| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is mngB [H]
Identifier: 239616883
GI number: 239616883
Start: 512310
End: 514913
Strand: Direct
Name: mngB [H]
Synonym: Kole_0478
Alternate gene names: 239616883
Gene position: 512310-514913 (Clockwise)
Preceding gene: 239616882
Following gene: 239616884
Centisome position: 22.25
GC content: 41.36
Gene sequence:
>2604_bases ATGGAAAAGAAAAAAATAAGAGTACACGTCTTGAGCCACACCCATTGGGACAGAGAATGGTATGCCGCCTTCGAAACTTT CAGAAAGAGGCTCTTAAATCTTATAGACTCACTCATTGAGAATCTTCCAGAAAATCCCCATTTCAAGCATTTCATGTTAG ATGGGCAAACAATCGTTCTTGAAGACTACCTTGAGTTGCGTCATCAAAAAAAAGATGAGTTGGTGGAGTTCATTAGGGAA GGAAAAATATCCGTTGGACCCTGGTATATACTCCCGGATGAATTTCTAATAACAGGCGAAGCCCTGATACGGAATTTTCT TATCGGAAAAAGTGTCCTCGACAAACTTGGAATTGGCGGAAATGTGATGAAAATAGGATACCTTCCTGACATGTTCGGGC ATAGCGCCTATACTCCCGTCATATTGAAAGGTTTAGGATTTGAAGGGGCGGTACTCTGGAGAGGTATTGGCGATAAGTCC AGAAAAACAGAGTTTTTGTGGAAAGCTCCAAATGGTGATGAAATCCTCGTGATCAATTTAATCAGATCCTATTCAAATGG GGCACACTTCGGAAGAGATATTGAACTCATGAAGAGCGTTTTCAAAAAGGAAATAGAAGAACTCTCAAAACACGCTACCA CAGAAAACATATTGATAATGAACGGAACAGATCACGAATTCCCTCTCTTTAATCTTCCTGAGAGGTTCCAGGAATGGTCT GAAGAATTTGGAGCCAAAATAATACACTCATCACTTCAGGAATACCTCAAAAGCGTTAAAAGTCAAAAGCCAGAGCTTAA AACAGTTGAAGGAGAACTAAAAGACCCGAAATACGAACCGGTGCTAAAGGATATAACCTCTACAAGGATATATCTGAAAC TCATGAACTTCGAAGCGCAGTTACTTTACCAGAGGTACCTGGAACCTCTATCCACCCTTTTCTTTAACGAAGAAAACTCC CTGCCCAACGAAATAGAATATGGGTGGAGACTTATCCTGAAATCACAACCTCACGACAGTATCTGTGGTTGTAGTATAGA CAAAGTCCACAGGGATGTTGATCTCAGGCTTTCCAACGCTCTTGAAATTGGTCTTGAAACACTTGGCTCATATCTCAAGA AACTTTCTGACGAGGATACTTCTGAAAACGAAAAAAGCCTGATCGTTTACAATCCATACGAAAGAGAAAGAGTGACAGTC GTAAAAGGTATCGTTGCTCTCGATCCTTCCAAAAATTATGTGGTAGTAGATGAAGAAGGAAACATTTGTGAGACCTCTAT CGAGCCCTTGAACCCGCTTGAAACCGTGGACCTTTTACACCGCGTTGGTGACAACGACTATATCCAGGGAAGTTCCTTCA TTACACAATACATCACTGCGATAAGCCCGAACGTGGCCTTTGGAATCAAGCCTGTGAGAATCTCCTTCATGGCACAGCTT CCGGCAATTGGCTTCAAAAAGTTTACTATCAAGGAATCCGAAATAACCAGATCAGTTGATGATGTATCAACAAACTTCGA GAATAAGTTCTACTACTTCAAATTGAATGAAGACGGCACATTCCAGGCTTTTGACAAGCAGAACAACACCCTCTACGAAA AAATGAACTTCTTTGAAGATGTTGCGGATGCTGGAGATGAATACAATTTCTCCCCAATTCCAGATGATAGAGCAATAGCT TCGCCCAAAAACGTTCGGATGAAGGGAGTGAAAAACAGAGGATTTTCAAAAGAAATAGATCTTCTCGTTGAATACGAGAT TCCTGAAGAACTGACAAACGATAGAAAAGCACGCTCCGAAAGAACTGTCACAGTGCCCATAGAAGTCAAATACATCCTCT TCAGAGATGAACCGAGGATAGACGTGAAGCTTTCACTGCAAAACAACGCAAAAGATCATAAATTAATGGTTGGTTTCCAC TTCCCGGAAAAACTGGATCAGGTTGTCAACGATGGTTATTTTGGGCTTGTAAAACATCCAACGAGTGTTGAACCTGACGA AAGCGCAACTGAAGAAGTTACTTCAAGGTATGCTATGGAAAGTTTTGTTTCTCTTTTAGGTGAAAAAGGAAAACTGCTGA TCACCTCCAGAGGCTTGCATGAATACGAAACACAGATAACAAACGAGGGACTCGATTTGAAGTTGACACTTCTCAGAGCC GTGGGATGGTTATCAAGAGAAGACCTGTTAACAAGAAAAGGACACGCGGGCCCTGGAATCCCAACACCAGAAGCCCAGTG CATAGGCAGGTACAATTACAGATATTCACTAAGGTTCCTTGGTGACGGATCCTCTGAAGAAATGTTCGATGCCTCTCGAA GATTCCTTCTTGATCCGGTACTGATGGAAACATCAGAAGACACGAAGATACCGACGATATCGTTCTTCGAGTTAGAAGAT GGTATTCATTTAAGTGCCCTTAAGATTTCTCAAAATAAAGATGCCGTGATAGCAAGATTTTTGAATGTTTCCAATGTTCC CAGAAAAATTTCTTTCAGGAAAGACGTTGAGATTGTAAATTTAGCGGAAGAACCCACGGGCAAAATTATCAGCGAATTCG TTTTGGAATCCGGTAAAGTGTTGACGGTTAAATCTTCGAAGTAG
Upstream 100 bases:
>100_bases ATATTCGTATTTTGGATTGTTGATAATTTTTGATATACATTAGGTTGTATATACAGGTATATAGAAATATAAATAAGTTG AATGAGTTGGGAGGTTAACC
Downstream 100 bases:
>100_bases GGTGGGGGAGCAGAGCCCCTTAACTAGTAAGAATCTTTCAAAGGGAGGTTGGCATTATGAGAAAGTTTCTGTTTGCGTTG ACGGTAGTGCTGCTGAGCTC
Product: glycoside hydrolase family 38
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 867; Mature: 867
Protein sequence:
>867_residues MEKKKIRVHVLSHTHWDREWYAAFETFRKRLLNLIDSLIENLPENPHFKHFMLDGQTIVLEDYLELRHQKKDELVEFIRE GKISVGPWYILPDEFLITGEALIRNFLIGKSVLDKLGIGGNVMKIGYLPDMFGHSAYTPVILKGLGFEGAVLWRGIGDKS RKTEFLWKAPNGDEILVINLIRSYSNGAHFGRDIELMKSVFKKEIEELSKHATTENILIMNGTDHEFPLFNLPERFQEWS EEFGAKIIHSSLQEYLKSVKSQKPELKTVEGELKDPKYEPVLKDITSTRIYLKLMNFEAQLLYQRYLEPLSTLFFNEENS LPNEIEYGWRLILKSQPHDSICGCSIDKVHRDVDLRLSNALEIGLETLGSYLKKLSDEDTSENEKSLIVYNPYERERVTV VKGIVALDPSKNYVVVDEEGNICETSIEPLNPLETVDLLHRVGDNDYIQGSSFITQYITAISPNVAFGIKPVRISFMAQL PAIGFKKFTIKESEITRSVDDVSTNFENKFYYFKLNEDGTFQAFDKQNNTLYEKMNFFEDVADAGDEYNFSPIPDDRAIA SPKNVRMKGVKNRGFSKEIDLLVEYEIPEELTNDRKARSERTVTVPIEVKYILFRDEPRIDVKLSLQNNAKDHKLMVGFH FPEKLDQVVNDGYFGLVKHPTSVEPDESATEEVTSRYAMESFVSLLGEKGKLLITSRGLHEYETQITNEGLDLKLTLLRA VGWLSREDLLTRKGHAGPGIPTPEAQCIGRYNYRYSLRFLGDGSSEEMFDASRRFLLDPVLMETSEDTKIPTISFFELED GIHLSALKISQNKDAVIARFLNVSNVPRKISFRKDVEIVNLAEEPTGKIISEFVLESGKVLTVKSSK
Sequences:
>Translated_867_residues MEKKKIRVHVLSHTHWDREWYAAFETFRKRLLNLIDSLIENLPENPHFKHFMLDGQTIVLEDYLELRHQKKDELVEFIRE GKISVGPWYILPDEFLITGEALIRNFLIGKSVLDKLGIGGNVMKIGYLPDMFGHSAYTPVILKGLGFEGAVLWRGIGDKS RKTEFLWKAPNGDEILVINLIRSYSNGAHFGRDIELMKSVFKKEIEELSKHATTENILIMNGTDHEFPLFNLPERFQEWS EEFGAKIIHSSLQEYLKSVKSQKPELKTVEGELKDPKYEPVLKDITSTRIYLKLMNFEAQLLYQRYLEPLSTLFFNEENS LPNEIEYGWRLILKSQPHDSICGCSIDKVHRDVDLRLSNALEIGLETLGSYLKKLSDEDTSENEKSLIVYNPYERERVTV VKGIVALDPSKNYVVVDEEGNICETSIEPLNPLETVDLLHRVGDNDYIQGSSFITQYITAISPNVAFGIKPVRISFMAQL PAIGFKKFTIKESEITRSVDDVSTNFENKFYYFKLNEDGTFQAFDKQNNTLYEKMNFFEDVADAGDEYNFSPIPDDRAIA SPKNVRMKGVKNRGFSKEIDLLVEYEIPEELTNDRKARSERTVTVPIEVKYILFRDEPRIDVKLSLQNNAKDHKLMVGFH FPEKLDQVVNDGYFGLVKHPTSVEPDESATEEVTSRYAMESFVSLLGEKGKLLITSRGLHEYETQITNEGLDLKLTLLRA VGWLSREDLLTRKGHAGPGIPTPEAQCIGRYNYRYSLRFLGDGSSEEMFDASRRFLLDPVLMETSEDTKIPTISFFELED GIHLSALKISQNKDAVIARFLNVSNVPRKISFRKDVEIVNLAEEPTGKIISEFVLESGKVLTVKSSK >Mature_867_residues MEKKKIRVHVLSHTHWDREWYAAFETFRKRLLNLIDSLIENLPENPHFKHFMLDGQTIVLEDYLELRHQKKDELVEFIRE GKISVGPWYILPDEFLITGEALIRNFLIGKSVLDKLGIGGNVMKIGYLPDMFGHSAYTPVILKGLGFEGAVLWRGIGDKS RKTEFLWKAPNGDEILVINLIRSYSNGAHFGRDIELMKSVFKKEIEELSKHATTENILIMNGTDHEFPLFNLPERFQEWS EEFGAKIIHSSLQEYLKSVKSQKPELKTVEGELKDPKYEPVLKDITSTRIYLKLMNFEAQLLYQRYLEPLSTLFFNEENS LPNEIEYGWRLILKSQPHDSICGCSIDKVHRDVDLRLSNALEIGLETLGSYLKKLSDEDTSENEKSLIVYNPYERERVTV VKGIVALDPSKNYVVVDEEGNICETSIEPLNPLETVDLLHRVGDNDYIQGSSFITQYITAISPNVAFGIKPVRISFMAQL PAIGFKKFTIKESEITRSVDDVSTNFENKFYYFKLNEDGTFQAFDKQNNTLYEKMNFFEDVADAGDEYNFSPIPDDRAIA SPKNVRMKGVKNRGFSKEIDLLVEYEIPEELTNDRKARSERTVTVPIEVKYILFRDEPRIDVKLSLQNNAKDHKLMVGFH FPEKLDQVVNDGYFGLVKHPTSVEPDESATEEVTSRYAMESFVSLLGEKGKLLITSRGLHEYETQITNEGLDLKLTLLRA VGWLSREDLLTRKGHAGPGIPTPEAQCIGRYNYRYSLRFLGDGSSEEMFDASRRFLLDPVLMETSEDTKIPTISFFELED GIHLSALKISQNKDAVIARFLNVSNVPRKISFRKDVEIVNLAEEPTGKIISEFVLESGKVLTVKSSK
Specific function: May hydrolyze mannosyl-D-glycerate to mannose-6- phosphate and glycerate [H]
COG id: COG0383
COG function: function code G; Alpha-mannosidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 38 family [H]
Homologues:
Organism=Escherichia coli, GI1786952, Length=871, Percent_Identity=28.9322617680827, Blast_Score=324, Evalue=2e-89,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011013 - InterPro: IPR011330 - InterPro: IPR011682 - InterPro: IPR015341 - InterPro: IPR000602 [H]
Pfam domain/function: PF09261 Alpha-mann_mid; PF01074 Glyco_hydro_38; PF07748 Glyco_hydro_38C [H]
EC number: NA
Molecular weight: Translated: 99321; Mature: 99321
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKKKIRVHVLSHTHWDREWYAAFETFRKRLLNLIDSLIENLPENPHFKHFMLDGQTIVL CCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEH EDYLELRHQKKDELVEFIREGKISVGPWYILPDEFLITGEALIRNFLIGKSVLDKLGIGG HHHHHHHHCCHHHHHHHHHCCCCCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCC NVMKIGYLPDMFGHSAYTPVILKGLGFEGAVLWRGIGDKSRKTEFLWKAPNGDEILVINL CEEEEECCCHHCCCCCCCCHHEECCCCCCEEEEECCCCCCCCCEEEEECCCCCCEEEEEE IRSYSNGAHFGRDIELMKSVFKKEIEELSKHATTENILIMNGTDHEFPLFNLPERFQEWS HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHH EEFGAKIIHSSLQEYLKSVKSQKPELKTVEGELKDPKYEPVLKDITSTRIYLKLMNFEAQ HHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHEEEEEEECHHHH LLYQRYLEPLSTLFFNEENSLPNEIEYGWRLILKSQPHDSICGCSIDKVHRDVDLRLSNA HHHHHHHHHHHHHHCCCCCCCCCHHCCCEEEEEECCCCCCCCCCCHHHHHCCHHHHHHHH LEIGLETLGSYLKKLSDEDTSENEKSLIVYNPYERERVTVVKGIVALDPSKNYVVVDEEG HHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCCEEEECCCC NICETSIEPLNPLETVDLLHRVGDNDYIQGSSFITQYITAISPNVAFGIKPVRISFMAQL CEEECCCCCCCHHHHHHHHHHCCCCCEECCHHHHHHHHHHCCCCCEECCCHHEEHHHHHC PAIGFKKFTIKESEITRSVDDVSTNFENKFYYFKLNEDGTFQAFDKQNNTLYEKMNFFED CCCCCEEEEEEHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEECCCCCHHHHHHHHHHH VADAGDEYNFSPIPDDRAIASPKNVRMKGVKNRGFSKEIDLLVEYEIPEELTNDRKARSE HHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEEECCHHHHCHHHHCCC RTVTVPIEVKYILFRDEPRIDVKLSLQNNAKDHKLMVGFHFPEKLDQVVNDGYFGLVKHP CEEEEEEEEEEEEEECCCCEEEEEEECCCCCCCEEEEEECCHHHHHHHHCCCCEEEEECC TSVEPDESATEEVTSRYAMESFVSLLGEKGKLLITSRGLHEYETQITNEGLDLKLTLLRA CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCCEEEHHHHH VGWLSREDLLTRKGHAGPGIPTPEAQCIGRYNYRYSLRFLGDGSSEEMFDASRRFLLDPV HCCCCHHHHHHCCCCCCCCCCCCCHHHEEECCEEEEEEEECCCCCHHHHHHHHHHHHCHH LMETSEDTKIPTISFFELEDGIHLSALKISQNKDAVIARFLNVSNVPRKISFRKDVEIVN HHCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEE LAEEPTGKIISEFVLESGKVLTVKSSK ECCCCHHHHHHHHHHCCCCEEEEECCC >Mature Secondary Structure MEKKKIRVHVLSHTHWDREWYAAFETFRKRLLNLIDSLIENLPENPHFKHFMLDGQTIVL CCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEH EDYLELRHQKKDELVEFIREGKISVGPWYILPDEFLITGEALIRNFLIGKSVLDKLGIGG HHHHHHHHCCHHHHHHHHHCCCCCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCC NVMKIGYLPDMFGHSAYTPVILKGLGFEGAVLWRGIGDKSRKTEFLWKAPNGDEILVINL CEEEEECCCHHCCCCCCCCHHEECCCCCCEEEEECCCCCCCCCEEEEECCCCCCEEEEEE IRSYSNGAHFGRDIELMKSVFKKEIEELSKHATTENILIMNGTDHEFPLFNLPERFQEWS HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHH EEFGAKIIHSSLQEYLKSVKSQKPELKTVEGELKDPKYEPVLKDITSTRIYLKLMNFEAQ HHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHEEEEEEECHHHH LLYQRYLEPLSTLFFNEENSLPNEIEYGWRLILKSQPHDSICGCSIDKVHRDVDLRLSNA HHHHHHHHHHHHHHCCCCCCCCCHHCCCEEEEEECCCCCCCCCCCHHHHHCCHHHHHHHH LEIGLETLGSYLKKLSDEDTSENEKSLIVYNPYERERVTVVKGIVALDPSKNYVVVDEEG HHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCCEEEECCCC NICETSIEPLNPLETVDLLHRVGDNDYIQGSSFITQYITAISPNVAFGIKPVRISFMAQL CEEECCCCCCCHHHHHHHHHHCCCCCEECCHHHHHHHHHHCCCCCEECCCHHEEHHHHHC PAIGFKKFTIKESEITRSVDDVSTNFENKFYYFKLNEDGTFQAFDKQNNTLYEKMNFFED CCCCCEEEEEEHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEECCCCCHHHHHHHHHHH VADAGDEYNFSPIPDDRAIASPKNVRMKGVKNRGFSKEIDLLVEYEIPEELTNDRKARSE HHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEEECCHHHHCHHHHCCC RTVTVPIEVKYILFRDEPRIDVKLSLQNNAKDHKLMVGFHFPEKLDQVVNDGYFGLVKHP CEEEEEEEEEEEEEECCCCEEEEEEECCCCCCCEEEEEECCHHHHHHHHCCCCEEEEECC TSVEPDESATEEVTSRYAMESFVSLLGEKGKLLITSRGLHEYETQITNEGLDLKLTLLRA CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCCEEEHHHHH VGWLSREDLLTRKGHAGPGIPTPEAQCIGRYNYRYSLRFLGDGSSEEMFDASRRFLLDPV HCCCCHHHHHHCCCCCCCCCCCCCHHHEEECCEEEEEEEECCCCCHHHHHHHHHHHHCHH LMETSEDTKIPTISFFELEDGIHLSALKISQNKDAVIARFLNVSNVPRKISFRKDVEIVN HHCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEE LAEEPTGKIISEFVLESGKVLTVKSSK ECCCCHHHHHHHHHHCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 9063979 [H]