| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239616839
Identifier: 239616839
GI number: 239616839
Start: 463782
End: 464303
Strand: Reverse
Name: 239616839
Synonym: Kole_0434
Alternate gene names: NA
Gene position: 464303-463782 (Counterclockwise)
Preceding gene: 239616840
Following gene: 239616838
Centisome position: 20.17
GC content: 39.66
Gene sequence:
>522_bases ATGATCGAGCTCTTTCTTACTTTTCTCAAGATAGGTTTTTTGGCTTTTGGAGGGGGATACGGTGCTCTTGGGTTGATTCA GGATGAGGTAGTTGTTGTTCACAGTTGGATCGACCACGATGCTTTTTTGGATTTGCTATCCATTTCTCAGATGACGCCGG GTCCAATAGCGATCAACACAGCGACATTTATAGGATACAGATTATATGGGCTTCCAGGTTCTTTTGTAGCTACCGCTGGT GTTGTTTTGCCAAGTCTTTTTTGGGTTTTTCTTATAACAGGAGCTTTAGGTATTGTGGCAAAAAAGTCGGATATTTCAAG GGTTCTCGAGGCTTTGCGATTTGCAGTAATTGCGCTCATCATCTCGGTGACTTTTAGAATAGGAATGAGTTCAATTACTG ATTTATATAGTTTGAGCTTGTTGGTTTTTGTGATATGGCTAAAGGTAAGATACAGATTATCTGTCATATGGATTGTTTTG ATATCCGGGTTGATTGGAGTTGGTTTGGAATTTTTAAACTGA
Upstream 100 bases:
>100_bases TAGCTGTATTTGCATTTGCCATTGTCATCTTTCAGCTTCCATCGTTTTGGGGACTCCTTTTATGTGGCGCTTTGATTTAT ATCTTTCATGGAGGAAAAAG
Downstream 100 bases:
>100_bases CAGGGTATTTTTGATAGAATAAAATAATAATAGTTTTTAGTTCCTGGTTGATAGTTGTTAGTTATCCGCGATTAATAAGG TGACAACGTGTTCTCTTGAT
Product: Chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MIELFLTFLKIGFLAFGGGYGALGLIQDEVVVVHSWIDHDAFLDLLSISQMTPGPIAINTATFIGYRLYGLPGSFVATAG VVLPSLFWVFLITGALGIVAKKSDISRVLEALRFAVIALIISVTFRIGMSSITDLYSLSLLVFVIWLKVRYRLSVIWIVL ISGLIGVGLEFLN
Sequences:
>Translated_173_residues MIELFLTFLKIGFLAFGGGYGALGLIQDEVVVVHSWIDHDAFLDLLSISQMTPGPIAINTATFIGYRLYGLPGSFVATAG VVLPSLFWVFLITGALGIVAKKSDISRVLEALRFAVIALIISVTFRIGMSSITDLYSLSLLVFVIWLKVRYRLSVIWIVL ISGLIGVGLEFLN >Mature_173_residues MIELFLTFLKIGFLAFGGGYGALGLIQDEVVVVHSWIDHDAFLDLLSISQMTPGPIAINTATFIGYRLYGLPGSFVATAG VVLPSLFWVFLITGALGIVAKKSDISRVLEALRFAVIALIISVTFRIGMSSITDLYSLSLLVFVIWLKVRYRLSVIWIVL ISGLIGVGLEFLN
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 - InterPro: IPR014047 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 18870; Mature: 18870
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIELFLTFLKIGFLAFGGGYGALGLIQDEVVVVHSWIDHDAFLDLLSISQMTPGPIAINT CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEHHHHCHHHHHHHHHHHCCCCCCEEEEH ATFIGYRLYGLPGSFVATAGVVLPSLFWVFLITGALGIVAKKSDISRVLEALRFAVIALI HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH ISVTFRIGMSSITDLYSLSLLVFVIWLKVRYRLSVIWIVLISGLIGVGLEFLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIELFLTFLKIGFLAFGGGYGALGLIQDEVVVVHSWIDHDAFLDLLSISQMTPGPIAINT CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEHHHHCHHHHHHHHHHHCCCCCCEEEEH ATFIGYRLYGLPGSFVATAGVVLPSLFWVFLITGALGIVAKKSDISRVLEALRFAVIALI HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH ISVTFRIGMSSITDLYSLSLLVFVIWLKVRYRLSVIWIVLISGLIGVGLEFLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]