| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is porB [H]
Identifier: 239616789
GI number: 239616789
Start: 399284
End: 400258
Strand: Direct
Name: porB [H]
Synonym: Kole_0382
Alternate gene names: 239616789
Gene position: 399284-400258 (Clockwise)
Preceding gene: 239616788
Following gene: 239616790
Centisome position: 17.34
GC content: 44.82
Gene sequence:
>975_bases ATGGCTATTAATGTGATACAGCTTGCAAAGGAATTCGCCAAAAAGGATATCGGTATAACTCAGGGTCATCGTCTTTGTCC AGGATGCGGCGCACCTAACACGGCAAAGATGGCCTTGATGGTTGCCAAGCACCTCGGGTACGAACCCGTTGTGGGTTTTG CCACAGGTTGTATGGAAGTTTCTACCACAATCTACCCATATTCCGCATGGAGTGTTCCATACATCCACAACGCTTTTGAA AACGTTGGGGCTACCATAAGCGGTGCTGAGACAGCATATAGAGCACTCAAAAAGAAGGGTAAGCTTCCAACGGATAAACC AATAAAGTTCTTCGCTTTTGCAGGAGATGGCGGAACCTACGATATAGGGCTTCAGTCTCTTTCAGGTGCAATTGAAAGAG GTCATGATTTCGTTTACATCCTTTATGACAATGAAGGATATATGAACACTGGAAACCAGAGAAGTGGTTCCACACCTCCT GGAAGCCAAACAACAACGGCGCCCGTTGGAGAAAAAATACCCGGAAAGCTGCAGCTCAAAAAGAATATTGTAGAAATTGT TGCGGGGCATGAAAATGTTTACGCCGCCACAGCTGCTATCGGCGAACCCATTGATTACATGAACAAGCTCCAGAAAGCCA TCGAATTCGACGGGCCCGCTTTTATAGCTGTTATGGCTCCATGTGTCAGATTTTGGAGAATTAAAGAAGATTCTGCTCCG GCTATCTCAAAACTTGCTGTCGAAACCCTGTACTGGCCGTTGTACGAATACGAAAGAGGAATCTACAGAATAACCAGAAA ACCGAGAAATATAAAACCGGTAGAAGAATTCCTGAAGGCACAACAGAGGTTCAGAGCCCTTCTCAATCATCCTGATAGAG ATAAAATAATCGATATGCTCCAGAATTATGTCACCAAGAAATGGGAAAGGCTCCTCGCTCTGGAAGAAGCTACAAAGGAT AAACCACTTCGTTAA
Upstream 100 bases:
>100_bases CAATGATAAAACAGGCTTTTGAAGATGCACTCAGTGGTAATCTCAACAGCGACGAACAACGTTACCTCGGCTTGAGAGAG TGACTTGGGGGTGAAATGGT
Downstream 100 bases:
>100_bases AATTAATGTTTAAATGGAAAGCTTGCTATGATATAATCCGTAAAGTCAGGGGAGGTTAATCGCCTCCCCTTGTTGGTTGA GGTTTTGTGAGGAAATATAA
Product: thiamine pyrophosphate protein domain protein TPP-binding
Products: NA
Alternate protein names: Pyruvate oxidoreductase beta chain; POR; Pyruvic-ferredoxin oxidoreductase subunit beta [H]
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MAINVIQLAKEFAKKDIGITQGHRLCPGCGAPNTAKMALMVAKHLGYEPVVGFATGCMEVSTTIYPYSAWSVPYIHNAFE NVGATISGAETAYRALKKKGKLPTDKPIKFFAFAGDGGTYDIGLQSLSGAIERGHDFVYILYDNEGYMNTGNQRSGSTPP GSQTTTAPVGEKIPGKLQLKKNIVEIVAGHENVYAATAAIGEPIDYMNKLQKAIEFDGPAFIAVMAPCVRFWRIKEDSAP AISKLAVETLYWPLYEYERGIYRITRKPRNIKPVEEFLKAQQRFRALLNHPDRDKIIDMLQNYVTKKWERLLALEEATKD KPLR
Sequences:
>Translated_324_residues MAINVIQLAKEFAKKDIGITQGHRLCPGCGAPNTAKMALMVAKHLGYEPVVGFATGCMEVSTTIYPYSAWSVPYIHNAFE NVGATISGAETAYRALKKKGKLPTDKPIKFFAFAGDGGTYDIGLQSLSGAIERGHDFVYILYDNEGYMNTGNQRSGSTPP GSQTTTAPVGEKIPGKLQLKKNIVEIVAGHENVYAATAAIGEPIDYMNKLQKAIEFDGPAFIAVMAPCVRFWRIKEDSAP AISKLAVETLYWPLYEYERGIYRITRKPRNIKPVEEFLKAQQRFRALLNHPDRDKIIDMLQNYVTKKWERLLALEEATKD KPLR >Mature_323_residues AINVIQLAKEFAKKDIGITQGHRLCPGCGAPNTAKMALMVAKHLGYEPVVGFATGCMEVSTTIYPYSAWSVPYIHNAFEN VGATISGAETAYRALKKKGKLPTDKPIKFFAFAGDGGTYDIGLQSLSGAIERGHDFVYILYDNEGYMNTGNQRSGSTPPG SQTTTAPVGEKIPGKLQLKKNIVEIVAGHENVYAATAAIGEPIDYMNKLQKAIEFDGPAFIAVMAPCVRFWRIKEDSAPA ISKLAVETLYWPLYEYERGIYRITRKPRNIKPVEEFLKAQQRFRALLNHPDRDKIIDMLQNYVTKKWERLLALEEATKDK PLR
Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]
COG id: COG1013
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787642, Length=187, Percent_Identity=28.3422459893048, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C [H]
EC number: =1.2.7.1 [H]
Molecular weight: Translated: 36039; Mature: 35908
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAINVIQLAKEFAKKDIGITQGHRLCPGCGAPNTAKMALMVAKHLGYEPVVGFATGCMEV CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH STTIYPYSAWSVPYIHNAFENVGATISGAETAYRALKKKGKLPTDKPIKFFAFAGDGGTY HCEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEE DIGLQSLSGAIERGHDFVYILYDNEGYMNTGNQRSGSTPPGSQTTTAPVGEKIPGKLQLK EHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH KNIVEIVAGHENVYAATAAIGEPIDYMNKLQKAIEFDGPAFIAVMAPCVRFWRIKEDSAP HHHHHHHCCCCCCEEHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCH AISKLAVETLYWPLYEYERGIYRITRKPRNIKPVEEFLKAQQRFRALLNHPDRDKIIDML HHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH QNYVTKKWERLLALEEATKDKPLR HHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AINVIQLAKEFAKKDIGITQGHRLCPGCGAPNTAKMALMVAKHLGYEPVVGFATGCMEV CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH STTIYPYSAWSVPYIHNAFENVGATISGAETAYRALKKKGKLPTDKPIKFFAFAGDGGTY HCEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEE DIGLQSLSGAIERGHDFVYILYDNEGYMNTGNQRSGSTPPGSQTTTAPVGEKIPGKLQLK EHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH KNIVEIVAGHENVYAATAAIGEPIDYMNKLQKAIEFDGPAFIAVMAPCVRFWRIKEDSAP HHHHHHHCCCCCCEEHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCH AISKLAVETLYWPLYEYERGIYRITRKPRNIKPVEEFLKAQQRFRALLNHPDRDKIIDML HHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH QNYVTKKWERLLALEEATKDKPLR HHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8550425; 10360571 [H]