| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is yfiL [H]
Identifier: 239616871
GI number: 239616871
Start: 497309
End: 498172
Strand: Direct
Name: yfiL [H]
Synonym: Kole_0466
Alternate gene names: 239616871
Gene position: 497309-498172 (Clockwise)
Preceding gene: 239616865
Following gene: 239616872
Centisome position: 21.6
GC content: 41.09
Gene sequence:
>864_bases ATGATTGAGGTTAAAGGCTTAAAGAAATACTACGGTAAAAACCGTGGCATTGAGAACGTTTCATTTATGATTAACGATGG TGAGACTTATGGGTTGATCGGCCCAAACGGCGCTGGAAAGTCAACCACAATACGCATCCTCACCGGTCTTCTCAATGAAG ACAGTGGCGAAGCGTATATCGGTGGCTTCAGAATCCCGAAGCAAATAAACAAAGTGAAAGCAGCGATCGGTTACATACCG GGCGAGGTGAATTTCTACGGTGACATGAGGGTAAAAGATTTCCTGGAACTCAACAGAAATTTCTATAAGAACGTGGATAT AGATTACGAAAGGTATATTGTGGACCTTCTTGGGATCGATACAAACAAAAGGTTCAAAGAATTATCGTTGGGAAACAAAA AGAAGGTCGCCATACTTCAGGCATTCGTTCACAAACCACACTATCTCGTACTCGATGAACCAACGAACGGCCTGGATCCG TTAATCCAGCAGAAATTCTACAGTTTGCTCGAAGACCACAGAAGAACCGGAGCGGTCGTTCTTTTTTCCTCGCACGTGCT TTCAGAGGTTGAAAAAGTATGCCAAAGATTTGGAATGATAAAAGAAGGCAAAATGATAAAAGAAGGTGACGTGAATACGC TGAAAGAGTTAACATACAAGGTTGTGGAAATTCGCGGATTCTCCGGAACCATTCATGGTTACGAAGGGAAGATAAATAGG AATGGAATCACATTCCACGTTAAAATAGAAGAATTGAAAGACTTTCTGAAACGTGTTACAGAACACGAATTTGAAGACAT AGAGATAAAGAATCCTACGCTTGAGAACATTTTCCTCAAATACTACAAGGAGGAAGTAAAATGA
Upstream 100 bases:
>100_bases ACCCTTTATTTTGGCATTGCATCAAACAAGAGATATGCTAGTATCAAGCTGGTTGTCTTCAAACCATGTAGTCTAAATAT GTATGAAGGGCAGTGAAATC
Downstream 100 bases:
>100_bases ATGTTTTCAAAAAAGATTTTAGGGGCAGATTCAGATCTTTTTTCATATGGACAATAATAATCTCGCTCTTCGGATTTTTG TACATACCATTTACAGATAA
Product: ABC transporter related
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MIEVKGLKKYYGKNRGIENVSFMINDGETYGLIGPNGAGKSTTIRILTGLLNEDSGEAYIGGFRIPKQINKVKAAIGYIP GEVNFYGDMRVKDFLELNRNFYKNVDIDYERYIVDLLGIDTNKRFKELSLGNKKKVAILQAFVHKPHYLVLDEPTNGLDP LIQQKFYSLLEDHRRTGAVVLFSSHVLSEVEKVCQRFGMIKEGKMIKEGDVNTLKELTYKVVEIRGFSGTIHGYEGKINR NGITFHVKIEELKDFLKRVTEHEFEDIEIKNPTLENIFLKYYKEEVK
Sequences:
>Translated_287_residues MIEVKGLKKYYGKNRGIENVSFMINDGETYGLIGPNGAGKSTTIRILTGLLNEDSGEAYIGGFRIPKQINKVKAAIGYIP GEVNFYGDMRVKDFLELNRNFYKNVDIDYERYIVDLLGIDTNKRFKELSLGNKKKVAILQAFVHKPHYLVLDEPTNGLDP LIQQKFYSLLEDHRRTGAVVLFSSHVLSEVEKVCQRFGMIKEGKMIKEGDVNTLKELTYKVVEIRGFSGTIHGYEGKINR NGITFHVKIEELKDFLKRVTEHEFEDIEIKNPTLENIFLKYYKEEVK >Mature_287_residues MIEVKGLKKYYGKNRGIENVSFMINDGETYGLIGPNGAGKSTTIRILTGLLNEDSGEAYIGGFRIPKQINKVKAAIGYIP GEVNFYGDMRVKDFLELNRNFYKNVDIDYERYIVDLLGIDTNKRFKELSLGNKKKVAILQAFVHKPHYLVLDEPTNGLDP LIQQKFYSLLEDHRRTGAVVLFSSHVLSEVEKVCQRFGMIKEGKMIKEGDVNTLKELTYKVVEIRGFSGTIHGYEGKINR NGITFHVKIEELKDFLKRVTEHEFEDIEIKNPTLENIFLKYYKEEVK
Specific function: Unknown
COG id: COG1131
COG function: function code V; ABC-type multidrug transport system, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI116734710, Length=224, Percent_Identity=31.25, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI45446740, Length=317, Percent_Identity=24.9211356466877, Blast_Score=113, Evalue=2e-25, Organism=Homo sapiens, GI47078218, Length=317, Percent_Identity=24.9211356466877, Blast_Score=113, Evalue=2e-25, Organism=Homo sapiens, GI153792144, Length=214, Percent_Identity=31.3084112149533, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI6005701, Length=316, Percent_Identity=26.2658227848101, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI21536376, Length=213, Percent_Identity=28.6384976525822, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI27477115, Length=224, Percent_Identity=29.4642857142857, Blast_Score=96, Evalue=5e-20, Organism=Homo sapiens, GI105990541, Length=196, Percent_Identity=29.0816326530612, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI30795238, Length=222, Percent_Identity=27.4774774774775, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI27881501, Length=222, Percent_Identity=27.4774774774775, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI27436953, Length=209, Percent_Identity=28.2296650717703, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI31657092, Length=219, Percent_Identity=28.310502283105, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI27262624, Length=215, Percent_Identity=28.8372093023256, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI27262626, Length=215, Percent_Identity=28.8372093023256, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI150417984, Length=212, Percent_Identity=27.3584905660377, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI9665248, Length=209, Percent_Identity=26.7942583732057, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI9955963, Length=227, Percent_Identity=29.0748898678414, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI87081782, Length=221, Percent_Identity=33.4841628959276, Blast_Score=132, Evalue=3e-32, Organism=Escherichia coli, GI1786319, Length=220, Percent_Identity=32.7272727272727, Blast_Score=130, Evalue=9e-32, Organism=Escherichia coli, GI48994943, Length=227, Percent_Identity=31.7180616740088, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1789593, Length=217, Percent_Identity=29.4930875576037, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI48995001, Length=216, Percent_Identity=29.6296296296296, Blast_Score=96, Evalue=4e-21, Organism=Escherichia coli, GI1786398, Length=226, Percent_Identity=27.8761061946903, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1790190, Length=229, Percent_Identity=25.764192139738, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI1788897, Length=234, Percent_Identity=29.4871794871795, Blast_Score=91, Evalue=7e-20, Organism=Escherichia coli, GI1790525, Length=225, Percent_Identity=25.3333333333333, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1788450, Length=242, Percent_Identity=25.6198347107438, Blast_Score=88, Evalue=7e-19, Organism=Escherichia coli, GI1787792, Length=213, Percent_Identity=27.2300469483568, Blast_Score=88, Evalue=8e-19, Organism=Escherichia coli, GI1789991, Length=228, Percent_Identity=26.7543859649123, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1787089, Length=228, Percent_Identity=25, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1789873, Length=207, Percent_Identity=28.0193236714976, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1788472, Length=216, Percent_Identity=25, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI1788165, Length=195, Percent_Identity=31.2820512820513, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1789672, Length=218, Percent_Identity=24.3119266055046, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI87082268, Length=213, Percent_Identity=27.6995305164319, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI87081791, Length=244, Percent_Identity=23.3606557377049, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1786975, Length=215, Percent_Identity=27.906976744186, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1787370, Length=247, Percent_Identity=24.6963562753036, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1788761, Length=250, Percent_Identity=25.2, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1788210, Length=216, Percent_Identity=25, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1786253, Length=218, Percent_Identity=26.1467889908257, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1786803, Length=210, Percent_Identity=26.6666666666667, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI87081834, Length=203, Percent_Identity=28.0788177339901, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI87082267, Length=250, Percent_Identity=26, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1786872, Length=218, Percent_Identity=24.7706422018349, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1790739, Length=221, Percent_Identity=23.0769230769231, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1788225, Length=232, Percent_Identity=24.5689655172414, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1790467, Length=217, Percent_Identity=23.5023041474654, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1786703, Length=226, Percent_Identity=26.5486725663717, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1786563, Length=209, Percent_Identity=23.444976076555, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1787041, Length=213, Percent_Identity=28.169014084507, Blast_Score=62, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17565586, Length=315, Percent_Identity=26.031746031746, Blast_Score=110, Evalue=6e-25, Organism=Caenorhabditis elegans, GI17510237, Length=217, Percent_Identity=30.4147465437788, Blast_Score=107, Evalue=7e-24, Organism=Caenorhabditis elegans, GI71983523, Length=219, Percent_Identity=30.5936073059361, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI71983516, Length=219, Percent_Identity=30.5936073059361, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI71983510, Length=219, Percent_Identity=30.5936073059361, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI115533608, Length=310, Percent_Identity=27.0967741935484, Blast_Score=97, Evalue=7e-21, Organism=Caenorhabditis