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The map label for this gene is 239616838

Identifier: 239616838

GI number: 239616838

Start: 462739

End: 463617

Strand: Reverse

Name: 239616838

Synonym: Kole_0433

Alternate gene names: NA

Gene position: 463617-462739 (Counterclockwise)

Preceding gene: 239616839

Following gene: 239616837

Centisome position: 20.14

GC content: 38.34

Gene sequence:

>879_bases
TTGCTTGCTATAGCAATAGATAGAGTGCTGGATATACCGGAAAATATCGCGAAGAAAAAGGGAGTTTACATACTTCCTAT
TCCTGTTTACATAGACGGGAAAATGTACCTTGATGGTGTAGATATAACCTCTGAAGAGTTTTACAGAAAGTTTCATCCTG
GAGTTGTATTGAAAACCTCGGCACCTTCATTGAAGGTTATTGAAGAGTTTTATGAGAGGATTAAATCCGATGGTTATGAT
GAGTTGCTTTTTTTCCACGTTTCTCCTGAATTAACGAGTGTGCCCAATGCCATCAAGCTTGTAGCGTCTCAGATCAAAGG
ACTGAAGGTGCATTTCTTTGACACGAGGCAAATATCCATTGGTGGCGGATTTGCTGTAATGAGAGCTATCAAACTTCTCG
AAAAGGGGAAATCTGTGAAGGAAATAATTGATATCCTTAAAGACTTCAGTAAAAACGTGTGTGTTCGTTTTACAGTTTTT
AATCTTGAATATCTGATAAAAGGGGGAAGACTCACTAAAATTGAAGGTCTTATTGGAGCTCTTTTAAAGATAAAGCCTAT
TCTTGGAATAGATAAAACAGGCAGTATAATTCCATTTCACAAAGCACGCAGTACGAAACTTGTGATGAAGAAAATGACCG
ACGATATTGTTGAACATTTGAGAAATCGGAGAAAGAATAATATACTCGCAATAGGGTGGGGACATAGTCGAATGAAAGAG
TATGCGCTGGAGCTAAAAGCAATACTTGAAAAGAAGCTTAGCGATTTTCTTGAGGAAGTTCCAGAATTTATCCATATTTA
TTTGCCCCCAGTTCTTGCATGTCATAGTGGTCCGGAACTTTTTGGTTGCGCTGCATATGGTGAACCTCTTTCGGAGTAA

Upstream 100 bases:

>100_bases
TCCGCGATTAATAAGGTGACAACGTGTTCTCTTGATTGCTTTTCTCTGAAGCTTTTTGAAAAGTCTTATTCTGACACTCT
AAGTTGTATGGGGGATTGAG

Downstream 100 bases:

>100_bases
TGGTTTGTTTGGGATTGGATGGTAGAATAATTTAGGAGGTTTAAATATGGCTCGAACGTGTTCTTCCTGTGGAAAAATCG
TTCCTCGGGGTGAAGCAATA

Product: degV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MLAIAIDRVLDIPENIAKKKGVYILPIPVYIDGKMYLDGVDITSEEFYRKFHPGVVLKTSAPSLKVIEEFYERIKSDGYD
ELLFFHVSPELTSVPNAIKLVASQIKGLKVHFFDTRQISIGGGFAVMRAIKLLEKGKSVKEIIDILKDFSKNVCVRFTVF
NLEYLIKGGRLTKIEGLIGALLKIKPILGIDKTGSIIPFHKARSTKLVMKKMTDDIVEHLRNRRKNNILAIGWGHSRMKE
YALELKAILEKKLSDFLEEVPEFIHIYLPPVLACHSGPELFGCAAYGEPLSE

Sequences:

>Translated_292_residues
MLAIAIDRVLDIPENIAKKKGVYILPIPVYIDGKMYLDGVDITSEEFYRKFHPGVVLKTSAPSLKVIEEFYERIKSDGYD
ELLFFHVSPELTSVPNAIKLVASQIKGLKVHFFDTRQISIGGGFAVMRAIKLLEKGKSVKEIIDILKDFSKNVCVRFTVF
NLEYLIKGGRLTKIEGLIGALLKIKPILGIDKTGSIIPFHKARSTKLVMKKMTDDIVEHLRNRRKNNILAIGWGHSRMKE
YALELKAILEKKLSDFLEEVPEFIHIYLPPVLACHSGPELFGCAAYGEPLSE
>Mature_292_residues
MLAIAIDRVLDIPENIAKKKGVYILPIPVYIDGKMYLDGVDITSEEFYRKFHPGVVLKTSAPSLKVIEEFYERIKSDGYD
ELLFFHVSPELTSVPNAIKLVASQIKGLKVHFFDTRQISIGGGFAVMRAIKLLEKGKSVKEIIDILKDFSKNVCVRFTVF
NLEYLIKGGRLTKIEGLIGALLKIKPILGIDKTGSIIPFHKARSTKLVMKKMTDDIVEHLRNRRKNNILAIGWGHSRMKE
YALELKAILEKKLSDFLEEVPEFIHIYLPPVLACHSGPELFGCAAYGEPLSE

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 32928; Mature: 32928

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAIAIDRVLDIPENIAKKKGVYILPIPVYIDGKMYLDGVDITSEEFYRKFHPGVVLKTS
CEEEEHHHHHCCCHHHHHHCCEEEEEEEEEECCEEEEECCCCCHHHHHHHHCCCEEEEEC
APSLKVIEEFYERIKSDGYDELLFFHVSPELTSVPNAIKLVASQIKGLKVHFFDTRQISI
CCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHCCHHHHHHHHHHCCCEEEEEECEEEEC
GGGFAVMRAIKLLEKGKSVKEIIDILKDFSKNVCVRFTVFNLEYLIKGGRLTKIEGLIGA
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEEEEEEEEEECCCCEEHHHHHHHH
LLKIKPILGIDKTGSIIPFHKARSTKLVMKKMTDDIVEHLRNRRKNNILAIGWGHSRMKE
HHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHH
YALELKAILEKKLSDFLEEVPEFIHIYLPPVLACHSGPELFGCAAYGEPLSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEECCCCCCCCC
>Mature Secondary Structure
MLAIAIDRVLDIPENIAKKKGVYILPIPVYIDGKMYLDGVDITSEEFYRKFHPGVVLKTS
CEEEEHHHHHCCCHHHHHHCCEEEEEEEEEECCEEEEECCCCCHHHHHHHHCCCEEEEEC
APSLKVIEEFYERIKSDGYDELLFFHVSPELTSVPNAIKLVASQIKGLKVHFFDTRQISI
CCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHCCHHHHHHHHHHCCCEEEEEECEEEEC
GGGFAVMRAIKLLEKGKSVKEIIDILKDFSKNVCVRFTVFNLEYLIKGGRLTKIEGLIGA
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEEEEEEEEEECCCCEEHHHHHHHH
LLKIKPILGIDKTGSIIPFHKARSTKLVMKKMTDDIVEHLRNRRKNNILAIGWGHSRMKE
HHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHH
YALELKAILEKKLSDFLEEVPEFIHIYLPPVLACHSGPELFGCAAYGEPLSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]