| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is mnmG [H]
Identifier: 238926047
GI number: 238926047
Start: 3443092
End: 3445032
Strand: Reverse
Name: mnmG [H]
Synonym: EUBREC_3706
Alternate gene names: 238926047
Gene position: 3445032-3443092 (Counterclockwise)
Preceding gene: 238926048
Following gene: 238926046
Centisome position: 99.87
GC content: 42.56
Gene sequence:
>1941_bases ATGTGCAGTAAGTTTGTTGAAGAAAATTATGATGTTGTTGTAGTTGGTGCAGGACATGCGGGATGTGAGGCAGCACTTGC GTGTGCCAGGCTTGGACTTGAGACTATTGTTTTCACGGTAAGCGTGGACAGTATAGCGCTCATGCCGTGTAATCCGAATA TCGGTGGAAGCTCGAAGGGGCATCTCGTCAGGGAGATTGATGCACTTGGCGGCGAGATGGGAAAAAACATTGACAAGACC TTTATCCAGTCAAAGATGCTAAATAAATCGAAGGGGCCTGCTGTTCATTCTCTCCGCGCGCAGGCAGATAAAGCGGAATA TAGTATGGAAATGAGAAAAACCCTTCAAAATACCGACCATCTGACCATAAGACAGGGTGAGGTTTCTGAGATTGTTACCG ATGAGAATAATAATATAGTCGGTGCAAAAACTACTTCGGGAGCTTTATATCATTGTAAGGCGATTGTGCTGTGTACCGGT ACATATTTAAGAGCCAGGTGCTTAACCGGCGAGATGATCACTCATACAGGTCCGAATGGACTTTTGGCAGCCAACCATTT GACTCAGTCGCTCATAGATCATGGAATTGAGATGCGCAGATTCAAAACAGGAACTCCAGCGCGTGTAGATAAGAGAAGTC TTGATTTTTCCAAGATGGAGGAGCAGTTCGGTGACGATAGGGTAGTGCCGTTTTCATTTACAACTGATCCTGAAAGTGTG CAGATTGATCAGGTTTCATGCTGGCTTACATATACGAATAGTAAGACCCATGAGATTATCAGAAACAATCTAGACCGTTC GCCGATTTATGCAGGTATCATAGAGGGAACAGGTCCTAGGTATTGTCCTTCAATAGAGGATAAGGTGGTTAAGTTTGCTG AAAAGGAAAGACATCAGATATTTATTGAGCCGGAGGGACTTAATACAAACGAGATGTATGTCGGAGGAATGTCATCTTCT ATGCCTGAGGATGTGCAGTATGAGATGTACCGCACCCTTCCGGGACTTGAAAATGTGAAGATAGTAAGAGACGCTTATGC CATAGAGTACGACTGTATCAATGCAAACCAGCTATATGCATCGCTCGAGTTTAAGAAAATACATGGTCTGTTCAGTGGTG GACAGTTCAACGGTTCGTCCGGATATGAGGAGGCAGCCTGTCAGGGACTTATCGCCGGCATTAATGCAGCAATGAAGATA CTTGGCAAAAAGCCATTGATACTTGACAGGTCAGAAGCGTACATAGGTGTGTTGATAGATGATCTGGTCACTAAGAAAAA TAGAGAACCTTACCGCATGATGACTTCAAGAGCGGAATATCGTCTCCTTTTAAGACAGGACAATGCAGATTTGCGCCTCA CCGAGAAGGGATACGAGGTTGGCCTGATTTCAAAGGAAAGATATGACTATGTATGTAAAAAGAAAGAGCTTATTGACAAA GAAATAGAGAGAGTGTCGCATGTAAATATCGGTGCAAGGGCTGATGTACAGGAGATTTTGAAGAAATACAACAGTATAGA GCTAAGCAACGGAACCACACTTGAGGAGCTTATCAGAAGACCTGAGCTGGATTATGACAAGCTTGCTCCGATAGATCCCG ACAGACCTAAGTTATCGGATGACACAAGAGAACAGATTAATATTCTTATTAAGTACGCAGGGTATATTTCAAGACAGATC AAGCAGGTCTCTCATTTTAAGAAGCTTGAGAAAAAACTGTTACCTACTGATTTTGATTATAATACTATTTCGGGTCTGAG AATTGAAGCACAGCAGAAGCTGAATGAATTTCAGCCGCTTAGTATAGGTCAGGCATCCAGAATTTCAGGTGTCACACCGG CTGATATATCGGTTTTACTGGTATTTCTGGAACAATTAAAATACTCAAATCCTGATTTATTTTCTAGATTAAACCCAGAT AATACAAGCGTTGAACAATAA
Upstream 100 bases:
>100_bases GAGTGCGTATGAGTCGCTTGGACTCATAATAGGAGAATCGGTTGAGGATGATCTGATGGATGAGATATTCAGTAAATTTT GTATGGGAAAGTAGGCAGTT
Downstream 100 bases:
>100_bases TAATGGAGAATAAAATATGAAATATGATTTCACACACTTCACTGATGAATTATCAAAAATTAAATGTACATTAAATAATT CACAATTAGAGCAATTTGAG
Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A [H]
Number of amino acids: Translated: 646; Mature: 646
Protein sequence:
>646_residues MCSKFVEENYDVVVVGAGHAGCEAALACARLGLETIVFTVSVDSIALMPCNPNIGGSSKGHLVREIDALGGEMGKNIDKT FIQSKMLNKSKGPAVHSLRAQADKAEYSMEMRKTLQNTDHLTIRQGEVSEIVTDENNNIVGAKTTSGALYHCKAIVLCTG TYLRARCLTGEMITHTGPNGLLAANHLTQSLIDHGIEMRRFKTGTPARVDKRSLDFSKMEEQFGDDRVVPFSFTTDPESV QIDQVSCWLTYTNSKTHEIIRNNLDRSPIYAGIIEGTGPRYCPSIEDKVVKFAEKERHQIFIEPEGLNTNEMYVGGMSSS MPEDVQYEMYRTLPGLENVKIVRDAYAIEYDCINANQLYASLEFKKIHGLFSGGQFNGSSGYEEAACQGLIAGINAAMKI LGKKPLILDRSEAYIGVLIDDLVTKKNREPYRMMTSRAEYRLLLRQDNADLRLTEKGYEVGLISKERYDYVCKKKELIDK EIERVSHVNIGARADVQEILKKYNSIELSNGTTLEELIRRPELDYDKLAPIDPDRPKLSDDTREQINILIKYAGYISRQI KQVSHFKKLEKKLLPTDFDYNTISGLRIEAQQKLNEFQPLSIGQASRISGVTPADISVLLVFLEQLKYSNPDLFSRLNPD NTSVEQ
Sequences:
>Translated_646_residues MCSKFVEENYDVVVVGAGHAGCEAALACARLGLETIVFTVSVDSIALMPCNPNIGGSSKGHLVREIDALGGEMGKNIDKT FIQSKMLNKSKGPAVHSLRAQADKAEYSMEMRKTLQNTDHLTIRQGEVSEIVTDENNNIVGAKTTSGALYHCKAIVLCTG TYLRARCLTGEMITHTGPNGLLAANHLTQSLIDHGIEMRRFKTGTPARVDKRSLDFSKMEEQFGDDRVVPFSFTTDPESV QIDQVSCWLTYTNSKTHEIIRNNLDRSPIYAGIIEGTGPRYCPSIEDKVVKFAEKERHQIFIEPEGLNTNEMYVGGMSSS MPEDVQYEMYRTLPGLENVKIVRDAYAIEYDCINANQLYASLEFKKIHGLFSGGQFNGSSGYEEAACQGLIAGINAAMKI LGKKPLILDRSEAYIGVLIDDLVTKKNREPYRMMTSRAEYRLLLRQDNADLRLTEKGYEVGLISKERYDYVCKKKELIDK EIERVSHVNIGARADVQEILKKYNSIELSNGTTLEELIRRPELDYDKLAPIDPDRPKLSDDTREQINILIKYAGYISRQI KQVSHFKKLEKKLLPTDFDYNTISGLRIEAQQKLNEFQPLSIGQASRISGVTPADISVLLVFLEQLKYSNPDLFSRLNPD NTSVEQ >Mature_646_residues MCSKFVEENYDVVVVGAGHAGCEAALACARLGLETIVFTVSVDSIALMPCNPNIGGSSKGHLVREIDALGGEMGKNIDKT FIQSKMLNKSKGPAVHSLRAQADKAEYSMEMRKTLQNTDHLTIRQGEVSEIVTDENNNIVGAKTTSGALYHCKAIVLCTG TYLRARCLTGEMITHTGPNGLLAANHLTQSLIDHGIEMRRFKTGTPARVDKRSLDFSKMEEQFGDDRVVPFSFTTDPESV