Definition Kosmotoga olearia TBF 19.5.1, complete genome.
Accession NC_012785
Length 2,302,126

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The map label for this gene is mngB [H]

Identifier: 239616883

GI number: 239616883

Start: 512310

End: 514913

Strand: Direct

Name: mngB [H]

Synonym: Kole_0478

Alternate gene names: 239616883

Gene position: 512310-514913 (Clockwise)

Preceding gene: 239616882

Following gene: 239616884

Centisome position: 22.25

GC content: 41.36

Gene sequence:

>2604_bases
ATGGAAAAGAAAAAAATAAGAGTACACGTCTTGAGCCACACCCATTGGGACAGAGAATGGTATGCCGCCTTCGAAACTTT
CAGAAAGAGGCTCTTAAATCTTATAGACTCACTCATTGAGAATCTTCCAGAAAATCCCCATTTCAAGCATTTCATGTTAG
ATGGGCAAACAATCGTTCTTGAAGACTACCTTGAGTTGCGTCATCAAAAAAAAGATGAGTTGGTGGAGTTCATTAGGGAA
GGAAAAATATCCGTTGGACCCTGGTATATACTCCCGGATGAATTTCTAATAACAGGCGAAGCCCTGATACGGAATTTTCT
TATCGGAAAAAGTGTCCTCGACAAACTTGGAATTGGCGGAAATGTGATGAAAATAGGATACCTTCCTGACATGTTCGGGC
ATAGCGCCTATACTCCCGTCATATTGAAAGGTTTAGGATTTGAAGGGGCGGTACTCTGGAGAGGTATTGGCGATAAGTCC
AGAAAAACAGAGTTTTTGTGGAAAGCTCCAAATGGTGATGAAATCCTCGTGATCAATTTAATCAGATCCTATTCAAATGG
GGCACACTTCGGAAGAGATATTGAACTCATGAAGAGCGTTTTCAAAAAGGAAATAGAAGAACTCTCAAAACACGCTACCA
CAGAAAACATATTGATAATGAACGGAACAGATCACGAATTCCCTCTCTTTAATCTTCCTGAGAGGTTCCAGGAATGGTCT
GAAGAATTTGGAGCCAAAATAATACACTCATCACTTCAGGAATACCTCAAAAGCGTTAAAAGTCAAAAGCCAGAGCTTAA
AACAGTTGAAGGAGAACTAAAAGACCCGAAATACGAACCGGTGCTAAAGGATATAACCTCTACAAGGATATATCTGAAAC
TCATGAACTTCGAAGCGCAGTTACTTTACCAGAGGTACCTGGAACCTCTATCCACCCTTTTCTTTAACGAAGAAAACTCC
CTGCCCAACGAAATAGAATATGGGTGGAGACTTATCCTGAAATCACAACCTCACGACAGTATCTGTGGTTGTAGTATAGA
CAAAGTCCACAGGGATGTTGATCTCAGGCTTTCCAACGCTCTTGAAATTGGTCTTGAAACACTTGGCTCATATCTCAAGA
AACTTTCTGACGAGGATACTTCTGAAAACGAAAAAAGCCTGATCGTTTACAATCCATACGAAAGAGAAAGAGTGACAGTC
GTAAAAGGTATCGTTGCTCTCGATCCTTCCAAAAATTATGTGGTAGTAGATGAAGAAGGAAACATTTGTGAGACCTCTAT
CGAGCCCTTGAACCCGCTTGAAACCGTGGACCTTTTACACCGCGTTGGTGACAACGACTATATCCAGGGAAGTTCCTTCA
TTACACAATACATCACTGCGATAAGCCCGAACGTGGCCTTTGGAATCAAGCCTGTGAGAATCTCCTTCATGGCACAGCTT
CCGGCAATTGGCTTCAAAAAGTTTACTATCAAGGAATCCGAAATAACCAGATCAGTTGATGATGTATCAACAAACTTCGA
GAATAAGTTCTACTACTTCAAATTGAATGAAGACGGCACATTCCAGGCTTTTGACAAGCAGAACAACACCCTCTACGAAA
AAATGAACTTCTTTGAAGATGTTGCGGATGCTGGAGATGAATACAATTTCTCCCCAATTCCAGATGATAGAGCAATAGCT
TCGCCCAAAAACGTTCGGATGAAGGGAGTGAAAAACAGAGGATTTTCAAAAGAAATAGATCTTCTCGTTGAATACGAGAT
TCCTGAAGAACTGACAAACGATAGAAAAGCACGCTCCGAAAGAACTGTCACAGTGCCCATAGAAGTCAAATACATCCTCT
TCAGAGATGAACCGAGGATAGACGTGAAGCTTTCACTGCAAAACAACGCAAAAGATCATAAATTAATGGTTGGTTTCCAC
TTCCCGGAAAAACTGGATCAGGTTGTCAACGATGGTTATTTTGGGCTTGTAAAACATCCAACGAGTGTTGAACCTGACGA
AAGCGCAACTGAAGAAGTTACTTCAAGGTATGCTATGGAAAGTTTTGTTTCTCTTTTAGGTGAAAAAGGAAAACTGCTGA
TCACCTCCAGAGGCTTGCATGAATACGAAACACAGATAACAAACGAGGGACTCGATTTGAAGTTGACACTTCTCAGAGCC
GTGGGATGGTTATCAAGAGAAGACCTGTTAACAAGAAAAGGACACGCGGGCCCTGGAATCCCAACACCAGAAGCCCAGTG
CATAGGCAGGTACAATTACAGATATTCACTAAGGTTCCTTGGTGACGGATCCTCTGAAGAAATGTTCGATGCCTCTCGAA
GATTCCTTCTTGATCCGGTACTGATGGAAACATCAGAAGACACGAAGATACCGACGATATCGTTCTTCGAGTTAGAAGAT
GGTATTCATTTAAGTGCCCTTAAGATTTCTCAAAATAAAGATGCCGTGATAGCAAGATTTTTGAATGTTTCCAATGTTCC
CAGAAAAATTTCTTTCAGGAAAGACGTTGAGATTGTAAATTTAGCGGAAGAACCCACGGGCAAAATTATCAGCGAATTCG
TTTTGGAATCCGGTAAAGTGTTGACGGTTAAATCTTCGAAGTAG