elegans, GI17558664, Length=211, Percent_Identity=27.4881516587678, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI193211015, Length=220, Percent_Identity=25.4545454545455, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI193211017, Length=220, Percent_Identity=25.4545454545455, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71996809, Length=220, Percent_Identity=25.4545454545455, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17511077, Length=211, Percent_Identity=27.4881516587678, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17569143, Length=189, Percent_Identity=29.1005291005291, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71988343, Length=187, Percent_Identity=26.7379679144385, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6320874, Length=186, Percent_Identity=29.5698924731183, Blast_Score=62, Evalue=8e-11, Organism=Drosophila melanogaster, GI24643674, Length=216, Percent_Identity=28.7037037037037, Blast_Score=108, Evalue=3e-24, Organism=Drosophila melanogaster, GI221512771, Length=221, Percent_Identity=30.316742081448, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI24650855, Length=233, Percent_Identity=27.4678111587983, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI24650853, Length=233, Percent_Identity=27.4678111587983, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI85725262, Length=225, Percent_Identity=27.5555555555556, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI281362751, Length=233, Percent_Identity=27.4678111587983, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI24666092, Length=219, Percent_Identity=28.7671232876712, Blast_Score=98, Evalue=7e-21, Organism=Drosophila melanogaster, GI221500365, Length=212, Percent_Identity=28.7735849056604, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI116007184, Length=212, Percent_Identity=28.7735849056604, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI28573573, Length=218, Percent_Identity=27.9816513761468, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI28573571, Length=218, Percent_Identity=27.9816513761468, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24648314, Length=223, Percent_Identity=24.6636771300448, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI24582014, Length=217, Percent_Identity=25.8064516129032, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24582012, Length=217, Percent_Identity=25.8064516129032, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI28574744, Length=201, Percent_Identity=28.3582089552239, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI28571209, Length=220, Percent_Identity=24.5454545454545, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI116007328, Length=271, Percent_Identity=25.830258302583, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI28574150, Length=271, Percent_Identity=25.830258302583, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI85726357, Length=271, Percent_Identity=25.4612546125461, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI281363262, Length=219, Percent_Identity=26.027397260274, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24653245, Length=219, Percent_Identity=26.027397260274, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 32971; Mature: 32971
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEVKGLKKYYGKNRGIENVSFMINDGETYGLIGPNGAGKSTTIRILTGLLNEDSGEAYI CCCCCCHHHHHCCCCCCCEEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEE GGFRIPKQINKVKAAIGYIPGEVNFYGDMRVKDFLELNRNFYKNVDIDYERYIVDLLGID CCEECHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC TNKRFKELSLGNKKKVAILQAFVHKPHYLVLDEPTNGLDPLIQQKFYSLLEDHRRTGAVV CCCHHHHHCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEE LFSSHVLSEVEKVCQRFGMIKEGKMIKEGDVNTLKELTYKVVEIRGFSGTIHGYEGKINR EEHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHEEEECCCCEEECCCCEEEC NGITFHVKIEELKDFLKRVTEHEFEDIEIKNPTLENIFLKYYKEEVK CCEEEEEEHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHCC >Mature Secondary Structure MIEVKGLKKYYGKNRGIENVSFMINDGETYGLIGPNGAGKSTTIRILTGLLNEDSGEAYI CCCCCCHHHHHCCCCCCCEEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEE GGFRIPKQINKVKAAIGYIPGEVNFYGDMRVKDFLELNRNFYKNVDIDYERYIVDLLGID CCEECHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC TNKRFKELSLGNKKKVAILQAFVHKPHYLVLDEPTNGLDPLIQQKFYSLLEDHRRTGAVV CCCHHHHHCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEE LFSSHVLSEVEKVCQRFGMIKEGKMIKEGDVNTLKELTYKVVEIRGFSGTIHGYEGKINR EEHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHEEEECCCCEEECCCCEEEC NGITFHVKIEELKDFLKRVTEHEFEDIEIKNPTLENIFLKYYKEEVK CCEEEEEEHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8973323; 9384377 [H]