| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is prsA [H]
Identifier: 239616790
GI number: 239616790
Start: 400386
End: 402407
Strand: Direct
Name: prsA [H]
Synonym: Kole_0383
Alternate gene names: 239616790
Gene position: 400386-402407 (Clockwise)
Preceding gene: 239616789
Following gene: 239616791
Centisome position: 17.39
GC content: 37.98
Gene sequence:
>2022_bases ATGCATGAAACAAGATGGATGAGAAAAATTCAGGTACCGATCATCTGGACGATCGCTATACTTTTTGCTGCCGGGGTTAT CTGGTGGTCAGTGGCAACCTATATGTCCGGTAAAAGTCGTGAAACTGGAAGCACGACACCCACCAACAGTGCAAGACCCG AGGACGCCTTTGCGTATCTTACCAAAGACGGTACCCCCCTCGAAGATCCTATTTACTGGATCTCTTATTCTGAATATGAT GATACTGTTAGAGATGTTTTATCCAGTCTAAGTCAACGGAACATACAGCTTGATCCTTATTTCAAAGGTTCGGCTGGAAT GAGCGAGATCGATGTTCGATATATGGTTCTTCTTGATTTAATCGATCAAAAAATACTCATATATTACGCAAAGAAGCACA ACATCTATCCAACAGAAGATGAGATAAACACCAGGGTTGAGGAAATAGTTTCTAAATATACCAGCGATGAAAATTACAAA GCACAAATAGAGCAATATTACGGTTCTGTTGAGGCTTTCAAGGAAAAGGTCAGAAAAAGTATTTTCCCTTCAGTGTTAAA GGAAAAGGTTCAGAACGATGTCTTGAAAGATGTTGATCAAAAACTAAAGACTTATTTTGAGGAAAACAAAGATGAGATAA AGAACAAATACGAACGGGTTGAAGCAAGTCACATACTCTTGACTTCAGAAGCCAGTGCTCTGGAACTAAAAAATGAGCTT TTAAACGGTGCAATTAATTTTTCAGATGCAGCAAGTGAATTTTCTATCGATAGGAATTCAGCTGTTCTGGGCGGAAGTCT TGGAAGTTTTGGACACGGACAGATGGTAAAGGAATTCGAAGATGCTGCTTTCTCAGCAACCCCCGGAGAAATTGTTGGGC CGGTTGAGACTAAATACGGTTTCCATCTGATAAAAGTTGCAACCAAAACAGTTTTCGATACTTTCGATGAACTTAAGTCA AGCAGCGCTTACGATCAGTTCAAAAATGATTATGAAAGTGACGAATTTAAAAAATGGTTTGAGAATTACAAGAATAACGA AAAATTCGGATATGTTATAAACGACGAAGAATTGAAAATCTACAACGAATTTAAAAAAGTCCAGAATGCTGGAAATACCG ATGAATATCTCAAAAAATTGAGTACCACCATTTTCAACGAAAGTGGTGGAATTTCGGTTGAAGGTAGTTATTTGCCAATT GCAATCTTTGTGCAACTTTCAGATGAAAAACTAAACAACCTGAAATATGAACTCAACGACCTTAAAGAAATGAAAAAGTT GAGCGAAACCACACCTGCTACTATTTTGTCCTTGAGTAATGAAGAGATTGAGAAAAAACTATCAGAACTCAATGACAGCA CAGATACGAAGTTGAAAGATCTATACAGCGACGCAAAAAAATTGAAGGAATATCAATCTAAGTACGGCGAAGATATAAAT TCTGTGAATGAATTACTGGAAACAAAACAAAAGGAATTTGACGAACTGAACAGCAGATTTGCTACAGCCGTGAAGTTTCT TTACAACATGATGCCCTATTCCTTCGAGGTATTGAACTACATGTATCGTGTCGATTCTGAAAATCCAGAGGTTGTCCTAA GATACAATGAAGGTGTGTACACTCATAATTTAAAACCATTACTGGATAGTCCAAGCACTTTACAGAGTTATCTTGATTAT TACAAACAGCAACTTGGTGATAATGCGAGAATGTTTCTTATAGACTATCCGCTGCAGAAGATAGAGAGGGATTTGAATAC CAAAATTATAAATGCAACCAATGCGGCAACAGATTTGAAGGTTTCAGCCCTTTACCTGCTTGTGGATGCTTACGAAAAAT TAGCATCCTTGCCGGATCAAAACAACATCCTGGTTGAACTGTACTTGAGAGGTGAAAAACGTTATCTAAACGAGCTGAAA AAACTTCTCCCAAACGATAATGATGTTGCGTCTAAGCTTGAATTCGTAGAAAAGCAAATTGAAGAACTTCAGCAAGAAAC AACCCCACCGGCCACTGAGTAA
Upstream 100 bases:
>100_bases ATGATATAATCCGTAAAGTCAGGGGAGGTTAATCGCCTCCCCTTGTTGGTTGAGGTTTTGTGAGGAAATATAATGGTGTG TGGAGGGAGTTGAAGAACCA
Downstream 100 bases:
>100_bases TAAAAAATTCGGGGTGGCCTGAAAGCCACCCCGAATTTTTCTAAACGTGCTTTTTGTTTTTTGGCTGGGGCGGGAGGATT CGAACCTCCGGATGTCAGAT
Product: PpiC-type peptidyl-prolyl cis-trans isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 673; Mature: 673
Protein sequence:
>673_residues MHETRWMRKIQVPIIWTIAILFAAGVIWWSVATYMSGKSRETGSTTPTNSARPEDAFAYLTKDGTPLEDPIYWISYSEYD DTVRDVLSSLSQRNIQLDPYFKGSAGMSEIDVRYMVLLDLIDQKILIYYAKKHNIYPTEDEINTRVEEIVSKYTSDENYK AQIEQYYGSVEAFKEKVRKSIFPSVLKEKVQNDVLKDVDQKLKTYFEENKDEIKNKYERVEASHILLTSEASALELKNEL LNGAINFSDAASEFSIDRNSAVLGGSLGSFGHGQMVKEFEDAAFSATPGEIVGPVETKYGFHLIKVATKTVFDTFDELKS SSAYDQFKNDYESDEFKKWFENYKNNEKFGYVINDEELKIYNEFKKVQNAGNTDEYLKKLSTTIFNESGGISVEGSYLPI AIFVQLSDEKLNNLKYELNDLKEMKKLSETTPATILSLSNEEIEKKLSELNDSTDTKLKDLYSDAKKLKEYQSKYGEDIN SVNELLETKQKEFDELNSRFATAVKFLYNMMPYSFEVLNYMYRVDSENPEVVLRYNEGVYTHNLKPLLDSPSTLQSYLDY YKQQLGDNARMFLIDYPLQKIERDLNTKIINATNAATDLKVSALYLLVDAYEKLASLPDQNNILVELYLRGEKRYLNELK KLLPNDNDVASKLEFVEKQIEELQQETTPPATE
Sequences:
>Translated_673_residues MHETRWMRKIQVPIIWTIAILFAAGVIWWSVATYMSGKSRETGSTTPTNSARPEDAFAYLTKDGTPLEDPIYWISYSEYD DTVRDVLSSLSQRNIQLDPYFKGSAGMSEIDVRYMVLLDLIDQKILIYYAKKHNIYPTEDEINTRVEEIVSKYTSDENYK AQIEQYYGSVEAFKEKVRKSIFPSVLKEKVQNDVLKDVDQKLKTYFEENKDEIKNKYERVEASHILLTSEASALELKNEL LNGAINFSDAASEFSIDRNSAVLGGSLGSFGHGQMVKEFEDAAFSATPGEIVGPVETKYGFHLIKVATKTVFDTFDELKS SSAYDQFKNDYESDEFKKWFENYKNNEKFGYVINDEELKIYNEFKKVQNAGNTDEYLKKLSTTIFNESGGISVEGSYLPI AIFVQLSDEKLNNLKYELNDLKEMKKLSETTPATILSLSNEEIEKKLSELNDSTDTKLKDLYSDAKKLKEYQSKYGEDIN SVNELLETKQKEFDELNSRFATAVKFLYNMMPYSFEVLNYMYRVDSENPEVVLRYNEGVYTHNLKPLLDSPSTLQSYLDY YKQQLGDNARMFLIDYPLQKIERDLNTKIINATNAATDLKVSALYLLVDAYEKLASLPDQNNILVELYLRGEKRYLNELK KLLPNDNDVASKLEFVEKQIEELQQETTPPATE >Mature_673_residues MHETRWMRKIQVPIIWTIAILFAAGVIWWSVATYMSGKSRETGSTTPTNSARPEDAFAYLTKDGTPLEDPIYWISYSEYD DTVRDVLSSLSQRNIQLDPYFKGSAGMSEIDVRYMVLLDLIDQKILIYYAKKHNIYPTEDEINTRVEEIVSKYTSDENYK AQIEQYYGSVEAFKEKVRKSIFPSVLKEKVQNDVLKDVDQKLKTYFEENKDEIKNKYERVEASHILLTSEASALELKNEL LNGAINFSDAASEFSIDRNSAVLGGSLGSFGHGQMVKEFEDAAFSATPGEIVGPVETKYGFHLIKVATKTVFDTFDELKS SSAYDQFKNDYESDEFKKWFENYKNNEKFGYVINDEELKIYNEFKKVQNAGNTDEYLKKLSTTIFNESGGISVEGSYLPI AIFVQLSDEKLNNLKYELNDLKEMKKLSETTPATILSLSNEEIEKKLSELNDSTDTKLKDLYSDAKKLKEYQSKYGEDIN SVNELLETKQKEFDELNSRFATAVKFLYNMMPYSFEVLNYMYRVDSENPEVVLRYNEGVYTHNLKPLLDSPSTLQSYLDY YKQQLGDNARMFLIDYPLQKIERDLNTKIINATNAATDLKVSALYLLVDAYEKLASLPDQNNILVELYLRGEKRYLNELK KLLPNDNDVASKLEFVEKQIEELQQETTPPATE
Specific function: Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins [H]
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PpiC domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023059 - InterPro: IPR000297 - InterPro: IPR023058 - InterPro: IPR008880 [H]
Pfam domain/function: PF00639 Rotamase; PF05698 Trigger_C [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 77525; Mature: 77525
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS01096 PPIC_PPIASE_1 ; PS50198 PPIC_PPIASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHETRWMRKIQVPIIWTIAILFAAGVIWWSVATYMSGKSRETGSTTPTNSARPEDAFAYL CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEE TKDGTPLEDPIYWISYSEYDDTVRDVLSSLSQRNIQLDPYFKGSAGMSEIDVRYMVLLDL ECCCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHH IDQKILIYYAKKHNIYPTEDEINTRVEEIVSKYTSDENYKAQIEQYYGSVEAFKEKVRKS HCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHH IFPSVLKEKVQNDVLKDVDQKLKTYFEENKDEIKNKYERVEASHILLTSEASALELKNEL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEECCHHHHHHHHHH LNGAINFSDAASEFSIDRNSAVLGGSLGSFGHGQMVKEFEDAAFSATPGEIVGPVETKYG HHCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC FHLIKVATKTVFDTFDELKSSSAYDQFKNDYESDEFKKWFENYKNNEKFGYVINDEELKI HHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEECCCHHHH YNEFKKVQNAGNTDEYLKKLSTTIFNESGGISVEGSYLPIAIFVQLSDEKLNNLKYELND HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCEEEEEEEEEECCHHHHHHHHHHHH LKEMKKLSETTPATILSLSNEEIEKKLSELNDSTDTKLKDLYSDAKKLKEYQSKYGEDIN HHHHHHHHCCCCHHEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH SVNELLETKQKEFDELNSRFATAVKFLYNMMPYSFEVLNYMYRVDSENPEVVLRYNEGVY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCEE THNLKPLLDSPSTLQSYLDYYKQQLGDNARMFLIDYPLQKIERDLNTKIINATNAATDLK ECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCEEEECCCCCCHHH VSALYLLVDAYEKLASLPDQNNILVELYLRGEKRYLNELKKLLPNDNDVASKLEFVEKQI HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH EELQQETTPPATE HHHHHHCCCCCCC >Mature Secondary Structure MHETRWMRKIQVPIIWTIAILFAAGVIWWSVATYMSGKSRETGSTTPTNSARPEDAFAYL CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEE TKDGTPLEDPIYWISYSEYDDTVRDVLSSLSQRNIQLDPYFKGSAGMSEIDVRYMVLLDL ECCCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHH IDQKILIYYAKKHNIYPTEDEINTRVEEIVSKYTSDENYKAQIEQYYGSVEAFKEKVRKS HCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHH IFPSVLKEKVQNDVLKDVDQKLKTYFEENKDEIKNKYERVEASHILLTSEASALELKNEL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEECCHHHHHHHHHH LNGAINFSDAASEFSIDRNSAVLGGSLGSFGHGQMVKEFEDAAFSATPGEIVGPVETKYG HHCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC FHLIKVATKTVFDTFDELKSSSAYDQFKNDYESDEFKKWFENYKNNEKFGYVINDEELKI HHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEECCCHHHH YNEFKKVQNAGNTDEYLKKLSTTIFNESGGISVEGSYLPIAIFVQLSDEKLNNLKYELND HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCEEEEEEEEEECCHHHHHHHHHHHH LKEMKKLSETTPATILSLSNEEIEKKLSELNDSTDTKLKDLYSDAKKLKEYQSKYGEDIN HHHHHHHHCCCCHHEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH SVNELLETKQKEFDELNSRFATAVKFLYNMMPYSFEVLNYMYRVDSENPEVVLRYNEGVY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCEE THNLKPLLDSPSTLQSYLDYYKQQLGDNARMFLIDYPLQKIERDLNTKIINATNAATDLK ECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCEEEECCCCCCHHH VSALYLLVDAYEKLASLPDQNNILVELYLRGEKRYLNELKKLLPNDNDVASKLEFVEKQI HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH EELQQETTPPATE HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA