Strand: Direct
Name: maeB [C]
Synonym: Kole_0487
Alternate gene names: 239616892
Gene position: 527290-528444 (Clockwise)
Preceding gene: 239616891
Following gene: 239616893
Centisome position: 22.9
GC content: 46.15
Gene sequence:
>1155_bases ATGGATCTCAAAGAAAAAGCACTTAAACAGCATGAATTATGGCAGGGAAAACTCGAGGTTATTTCCAAAGCGAAAGTAGA AACCTCCGAAGACCTCTCAATCGCCTACACCCCTGGAGTAGCCGAACCTTGCAGAAAAATAGCAGAAGATCCCGAAAAAG TGTATAAGTATACAATGAAAGGCAACACCGTTGCCGTAGTCACAGACGGAACGGCTGTTCTCGGTCTGGGAGACATCGGC CCCGAAGCCGCTTTGCCTGTGATGGAAGGAAAAGCGGTTCTCTTCAAAGAATTTGCCGGCATAGATGCTTTCCCGATATG CCTGGACACAAAAGATGTGGATGAAATAGTAAAAGCCGTTAAATACATTGCTCCCGGCTTTGGTGGAATAAACCTGGAAG ACATTTCCGCTCCACGATGCTTTGAAATCGAAGAAAGATTGAAAGCCGAATTAAATATCCCGGTTTTCCACGACGATCAG CACGGAACAGCTATAGTCGTGTTAGCCGGAATCATAAATTCTCTGAAGATCGTCCAGAAAAAGCCAAATGAAATGAAAGT AGTGATCAACGGGGCTGGCGCTGCCGGAATAGCGATCACAAAACTCCTGATAAAATTCGGCTTTAAGCACATAATCCTCT GCGATAAACCCGGAGCCATATATAGGGGAGCCGATTGGACAAATCCTGCCCAGACAAAAATCGCCGAAATCACCAACCCG GACAACGTAAAGGGAACTCTGAAAGAAGTAATAAAGGGTGCAGACCTGTTCATAGGGGTTTCAGCACCAAACATTGTCAC AGAAGAAATGATAGCTTCGATGAACAAAGACGCCATCGTTTTTGCTATGGCCAACCCTGTTCCGGAAATAATGCCGGATA AAGCAAAAGCGGGTGGTGCAAGGATAGTTGGAACAGGCCGCTCAGATTTCCCAAACCAGGTAAACAACGTCCTCGCATTC CCGGGAATATTCAAGGGGGCTCTAAAATGCCGAAAACAAATAACGGATAAAATGAAAATCGCCGCGGCTTACGCCATAGC CGGCATGATACCGGAATCCGAATTAAACGAAGAAAACATACTCCCAAAACCCTTCCAGCCTGGAATAGCAGATGCCGTAG CCGAAGCAGTCATAAAAGCAGCGGAAGAGGAATAA
Upstream 100 bases:
>100_bases CAGAGAACAACTCGTTCAATTAAGAGATGAATTCAATTTAGACCAGTATAAATTCCCCTGGGAATGATTATAAAAACCAG AAACATGCGGAGGGATAAAA
Downstream 100 bases:
>100_bases CAACAAGGAGGTTTACAGGTGAGGATCAAAGTAATTCTCAAAGAAGCCAAAAACAAGGCTTTCAAAAGAGATCATTACCA TCAGCTCGCTGGCATGATTT
Product: Malate dehydrogenase (oxaloacetate-decarboxylating)
Products: NA
Alternate protein names: NAD-ME [H]
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MDLKEKALKQHELWQGKLEVISKAKVETSEDLSIAYTPGVAEPCRKIAEDPEKVYKYTMKGNTVAVVTDGTAVLGLGDIG PEAALPVMEGKAVLFKEFAGIDAFPICLDTKDVDEIVKAVKYIAPGFGGINLEDISAPRCFEIEERLKAELNIPVFHDDQ HGTAIVVLAGIINSLKIVQKKPNEMKVVINGAGAAGIAITKLLIKFGFKHIILCDKPGAIYRGADWTNPAQTKIAEITNP DNVKGTLKEVIKGADLFIGVSAPNIVTEEMIASMNKDAIVFAMANPVPEIMPDKAKAGGARIVGTGRSDFPNQVNNVLAF PGIFKGALKCRKQITDKMKIAAAYAIAGMIPESELNEENILPKPFQPGIADAVAEAVIKAAEEE
Sequences:
>Translated_384_residues MDLKEKALKQHELWQGKLEVISKAKVETSEDLSIAYTPGVAEPCRKIAEDPEKVYKYTMKGNTVAVVTDGTAVLGLGDIG PEAALPVMEGKAVLFKEFAGIDAFPICLDTKDVDEIVKAVKYIAPGFGGINLEDISAPRCFEIEERLKAELNIPVFHDDQ HGTAIVVLAGIINSLKIVQKKPNEMKVVINGAGAAGIAITKLLIKFGFKHIILCDKPGAIYRGADWTNPAQTKIAEITNP DNVKGTLKEVIKGADLFIGVSAPNIVTEEMIASMNKDAIVFAMANPVPEIMPDKAKAGGARIVGTGRSDFPNQVNNVLAF PGIFKGALKCRKQITDKMKIAAAYAIAGMIPESELNEENILPKPFQPGIADAVAEAVIKAAEEE >Mature_384_residues MDLKEKALKQHELWQGKLEVISKAKVETSEDLSIAYTPGVAEPCRKIAEDPEKVYKYTMKGNTVAVVTDGTAVLGLGDIG PEAALPVMEGKAVLFKEFAGIDAFPICLDTKDVDEIVKAVKYIAPGFGGINLEDISAPRCFEIEERLKAELNIPVFHDDQ HGTAIVVLAGIINSLKIVQKKPNEMKVVINGAGAAGIAITKLLIKFGFKHIILCDKPGAIYRGADWTNPAQTKIAEITNP DNVKGTLKEVIKGADLFIGVSAPNIVTEEMIASMNKDAIVFAMANPVPEIMPDKAKAGGARIVGTGRSDFPNQVNNVLAF PGIFKGALKCRKQITDKMKIAAAYAIAGMIPESELNEENILPKPFQPGIADAVAEAVIKAAEEE
Specific function: In addition to the NAD-dependent oxidative decarboxylation of L-malate, the enzyme catalyzes the decarboxylation of oxaloacetate [H]