Upstream 100 bases:

>100_bases
ATATTCGTATTTTGGATTGTTGATAATTTTTGATATACATTAGGTTGTATATACAGGTATATAGAAATATAAATAAGTTG
AATGAGTTGGGAGGTTAACC

Downstream 100 bases:

>100_bases
GGTGGGGGAGCAGAGCCCCTTAACTAGTAAGAATCTTTCAAAGGGAGGTTGGCATTATGAGAAAGTTTCTGTTTGCGTTG
ACGGTAGTGCTGCTGAGCTC

Product: glycoside hydrolase family 38

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 867; Mature: 867

Protein sequence:

>867_residues
MEKKKIRVHVLSHTHWDREWYAAFETFRKRLLNLIDSLIENLPENPHFKHFMLDGQTIVLEDYLELRHQKKDELVEFIRE
GKISVGPWYILPDEFLITGEALIRNFLIGKSVLDKLGIGGNVMKIGYLPDMFGHSAYTPVILKGLGFEGAVLWRGIGDKS
RKTEFLWKAPNGDEILVINLIRSYSNGAHFGRDIELMKSVFKKEIEELSKHATTENILIMNGTDHEFPLFNLPERFQEWS
EEFGAKIIHSSLQEYLKSVKSQKPELKTVEGELKDPKYEPVLKDITSTRIYLKLMNFEAQLLYQRYLEPLSTLFFNEENS
LPNEIEYGWRLILKSQPHDSICGCSIDKVHRDVDLRLSNALEIGLETLGSYLKKLSDEDTSENEKSLIVYNPYERERVTV
VKGIVALDPSKNYVVVDEEGNICETSIEPLNPLETVDLLHRVGDNDYIQGSSFITQYITAISPNVAFGIKPVRISFMAQL
PAIGFKKFTIKESEITRSVDDVSTNFENKFYYFKLNEDGTFQAFDKQNNTLYEKMNFFEDVADAGDEYNFSPIPDDRAIA
SPKNVRMKGVKNRGFSKEIDLLVEYEIPEELTNDRKARSERTVTVPIEVKYILFRDEPRIDVKLSLQNNAKDHKLMVGFH
FPEKLDQVVNDGYFGLVKHPTSVEPDESATEEVTSRYAMESFVSLLGEKGKLLITSRGLHEYETQITNEGLDLKLTLLRA
VGWLSREDLLTRKGHAGPGIPTPEAQCIGRYNYRYSLRFLGDGSSEEMFDASRRFLLDPVLMETSEDTKIPTISFFELED
GIHLSALKISQNKDAVIARFLNVSNVPRKISFRKDVEIVNLAEEPTGKIISEFVLESGKVLTVKSSK

Sequences:

>Translated_867_residues
MEKKKIRVHVLSHTHWDREWYAAFETFRKRLLNLIDSLIENLPENPHFKHFMLDGQTIVLEDYLELRHQKKDELVEFIRE
GKISVGPWYILPDEFLITGEALIRNFLIGKSVLDKLGIGGNVMKIGYLPDMFGHSAYTPVILKGLGFEGAVLWRGIGDKS
RKTEFLWKAPNGDEILVINLIRSYSNGAHFGRDIELMKSVFKKEIEELSKHATTENILIMNGTDHEFPLFNLPERFQEWS
EEFGAKIIHSSLQEYLKSVKSQKPELKTVEGELKDPKYEPVLKDITSTRIYLKLMNFEAQLLYQRYLEPLSTLFFNEENS
LPNEIEYGWRLILKSQPHDSICGCSIDKVHRDVDLRLSNALEIGLETLGSYLKKLSDEDTSENEKSLIVYNPYERERVTV
VKGIVALDPSKNYVVVDEEGNICETSIEPLNPLETVDLLHRVGDNDYIQGSSFITQYITAISPNVAFGIKPVRISFMAQL
PAIGFKKFTIKESEITRSVDDVSTNFENKFYYFKLNEDGTFQAFDKQNNTLYEKMNFFEDVADAGDEYNFSPIPDDRAIA
SPKNVRMKGVKNRGFSKEIDLLVEYEIPEELTNDRKARSERTVTVPIEVKYILFRDEPRIDVKLSLQNNAKDHKLMVGFH
FPEKLDQVVNDGYFGLVKHPTSVEPDESATEEVTSRYAMESFVSLLGEKGKLLITSRGLHEYETQITNEGLDLKLTLLRA
VGWLSREDLLTRKGHAGPGIPTPEAQCIGRYNYRYSLRFLGDGSSEEMFDASRRFLLDPVLMETSEDTKIPTISFFELED
GIHLSALKISQNKDAVIARFLNVSNVPRKISFRKDVEIVNLAEEPTGKIISEFVLESGKVLTVKSSK
>Mature_867_residues
MEKKKIRVHVLSHTHWDREWYAAFETFRKRLLNLIDSLIENLPENPHFKHFMLDGQTIVLEDYLELRHQKKDELVEFIRE
GKISVGPWYILPDEFLITGEALIRNFLIGKSVLDKLGIGGNVMKIGYLPDMFGHSAYTPVILKGLGFEGAVLWRGIGDKS
RKTEFLWKAPNGDEILVINLIRSYSNGAHFGRDIELMKSVFKKEIEELSKHATTENILIMNGTDHEFPLFNLPERFQEWS
EEFGAKIIHSSLQEYLKSVKSQKPELKTVEGELKDPKYEPVLKDITSTRIYLKLMNFEAQLLYQRYLEPLSTLFFNEENS
LPNEIEYGWRLILKSQPHDSICGCSIDKVHRDVDLRLSNALEIGLETLGSYLKKLSDEDTSENEKSLIVYNPYERERVTV
VKGIVALDPSKNYVVVDEEGNICETSIEPLNPLETVDLLHRVGDNDYIQGSSFITQYITAISPNVAFGIKPVRISFMAQL
PAIGFKKFTIKESEITRSVDDVSTNFENKFYYFKLNEDGTFQAFDKQNNTLYEKMNFFEDVADAGDEYNFSPIPDDRAIA
SPKNVRMKGVKNRGFSKEIDLLVEYEIPEELTNDRKARSERTVTVPIEVKYILFRDEPRIDVKLSLQNNAKDHKLMVGFH
FPEKLDQVVNDGYFGLVKHPTSVEPDESATEEVTSRYAMESFVSLLGEKGKLLITSRGLHEYETQITNEGLDLKLTLLRA
VGWLSREDLLTRKGHAGPGIPTPEAQCIGRYNYRYSLRFLGDGSSEEMFDASRRFLLDPVLMETSEDTKIPTISFFELED
GIHLSALKISQNKDAVIARFLNVSNVPRKISFRKDVEIVNLAEEPTGKIISEFVLESGKVLTVKSSK

Specific function: May hydrolyze mannosyl-D-glycerate to mannose-6- phosphate and glycerate [H]

COG id: COG0383

COG function: function code G; Alpha-mannosidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 38 family [H]

Homologues:

Organism=Escherichia coli, GI1786952, Length=871, Percent_Identity=28.9322617680827, Blast_Score=324, Evalue=2e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011013
- InterPro:   IPR011330
- InterPro:   IPR011682
- InterPro:   IPR015341
- InterPro:   IPR000602 [H]

Pfam domain/function: PF09261 Alpha-mann_mid; PF01074 Glyco_hydro_38; PF07748 Glyco_hydro_38C [H]

EC number: NA

Molecular weight: Translated: 99321; Mature: 99321

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKKKIRVHVLSHTHWDREWYAAFETFRKRLLNLIDSLIENLPENPHFKHFMLDGQTIVL
CCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEH
EDYLELRHQKKDELVEFIREGKISVGPWYILPDEFLITGEALIRNFLIGKSVLDKLGIGG
HHHHHHHHCCHHHHHHHHHCCCCCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCC
NVMKIGYLPDMFGHSAYTPVILKGLGFEGAVLWRGIGDKSRKTEFLWKAPNGDEILVINL
CEEEEECCCHHCCCCCCCCHHEECCCCCCEEEEECCCCCCCCCEEEEECCCCCCEEEEEE
IRSYSNGAHFGRDIELMKSVFKKEIEELSKHATTENILIMNGTDHEFPLFNLPERFQEWS
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHH
EEFGAKIIHSSLQEYLKSVKSQKPELKTVEGELKDPKYEPVLKDITSTRIYLKLMNFEAQ
HHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHEEEEEEECHHHH
LLYQRYLEPLSTLFFNEENSLPNEIEYGWRLILKSQPHDSICGCSIDKVHRDVDLRLSNA
HHHHHHHHHHHHHHCCCCCCCCCHHCCCEEEEEECCCCCCCCCCCHHHHHCCHHHHHHHH
LEIGLETLGSYLKKLSDEDTSENEKSLIVYNPYERERVTVVKGIVALDPSKNYVVVDEEG
HHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCCEEEECCCC
NICETSIEPLNPLETVDLLHRVGDNDYIQGSSFITQYITAISPNVAFGIKPVRISFMAQL
CEEECCCCCCCHHHHHHHHHHCCCCCEECCHHHHHHHHHHCCCCCEECCCHHEEHHHHHC
PAIGFKKFTIKESEITRSVDDVSTNFENKFYYFKLNEDGTFQAFDKQNNTLYEKMNFFED
CCCCCEEEEEEHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEECCCCCHHHHHHHHHHH
VADAGDEYNFSPIPDDRAIASPKNVRMKGVKNRGFSKEIDLLVEYEIPEELTNDRKARSE
HHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEEECCHHHHCHHHHCCC
RTVTVPIEVKYILFRDEPRIDVKLSLQNNAKDHKLMVGFHFPEKLDQVVNDGYFGLVKHP
CEEEEEEEEEEEEEECCCCEEEEEEECCCCCCCEEEEEECCHHHHHHHHCCCCEEEEECC
TSVEPDESATEEVTSRYAMESFVSLLGEKGKLLITSRGLHEYETQITNEGLDLKLTLLRA
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCCEEEHHHHH
VGWLSREDLLTRKGHAGPGIPTPEAQCIGRYNYRYSLRFLGDGSSEEMFDASRRFLLDPV
HCCCCHHHHHHCCCCCCCCCCCCCHHHEEECCEEEEEEEECCCCCHHHHHHHHHHHHCHH
LMETSEDTKIPTISFFELEDGIHLSALKISQNKDAVIARFLNVSNVPRKISFRKDVEIVN
HHCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEE
LAEEPTGKIISEFVLESGKVLTVKSSK
ECCCCHHHHHHHHHHCCCCEEEEECCC
>Mature Secondary Structure
MEKKKIRVHVLSHTHWDREWYAAFETFRKRLLNLIDSLIENLPENPHFKHFMLDGQTIVL
CCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEH
EDYLELRHQKKDELVEFIREGKISVGPWYILPDEFLITGEALIRNFLIGKSVLDKLGIGG
HHHHHHHHCCHHHHHHHHHCCCCCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCC
NVMKIGYLPDMFGHSAYTPVILKGLGFEGAVLWRGIGDKSRKTEFLWKAPNGDEILVINL
CEEEEECCCHHCCCCCCCCHHEECCCCCCEEEEECCCCCCCCCEEEEECCCCCCEEEEEE
IRSYSNGAHFGRDIELMKSVFKKEIEELSKHATTENILIMNGTDHEFPLFNLPERFQEWS
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHH
EEFGAKIIHSSLQEYLKSVKSQKPELKTVEGELKDPKYEPVLKDITSTRIYLKLMNFEAQ
HHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHEEEEEEECHHHH
LLYQRYLEPLSTLFFNEENSLPNEIEYGWRLILKSQPHDSICGCSIDKVHRDVDLRLSNA
HHHHHHHHHHHHHHCCCCCCCCCHHCCCEEEEEECCCCCCCCCCCHHHHHCCHHHHHHHH
LEIGLETLGSYLKKLSDEDTSENEKSLIVYNPYERERVTVVKGIVALDPSKNYVVVDEEG
HHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCCEEEECCCC
NICETSIEPLNPLETVDLLHRVGDNDYIQGSSFITQYITAISPNVAFGIKPVRISFMAQL
CEEECCCCCCCHHHHHHHHHHCCCCCEECCHHHHHHHHHHCCCCCEECCCHHEEHHHHHC
PAIGFKKFTIKESEITRSVDDVSTNFENKFYYFKLNEDGTFQAFDKQNNTLYEKMNFFED
CCCCCEEEEEEHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEECCCCCHHHHHHHHHHH
VADAGDEYNFSPIPDDRAIASPKNVRMKGVKNRGFSKEIDLLVEYEIPEELTNDRKARSE
HHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEEECCHHHHCHHHHCCC
RTVTVPIEVKYILFRDEPRIDVKLSLQNNAKDHKLMVGFHFPEKLDQVVNDGYFGLVKHP
CEEEEEEEEEEEEEECCCCEEEEEEECCCCCCCEEEEEECCHHHHHHHHCCCCEEEEECC
TSVEPDESATEEVTSRYAMESFVSLLGEKGKLLITSRGLHEYETQITNEGLDLKLTLLRA
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCCEEEHHHHH
VGWLSREDLLTRKGHAGPGIPTPEAQCIGRYNYRYSLRFLGDGSSEEMFDASRRFLLDPV
HCCCCHHHHHHCCCCCCCCCCCCCHHHEEECCEEEEEEEECCCCCHHHHHHHHHHHHCHH
LMETSEDTKIPTISFFELEDGIHLSALKISQNKDAVIARFLNVSNVPRKISFRKDVEIVN
HHCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEE
LAEEPTGKIISEFVLESGKVLTVKSSK
ECCCCHHHHHHHHHHCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 9063979 [H]