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The map label for this gene is yqhM [H]

Identifier: 239616882

GI number: 239616882

Start: 511281

End: 512123

Strand: Direct

Name: yqhM [H]

Synonym: Kole_0477

Alternate gene names: 239616882

Gene position: 511281-512123 (Clockwise)

Preceding gene: 239616881

Following gene: 239616883

Centisome position: 22.21

GC content: 45.43

Gene sequence:

>843_bases
ATGGATAACGAATGGAGATTTATACAGACAGGTTTTCAAGATGGTGCCATGAACATGGCTATTGACGAAGCAATACTTAT
TTTTCACAGCAAGGGTTTGGTTCCGCCAACCCTTCGTTTTTATGGGTGGTCTCCACCGGCTTTTTCACTGGGTTATTTTC
AGAAAGTGGAAAGAGTAGTAGATCTAGAAAAATGCCGTTTAGCCGGTGTGGACTGCGTTCGCCGGATTACAGGCGGAAGA
GCTGTTTTCCATGACAAAGAGCTGACATATAGCGTTATTGCATCCCAGCGATTGCCACAGGTATCTGGCAGAGTCATCGA
ATCCTATCTCAAACTCAGTAAAGGCCTCCTGGAAGGGTTAGCTTTGCTGGGCATCCCGGCAAAAATGGTTGAGAAACCGA
GCAAGAAACGGCACACAACAGCGGCTTGCTTCGATGCGCCTTCCTGGTACGAACTCGTAGTAGATGGGAAAAAACTGGTG
GGCAGCGCCCAAACCAGAAAGTTCGGTTGCGTTCTTCAACACGGTGCCATCCTTTTAGATCTCGATGTGGACAAGATGTT
TGAGCTCATGGCTTTTTCAAACGAAGCACTTCGCAACCGGCAGAAAGAGATTTTTCAGAAAAAAGCCTGCACTATCAAAA
GTGTCCTGGGCCGTGAAGTTACCTATGACGAGATTTCTCAAGTAATATTAACTGGGTTTAAGAAATCGCTGGGAGTAAAA
CTCGTACCGAGTGAACTCACCGACAAAGAACTAAAATTAGCCTCTAAACTTCGAGAGGAAAAATACTCACGGCTTGATTG
GTCTTCGCTAGACTCTATGAAAATCCCTGACCTCCAAATTTAA

Upstream 100 bases:

>100_bases
GTCCGATGTACAACTACCCACGCCCTTTAACACCTGACGAAATAACAAAAGCAATAGCCGAACTGAAAATAAAGCTTTAA
GCAAGAGAGGGAAAAGAGAT

Downstream 100 bases:

>100_bases
GTTTATAAACTATTCAAAAAATTTAGTAACCAGAAGAATATTCGCTATAATCTCCTATGTTTTGGATTATTGCGAATATC
CTGCCAATATTCGTATTTTG

Product: biotin/lipoate A/B protein ligase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MDNEWRFIQTGFQDGAMNMAIDEAILIFHSKGLVPPTLRFYGWSPPAFSLGYFQKVERVVDLEKCRLAGVDCVRRITGGR
AVFHDKELTYSVIASQRLPQVSGRVIESYLKLSKGLLEGLALLGIPAKMVEKPSKKRHTTAACFDAPSWYELVVDGKKLV
GSAQTRKFGCVLQHGAILLDLDVDKMFELMAFSNEALRNRQKEIFQKKACTIKSVLGREVTYDEISQVILTGFKKSLGVK
LVPSELTDKELKLASKLREEKYSRLDWSSLDSMKIPDLQI

Sequences:

>Translated_280_residues
MDNEWRFIQTGFQDGAMNMAIDEAILIFHSKGLVPPTLRFYGWSPPAFSLGYFQKVERVVDLEKCRLAGVDCVRRITGGR
AVFHDKELTYSVIASQRLPQVSGRVIESYLKLSKGLLEGLALLGIPAKMVEKPSKKRHTTAACFDAPSWYELVVDGKKLV
GSAQTRKFGCVLQHGAILLDLDVDKMFELMAFSNEALRNRQKEIFQKKACTIKSVLGREVTYDEISQVILTGFKKSLGVK
LVPSELTDKELKLASKLREEKYSRLDWSSLDSMKIPDLQI
>Mature_280_residues
MDNEWRFIQTGFQDGAMNMAIDEAILIFHSKGLVPPTLRFYGWSPPAFSLGYFQKVERVVDLEKCRLAGVDCVRRITGGR
AVFHDKELTYSVIASQRLPQVSGRVIESYLKLSKGLLEGLALLGIPAKMVEKPSKKRHTTAACFDAPSWYELVVDGKKLV
GSAQTRKFGCVLQHGAILLDLDVDKMFELMAFSNEALRNRQKEIFQKKACTIKSVLGREVTYDEISQVILTGFKKSLGVK
LVPSELTDKELKLASKLREEKYSRLDWSSLDSMKIPDLQI

Specific function: Unknown

COG id: COG0095

COG function: function code H; Lipoate-protein ligase A

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004143 [H]

Pfam domain/function: PF03099 BPL_LipA_LipB [H]

EC number: NA

Molecular weight: Translated: 31566; Mature: 31566

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNEWRFIQTGFQDGAMNMAIDEAILIFHSKGLVPPTLRFYGWSPPAFSLGYFQKVERVV
CCCCCEEEECCCCCCCCHHHHHHEEEEEECCCCCCCCHHHCCCCCCCCHHHHHHHHHHHH
DLEKCRLAGVDCVRRITGGRAVFHDKELTYSVIASQRLPQVSGRVIESYLKLSKGLLEGL
HHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
ALLGIPAKMVEKPSKKRHTTAACFDAPSWYELVVDGKKLVGSAQTRKFGCVLQHGAILLD
HHHCCCHHHHCCCCHHHCCHHHHCCCCCHHHEEECCHHHHCCHHHHHHHHEEECCCEEEE
LDVDKMFELMAFSNEALRNRQKEIFQKKACTIKSVLGREVTYDEISQVILTGFKKSLGVK
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCE
LVPSELTDKELKLASKLREEKYSRLDWSSLDSMKIPDLQI
ECCCHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDNEWRFIQTGFQDGAMNMAIDEAILIFHSKGLVPPTLRFYGWSPPAFSLGYFQKVERVV
CCCCCEEEECCCCCCCCHHHHHHEEEEEECCCCCCCCHHHCCCCCCCCHHHHHHHHHHHH
DLEKCRLAGVDCVRRITGGRAVFHDKELTYSVIASQRLPQVSGRVIESYLKLSKGLLEGL
HHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
ALLGIPAKMVEKPSKKRHTTAACFDAPSWYELVVDGKKLVGSAQTRKFGCVLQHGAILLD
HHHCCCHHHHCCCCHHHCCHHHHCCCCCHHHEEECCHHHHCCHHHHHHHHEEECCCEEEE
LDVDKMFELMAFSNEALRNRQKEIFQKKACTIKSVLGREVTYDEISQVILTGFKKSLGVK
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCE
LVPSELTDKELKLASKLREEKYSRLDWSSLDSMKIPDLQI
ECCCHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]