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the malic enzymes family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=434, Percent_Identity=26.2672811059908, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI4505145, Length=363, Percent_Identity=25.8953168044077, Blast_Score=82, Evalue=8e-16, Organism=Homo sapiens, GI62420882, Length=363, Percent_Identity=27.2727272727273, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI62420880, Length=363, Percent_Identity=27.2727272727273, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI239049447, Length=363, Percent_Identity=27.2727272727273, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI270265879, Length=373, Percent_Identity=25.201072386059, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI1788806, Length=401, Percent_Identity=49.6259351620948, Blast_Score=355, Evalue=3e-99, Organism=Saccharomyces cerevisiae, GI6322823, Length=393, Percent_Identity=27.4809160305344, Blast_Score=83, Evalue=8e-17, Organism=Drosophila melanogaster, GI281362674, Length=436, Percent_Identity=25.2293577981651, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI21356279, Length=436, Percent_Identity=25.2293577981651, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI281362672, Length=436, Percent_Identity=25.2293577981651, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI78707242, Length=355, Percent_Identity=26.1971830985915, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI78707238, Length=355, Percent_Identity=26.1971830985915, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI78707240, Length=358, Percent_Identity=26.536312849162, Blast_Score=80, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR001891 - InterPro: IPR016040 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M [H]
EC number: =1.1.1.38 [H]
Molecular weight: Translated: 41186; Mature: 41186
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: PS00331 MALIC_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLKEKALKQHELWQGKLEVISKAKVETSEDLSIAYTPGVAEPCRKIAEDPEKVYKYTMK CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHCCHHHHHEEEEC GNTVAVVTDGTAVLGLGDIGPEAALPVMEGKAVLFKEFAGIDAFPICLDTKDVDEIVKAV CCEEEEEECCEEEEEECCCCCCCCCCHHCCCHHHHHHHCCCCCEEEEECCCCHHHHHHHH KYIAPGFGGINLEDISAPRCFEIEERLKAELNIPVFHDDQHGTAIVVLAGIINSLKIVQK HHHCCCCCCCCHHCCCCCCCCCHHHHHHHHCCCCEEECCCCCCEEEEHHHHHHHHHHHHC KPNEMKVVINGAGAAGIAITKLLIKFGFKHIILCDKPGAIYRGADWTNPAQTKIAEITNP CCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCHHHHHHEECCCC DNVKGTLKEVIKGADLFIGVSAPNIVTEEMIASMNKDAIVFAMANPVPEIMPDKAKAGGA CCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCE RIVGTGRSDFPNQVNNVLAFPGIFKGALKCRKQITDKMKIAAAYAIAGMIPESELNEENI EEEECCCCCCCHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC LPKPFQPGIADAVAEAVIKAAEEE CCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MDLKEKALKQHELWQGKLEVISKAKVETSEDLSIAYTPGVAEPCRKIAEDPEKVYKYTMK CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHCCHHHHHEEEEC GNTVAVVTDGTAVLGLGDIGPEAALPVMEGKAVLFKEFAGIDAFPICLDTKDVDEIVKAV CCEEEEEECCEEEEEECCCCCCCCCCHHCCCHHHHHHHCCCCCEEEEECCCCHHHHHHHH KYIAPGFGGINLEDISAPRCFEIEERLKAELNIPVFHDDQHGTAIVVLAGIINSLKIVQK HHHCCCCCCCCHHCCCCCCCCCHHHHHHHHCCCCEEECCCCCCEEEEHHHHHHHHHHHHC KPNEMKVVINGAGAAGIAITKLLIKFGFKHIILCDKPGAIYRGADWTNPAQTKIAEITNP CCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCHHHHHHEECCCC DNVKGTLKEVIKGADLFIGVSAPNIVTEEMIASMNKDAIVFAMANPVPEIMPDKAKAGGA CCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCE RIVGTGRSDFPNQVNNVLAFPGIFKGALKCRKQITDKMKIAAAYAIAGMIPESELNEENI EEEECCCCCCCHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC LPKPFQPGIADAVAEAVIKAAEEE CCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2644282 [H]