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The map label for this gene is sdpR [H]

Identifier: 238926011

GI number: 238926011

Start: 3414766

End: 3415074

Strand: Reverse

Name: sdpR [H]

Synonym: EUBREC_3669

Alternate gene names: 238926011

Gene position: 3415074-3414766 (Counterclockwise)

Preceding gene: 238926012

Following gene: 238926010

Centisome position: 99.0

GC content: 41.75

Gene sequence:

>309_bases
ATGTTAAATGAAGGAGGGATAGACTTGGGAATGCAAGACACGCTTCGTGCGATTGCCGATCCTACAAGGCGTGAGATACT
TAATCTGCTCAAACATTCACGGTTGTCAGCCGGTGAGATTTGCAATCATTTTTCGGTTTCAGATGCAGCAGTTTCCCGCC
ACCTGTCCGTTTTAAAGGATGCTGATCTGATTCGTGATGAACGTGAGGGAAAATTTATCTATTATGAGCTCAATGCATCT
GTGCTTGAGGAGATTATTTTATGGATTAGTGAATTAAAAGGAGAGGATGACTATGATCAGACAACATAA

Upstream 100 bases:

>100_bases
CAGAAAAGACATCATCAGACAGACATTCAACATTCATAGGATAGAAAATCTCTTGAAAAATGAAAAGATTGTGTTATAAT
ACATTTAACAATTAAGCTAA

Downstream 100 bases:

>100_bases
AAAAATGATATTACTCACATCAATTATAACGCTGTTTCCGATTTTTATCGGCTTGCTATTGTGGAATCAATTACCGGATT
CGCTGGCAACACATTGGGGA

Product: transcriptional regulator (ArsR family)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MLNEGGIDLGMQDTLRAIADPTRREILNLLKHSRLSAGEICNHFSVSDAAVSRHLSVLKDADLIRDEREGKFIYYELNAS
VLEEIILWISELKGEDDYDQTT

Sequences:

>Translated_102_residues
MLNEGGIDLGMQDTLRAIADPTRREILNLLKHSRLSAGEICNHFSVSDAAVSRHLSVLKDADLIRDEREGKFIYYELNAS
VLEEIILWISELKGEDDYDQTT
>Mature_102_residues
MLNEGGIDLGMQDTLRAIADPTRREILNLLKHSRLSAGEICNHFSVSDAAVSRHLSVLKDADLIRDEREGKFIYYELNAS
VLEEIILWISELKGEDDYDQTT

Specific function: Represses the transcription of the sdpIR operon and of several other operons that probably contribute to delaying commitment to sporulation [H]

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 11563; Mature: 11563

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNEGGIDLGMQDTLRAIADPTRREILNLLKHSRLSAGEICNHFSVSDAAVSRHLSVLKD
CCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHH
ADLIRDEREGKFIYYELNASVLEEIILWISELKGEDDYDQTT
HHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLNEGGIDLGMQDTLRAIADPTRREILNLLKHSRLSAGEICNHFSVSDAAVSRHLSVLKD
CCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHH
ADLIRDEREGKFIYYELNASVLEEIILWISELKGEDDYDQTT
HHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]