Definition Kosmotoga olearia TBF 19.5.1, complete genome.
Accession NC_012785
Length 2,302,126

Click here to switch to the map view.

The map label for this gene is malE [H]

Identifier: 239616884

GI number: 239616884

Start: 514970

End: 516238

Strand: Direct

Name: malE [H]

Synonym: Kole_0479

Alternate gene names: 239616884

Gene position: 514970-516238 (Clockwise)

Preceding gene: 239616883

Following gene: 239616885

Centisome position: 22.37

GC content: 45.94

Gene sequence:

>1269_bases
ATGAGAAAGTTTCTGTTTGCGTTGACGGTAGTGCTGCTGAGCTCTATCGTCCTGGCAGGAACCGTGGAGGTTGTTTTCTG
GCACAACATGTCGAACCCTGTCGACAAGAGAGCTATCGATGAAATTGTACAGAAATTTAACGAAACGCATCCAAACATCA
AAGTGAAAGTAGTCCTTGTACCAGGAAGTGAAACAGAGGTCACCAAGCTCATGACGGCAGTAGCAGCGGGAACTGGTCCC
GATGTTTACTACCTTGATAGGTTTACCGTCGCTCAAAGAGCTCATCAGGGAGTTTTAGAACCTCTTGAGGATTATCTAGA
AAGTATTGGGATAGACACAACAGAGCTGAGGTCCCAATTCTTCAAGTTCTCCGTAGACGAAGCAAGCTACAATGGAAAGC
TCTACGCTCTTCCATGGGATACTGATGTCAGAGTCCTGTACTACAACAAAAAACTTTTCAGGGAAGCCGGTCTCGACCCT
GATAAACCACCGGTAACGATCGATGAACTTGACGAATACGCCGAAAAACTAACTATAAAACAAGGCAACAGATATGTTCA
GCTAGGATTCGTTCCATGGTTCGGTCAAGGATGGCATTATACCTGGGGTTGGGCCTTCGGTGGAAAGTTTTATGATGAAA
AAACCCAGAAGCTTACTTTCGCCAACGATCCCAAGATCATAGAGTCCTTCAAGTGGCAGAAAAAATACGCTGACAAGTAT
GGTATGAAAAACCTTGGTGCCTTCTTCTCTATGTTCGGTGCAGAAATAAATCCATTCATAGGTGGAAAGCTTGCCATGGT
TGTGGACGGTAATTGGTTCCTTGCACAGATTAGAAACTTTGCTCCGAAAGACTTTGAATACGGTGTGGCTCCAATACCGT
ATCCTCCCTATGGCGAACCCAACAGCACCTGGGCTGGTGGCTGGAGTCTTGTTATCCCCAAAGGAGCAAAACATCCAAAA
GAAGCTGCCGAATTTATTCTGTACATGGCTACTGAAGGACAGACCATATACGCAGTTAAGTCCGGACATCTTCCGACTTA
CAAAGCCGCACTTCCAAAGTTAATTGAAAGCGATCCTGCACAAGAGGCATTCGCAGAAATCCTCCCGACAGCTCATTGTA
GGCCTGTTATTCCCGTGGGAGCTCTCCTGTGGGACAAACTTACTGAAGCGAGAGAATACATACTCTGGGGAAAGAAACCT
GTTGAACAGGCTCTCATGGATGCTCAGATTGAGGTCCAGGAAGCTCTTGACAAAGCTCTTGGAAAGTAA

Upstream 100 bases:

>100_bases
TTTTGGAATCCGGTAAAGTGTTGACGGTTAAATCTTCGAAGTAGGGTGGGGGAGCAGAGCCCCTTAACTAGTAAGAATCT
TTCAAAGGGAGGTTGGCATT

Downstream 100 bases:

>100_bases
TGTTTGAAAATAAAGTTGGCTCTCTCTACCGAGAGAGCCAACTTTTCTACTTAATTGTAAAACGAAGTTTGTGTTTACAG
CCAAAAATATGTTTCACCGT

Product: extracellular solute-binding protein family 1

Products: NA

Alternate protein names: MMBP; Maltodextrin-binding protein [H]

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MRKFLFALTVVLLSSIVLAGTVEVVFWHNMSNPVDKRAIDEIVQKFNETHPNIKVKVVLVPGSETEVTKLMTAVAAGTGP
DVYYLDRFTVAQRAHQGVLEPLEDYLESIGIDTTELRSQFFKFSVDEASYNGKLYALPWDTDVRVLYYNKKLFREAGLDP
DKPPVTIDELDEYAEKLTIKQGNRYVQLGFVPWFGQGWHYTWGWAFGGKFYDEKTQKLTFANDPKIIESFKWQKKYADKY
GMKNLGAFFSMFGAEINPFIGGKLAMVVDGNWFLAQIRNFAPKDFEYGVAPIPYPPYGEPNSTWAGGWSLVIPKGAKHPK
EAAEFILYMATEGQTIYAVKSGHLPTYKAALPKLIESDPAQEAFAEILPTAHCRPVIPVGALLWDKLTEAREYILWGKKP
VEQALMDAQIEVQEALDKALGK

Sequences:

>Translated_422_residues
MRKFLFALTVVLLSSIVLAGTVEVVFWHNMSNPVDKRAIDEIVQKFNETHPNIKVKVVLVPGSETEVTKLMTAVAAGTGP
DVYYLDRFTVAQRAHQGVLEPLEDYLESIGIDTTELRSQFFKFSVDEASYNGKLYALPWDTDVRVLYYNKKLFREAGLDP
DKPPVTIDELDEYAEKLTIKQGNRYVQLGFVPWFGQGWHYTWGWAFGGKFYDEKTQKLTFANDPKIIESFKWQKKYADKY
GMKNLGAFFSMFGAEINPFIGGKLAMVVDGNWFLAQIRNFAPKDFEYGVAPIPYPPYGEPNSTWAGGWSLVIPKGAKHPK
EAAEFILYMATEGQTIYAVKSGHLPTYKAALPKLIESDPAQEAFAEILPTAHCRPVIPVGALLWDKLTEAREYILWGKKP
VEQALMDAQIEVQEALDKALGK
>Mature_422_residues
MRKFLFALTVVLLSSIVLAGTVEVVFWHNMSNPVDKRAIDEIVQKFNETHPNIKVKVVLVPGSETEVTKLMTAVAAGTGP
DVYYLDRFTVAQRAHQGVLEPLEDYLESIGIDTTELRSQFFKFSVDEASYNGKLYALPWDTDVRVLYYNKKLFREAGLDP
DKPPVTIDELDEYAEKLTIKQGNRYVQLGFVPWFGQGWHYTWGWAFGGKFYDEKTQKLTFANDPKIIESFKWQKKYADKY
GMKNLGAFFSMFGAEINPFIGGKLAMVVDGNWFLAQIRNFAPKDFEYGVAPIPYPPYGEPNSTWAGGWSLVIPKGAKHPK
EAAEFILYMATEGQTIYAVKSGHLPTYKAALPKLIESDPAQEAFAEILPTAHCRPVIPVGALLWDKLTEAREYILWGKKP
VEQALMDAQIEVQEALDKALGK

Specific function: Involved in an abc transport system for maltotriose [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=345, Percent_Identity=28.1159420289855, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006060
- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47631; Mature: 47631

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKFLFALTVVLLSSIVLAGTVEVVFWHNMSNPVDKRAIDEIVQKFNETHPNIKVKVVLV
CHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEE
PGSETEVTKLMTAVAAGTGPDVYYLDRFTVAQRAHQGVLEPLEDYLESIGIDTTELRSQF
CCCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
FKFSVDEASYNGKLYALPWDTDVRVLYYNKKLFREAGLDPDKPPVTIDELDEYAEKLTIK
HEEECCCCCCCCEEEEECCCCCEEEEEECHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC
QGNRYVQLGFVPWFGQGWHYTWGWAFGGKFYDEKTQKLTFANDPKIIESFKWQKKYADKY
CCCEEEEEEEEEECCCCCCEEEEEECCCCHHCCHHCEEEECCCCHHHHHHHHHHHHHHHC
GMKNLGAFFSMFGAEINPFIGGKLAMVVDGNWFLAQIRNFAPKDFEYGVAPIPYPPYGEP
CHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC
NSTWAGGWSLVIPKGAKHPKEAAEFILYMATEGQTIYAVKSGHLPTYKAALPKLIESDPA
CCCCCCCEEEEECCCCCCHHHHHHEEEEEECCCCEEEEEECCCCCHHHHHHHHHHCCCCH
QEAFAEILPTAHCRPVIPVGALLWDKLTEAREYILWGKKPVEQALMDAQIEVQEALDKAL
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
GK
CC
>Mature Secondary Structure
MRKFLFALTVVLLSSIVLAGTVEVVFWHNMSNPVDKRAIDEIVQKFNETHPNIKVKVVLV
CHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEE
PGSETEVTKLMTAVAAGTGPDVYYLDRFTVAQRAHQGVLEPLEDYLESIGIDTTELRSQF
CCCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
FKFSVDEASYNGKLYALPWDTDVRVLYYNKKLFREAGLDPDKPPVTIDELDEYAEKLTIK
HEEECCCCCCCCEEEEECCCCCEEEEEECHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC
QGNRYVQLGFVPWFGQGWHYTWGWAFGGKFYDEKTQKLTFANDPKIIESFKWQKKYADKY
CCCEEEEEEEEEECCCCCCEEEEEECCCCHHCCHHCEEEECCCCHHHHHHHHHHHHHHHC
GMKNLGAFFSMFGAEINPFIGGKLAMVVDGNWFLAQIRNFAPKDFEYGVAPIPYPPYGEP
CHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC
NSTWAGGWSLVIPKGAKHPKEAAEFILYMATEGQTIYAVKSGHLPTYKAALPKLIESDPA
CCCCCCCEEEEECCCCCCHHHHHHEEEEEECCCCEEEEEECCCCCHHHHHHHHHHCCCCH
QEAFAEILPTAHCRPVIPVGALLWDKLTEAREYILWGKKPVEQALMDAQIEVQEALDKAL
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
GK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]