QIDQVSCWLTYTNSKTHEIIRNNLDRSPIYAGIIEGTGPRYCPSIEDKVVKFAEKERHQIFIEPEGLNTNEMYVGGMSSS MPEDVQYEMYRTLPGLENVKIVRDAYAIEYDCINANQLYASLEFKKIHGLFSGGQFNGSSGYEEAACQGLIAGINAAMKI LGKKPLILDRSEAYIGVLIDDLVTKKNREPYRMMTSRAEYRLLLRQDNADLRLTEKGYEVGLISKERYDYVCKKKELIDK EIERVSHVNIGARADVQEILKKYNSIELSNGTTLEELIRRPELDYDKLAPIDPDRPKLSDDTREQINILIKYAGYISRQI KQVSHFKKLEKKLLPTDFDYNTISGLRIEAQQKLNEFQPLSIGQASRISGVTPADISVLLVFLEQLKYSNPDLFSRLNPD NTSVEQ
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 [H]
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family [H]
Homologues:
Organism=Homo sapiens, GI74024895, Length=633, Percent_Identity=39.1785150078989, Blast_Score=428, Evalue=1e-120, Organism=Homo sapiens, GI19882217, Length=658, Percent_Identity=37.6899696048632, Blast_Score=414, Evalue=1e-115, Organism=Homo sapiens, GI183227703, Length=673, Percent_Identity=36.849925705795, Blast_Score=408, Evalue=1e-114, Organism=Escherichia coli, GI2367273, Length=622, Percent_Identity=48.8745980707396, Blast_Score=595, Evalue=1e-171, Organism=Caenorhabditis elegans, GI17534255, Length=629, Percent_Identity=38.1558028616852, Blast_Score=428, Evalue=1e-120, Organism=Saccharomyces cerevisiae, GI6321202, Length=619, Percent_Identity=42.0032310177706, Blast_Score=455, Evalue=1e-128, Organism=Drosophila melanogaster, GI24658174, Length=639, Percent_Identity=39.5931142410016, Blast_Score=416, Evalue=1e-116,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 [H]
Pfam domain/function: PF01134 GIDA [H]
EC number: NA
Molecular weight: Translated: 72390; Mature: 72390
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: PS01280 GIDA_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCSKFVEENYDVVVVGAGHAGCEAALACARLGLETIVFTVSVDSIALMPCNPNIGGSSKG CCCCHHHCCCCEEEEECCCCCHHHHHHHHHHCHHHEEEEEEECCEEEEECCCCCCCCCCC HLVREIDALGGEMGKNIDKTFIQSKMLNKSKGPAVHSLRAQADKAEYSMEMRKTLQNTDH CHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC LTIRQGEVSEIVTDENNNIVGAKTTSGALYHCKAIVLCTGTYLRARCLTGEMITHTGPNG EEEECCCHHHHEECCCCCEEEEECCCCCCEEEEEEEEECCHHHHHHHCCCCHHEECCCCC LLAANHLTQSLIDHGIEMRRFKTGTPARVDKRSLDFSKMEEQFGDDRVVPFSFTTDPESV CEEHHHHHHHHHHCCCCEEEECCCCCCCCCHHCCCHHHHHHHCCCCCEEEEEECCCCCCE QIDQVSCWLTYTNSKTHEIIRNNLDRSPIYAGIIEGTGPRYCPSIEDKVVKFAEKERHQI EEEEEEEEEEECCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEE FIEPEGLNTNEMYVGGMSSSMPEDVQYEMYRTLPGLENVKIVRDAYAIEYDCINANQLYA EEECCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEHEEEEEEEECCHHHHEE SLEFKKIHGLFSGGQFNGSSGYEEAACQGLIAGINAAMKILGKKPLILDRSEAYIGVLID EEEHHHHHCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEHHHH DLVTKKNREPYRMMTSRAEYRLLLRQDNADLRLTEKGYEVGLISKERYDYVCKKKELIDK HHHHHCCCCHHHHHHCCCCEEEEEEECCCCEEEECCCCEEEEECCHHHHHHHHHHHHHHH EIERVSHVNIGARADVQEILKKYNSIELSNGTTLEELIRRPELDYDKLAPIDPDRPKLSD HHHHHHHCCCCCCCCHHHHHHHHCCEECCCCCCHHHHHCCCCCCHHHCCCCCCCCCCCCC DTREQINILIKYAGYISRQIKQVSHFKKLEKKLLPTDFDYNTISGLRIEAQQKLNEFQPL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHCCCCCC SIGQASRISGVTPADISVLLVFLEQLKYSNPDLFSRLNPDNTSVEQ CCCCCHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCC >Mature Secondary Structure MCSKFVEENYDVVVVGAGHAGCEAALACARLGLETIVFTVSVDSIALMPCNPNIGGSSKG CCCCHHHCCCCEEEEECCCCCHHHHHHHHHHCHHHEEEEEEECCEEEEECCCCCCCCCCC HLVREIDALGGEMGKNIDKTFIQSKMLNKSKGPAVHSLRAQADKAEYSMEMRKTLQNTDH CHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC LTIRQGEVSEIVTDENNNIVGAKTTSGALYHCKAIVLCTGTYLRARCLTGEMITHTGPNG EEEECCCHHHHEECCCCCEEEEECCCCCCEEEEEEEEECCHHHHHHHCCCCHHEECCCCC LLAANHLTQSLIDHGIEMRRFKTGTPARVDKRSLDFSKMEEQFGDDRVVPFSFTTDPESV CEEHHHHHHHHHHCCCCEEEECCCCCCCCCHHCCCHHHHHHHCCCCCEEEEEECCCCCCE QIDQVSCWLTYTNSKTHEIIRNNLDRSPIYAGIIEGTGPRYCPSIEDKVVKFAEKERHQI EEEEEEEEEEECCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEE FIEPEGLNTNEMYVGGMSSSMPEDVQYEMYRTLPGLENVKIVRDAYAIEYDCINANQLYA EEECCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEHEEEEEEEECCHHHHEE SLEFKKIHGLFSGGQFNGSSGYEEAACQGLIAGINAAMKILGKKPLILDRSEAYIGVLID EEEHHHHHCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEHHHH DLVTKKNREPYRMMTSRAEYRLLLRQDNADLRLTEKGYEVGLISKERYDYVCKKKELIDK HHHHHCCCCHHHHHHCCCCEEEEEEECCCCEEEECCCCEEEEECCHHHHHHHHHHHHHHH EIERVSHVNIGARADVQEILKKYNSIELSNGTTLEELIRRPELDYDKLAPIDPDRPKLSD HHHHHHHCCCCCCCCHHHHHHHHCCEECCCCCCHHHHHCCCCCCHHHCCCCCCCCCCCCC DTREQINILIKYAGYISRQIKQVSHFKKLEKKLLPTDFDYNTISGLRIEAQQKLNEFQPL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHCCCCCC SIGQASRISGVTPADISVLLVFLEQLKYSNPDLFSRLNPDNTSVEQ CCCCCHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA