| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
Click here to switch to the map view.
The map label for this gene is 239616872
Identifier: 239616872
GI number: 239616872
Start: 498169
End: 498972
Strand: Direct
Name: 239616872
Synonym: Kole_0467
Alternate gene names: NA
Gene position: 498169-498972 (Clockwise)
Preceding gene: 239616871
Following gene: 239616873
Centisome position: 21.64
GC content: 39.05
Gene sequence:
>804_bases ATGAATGTTTTCAAAAAAGATTTTAGGGGCAGATTCAGATCTTTTTTCATATGGACAATAATAATCTCGCTCTTCGGATT TTTGTACATACCATTTACAGATAAGCTGCTCGAGGAATCCGAACCCATGCTGAAGATGCTTGAAAATATTCCTAAGGTTC TTTTGAATATGTTCAACATGGACGTTGCGATGTTTTCGAAACCTGAAGGAATCTTCGGTTCTGAAGGAATGAGCTTTGTT TACATACTAACCGGCGTCTTTGCTGCTATGATGGCTGGTGCCCTTTTTTCCAGGGAATTTGAAGAAAAGACCATAGAGTA CCTTCTGGTAAAACCGATATCCCGTCGTCGTATTTTCCTCGAAAAGAGTTTTACCTTAATTACCTTTGTCATCTTACTCT CCGGTCTATTCACCATAACAACCGTTCTGCTCTTTAGAACTCTTGTTCATACTGCACCATACAACGAACATATTCTCTTT GGTTTTGGGTTGTATGTGCTCTCGATCCAGTTGTTCTTTGCCGCCGTTTCAACTCTTGTGTCACTAGCTACCCAAAAATC ATCTTTAACCACATCTCTTACATTGGGTATTCTTATTTTCATGTACTTCGGAAACTCCTTGTCATCCGTCAACAAAAATC TGGCCTGGATGGGAAAAATCAGTGTCTTTCACTATCTTCCCCTCATAGACACTGTCGTAAAAGAAAAAATATTCGTATCA AACGCACTCGTCATAATACTGGTGGCATTGCTCATCTTTTATGGAGCACTTGAGTTTTTCAAACGAAAAGATGTGCTAAT TTGA
Upstream 100 bases:
>100_bases ACTTTCTGAAACGTGTTACAGAACACGAATTTGAAGACATAGAGATAAAGAATCCTACGCTTGAGAACATTTTCCTCAAA TACTACAAGGAGGAAGTAAA
Downstream 100 bases:
>100_bases AAGAACGCGCTTCGCGTCGGACGCTGGAAATCAGCTCCACTGATTGAAACTAGGGGTTGCCTGATGGCAACTGGTGCCTG GATTTGCTGACGCAAATGGT
Product: hypothetical protein
Products: NA
Alternate protein names: ABC-2 Type Transport System Permease Protein; ABC-Type Multidrug Transport System Permease Component; ABC Transporter Permease; Multidrug ABC Transporter Permease; Multidrug Transporter ABC Transporter Permease
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MNVFKKDFRGRFRSFFIWTIIISLFGFLYIPFTDKLLEESEPMLKMLENIPKVLLNMFNMDVAMFSKPEGIFGSEGMSFV YILTGVFAAMMAGALFSREFEEKTIEYLLVKPISRRRIFLEKSFTLITFVILLSGLFTITTVLLFRTLVHTAPYNEHILF GFGLYVLSIQLFFAAVSTLVSLATQKSSLTTSLTLGILIFMYFGNSLSSVNKNLAWMGKISVFHYLPLIDTVVKEKIFVS NALVIILVALLIFYGALEFFKRKDVLI
Sequences:
>Translated_267_residues MNVFKKDFRGRFRSFFIWTIIISLFGFLYIPFTDKLLEESEPMLKMLENIPKVLLNMFNMDVAMFSKPEGIFGSEGMSFV YILTGVFAAMMAGALFSREFEEKTIEYLLVKPISRRRIFLEKSFTLITFVILLSGLFTITTVLLFRTLVHTAPYNEHILF GFGLYVLSIQLFFAAVSTLVSLATQKSSLTTSLTLGILIFMYFGNSLSSVNKNLAWMGKISVFHYLPLIDTVVKEKIFVS NALVIILVALLIFYGALEFFKRKDVLI >Mature_267_residues MNVFKKDFRGRFRSFFIWTIIISLFGFLYIPFTDKLLEESEPMLKMLENIPKVLLNMFNMDVAMFSKPEGIFGSEGMSFV YILTGVFAAMMAGALFSREFEEKTIEYLLVKPISRRRIFLEKSFTLITFVILLSGLFTITTVLLFRTLVHTAPYNEHILF GFGLYVLSIQLFFAAVSTLVSLATQKSSLTTSLTLGILIFMYFGNSLSSVNKNLAWMGKISVFHYLPLIDTVVKEKIFVS NALVIILVALLIFYGALEFFKRKDVLI
Specific function: Unknown
COG id: COG1277
COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30524; Mature: 30524
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVFKKDFRGRFRSFFIWTIIISLFGFLYIPFTDKLLEESEPMLKMLENIPKVLLNMFNM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHC DVAMFSKPEGIFGSEGMSFVYILTGVFAAMMAGALFSREFEEKTIEYLLVKPISRRRIFL HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH EKSFTLITFVILLSGLFTITTVLLFRTLVHTAPYNEHILFGFGLYVLSIQLFFAAVSTLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SLATQKSSLTTSLTLGILIFMYFGNSLSSVNKNLAWMGKISVFHYLPLIDTVVKEKIFVS HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NALVIILVALLIFYGALEFFKRKDVLI HHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNVFKKDFRGRFRSFFIWTIIISLFGFLYIPFTDKLLEESEPMLKMLENIPKVLLNMFNM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHC DVAMFSKPEGIFGSEGMSFVYILTGVFAAMMAGALFSREFEEKTIEYLLVKPISRRRIFL HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH EKSFTLITFVILLSGLFTITTVLLFRTLVHTAPYNEHILFGFGLYVLSIQLFFAAVSTLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SLATQKSSLTTSLTLGILIFMYFGNSLSSVNKNLAWMGKISVFHYLPLIDTVVKEKIFVS HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NALVIILVALLIFYGALEFFKRKDVLI HHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA