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The map label for this gene is sdpI [H]

Identifier: 238926010

GI number: 238926010

Start: 3414147

End: 3414782

Strand: Reverse

Name: sdpI [H]

Synonym: EUBREC_3668

Alternate gene names: 238926010

Gene position: 3414782-3414147 (Counterclockwise)

Preceding gene: 238926011

Following gene: 238926009

Centisome position: 98.99

GC content: 36.01

Gene sequence:

>636_bases
ATGATCAGACAACATAAAAAAATGATATTACTCACATCAATTATAACGCTGTTTCCGATTTTTATCGGCTTGCTATTGTG
GAATCAATTACCGGATTCGCTGGCAACACATTGGGGAATAAATAATGAACCAAATGGGTATGCATCCAAAACATTCGCTG
TGTTTGGACTTCCGCTCATTATGTTATTGGGACATGCAGTGAGTGTGATTGCAATGAATATTGATCCTAAAGTAAAAAAT
ATCAGTGAAAAAGTATACTTTGTTATCTTATGGATTATTCCATTGTTATCGCTTTTCGTTTGTAATGTACTCTATGGATA
TAATTTAGGATATCAGTTGGATATGGGATTCCTGTGTGGTCTGATGATCGGAGTTTTTTATCTGATTTTGGGAAATTTTA
TACCGAAAGTAAAGCCAAACTATACGATTGGATTTCGGATTTCGTGGGCATTATGCGATCCGGAAAACTGGTATCGCACG
CATCGGTTTGGAGGAAAATGCATGGTGATCGGTGGGATTATCATGATTGTTACAGCACCATTCCAAAATATGTGGATACT
TATTGTACTTATTCTCGTCCCTTGCATTTTACCGGTAATCTATTCTTATCTGTATTACCGCAAGATAATTTCATAA

Upstream 100 bases:

>100_bases
CGTGATGAACGTGAGGGAAAATTTATCTATTATGAGCTCAATGCATCTGTGCTTGAGGAGATTATTTTATGGATTAGTGA
ATTAAAAGGAGAGGATGACT

Downstream 100 bases:

>100_bases
TTATGTTATTCCATTTTACATTCAATCAGCGGGTAATATGCCCGCTGATTTTTTCGTCATTCATCCAGAGAAACTACCGA
TGGCAGGTGGTATATATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MIRQHKKMILLTSIITLFPIFIGLLLWNQLPDSLATHWGINNEPNGYASKTFAVFGLPLIMLLGHAVSVIAMNIDPKVKN
ISEKVYFVILWIIPLLSLFVCNVLYGYNLGYQLDMGFLCGLMIGVFYLILGNFIPKVKPNYTIGFRISWALCDPENWYRT
HRFGGKCMVIGGIIMIVTAPFQNMWILIVLILVPCILPVIYSYLYYRKIIS

Sequences:

>Translated_211_residues
MIRQHKKMILLTSIITLFPIFIGLLLWNQLPDSLATHWGINNEPNGYASKTFAVFGLPLIMLLGHAVSVIAMNIDPKVKN
ISEKVYFVILWIIPLLSLFVCNVLYGYNLGYQLDMGFLCGLMIGVFYLILGNFIPKVKPNYTIGFRISWALCDPENWYRT
HRFGGKCMVIGGIIMIVTAPFQNMWILIVLILVPCILPVIYSYLYYRKIIS
>Mature_211_residues
MIRQHKKMILLTSIITLFPIFIGLLLWNQLPDSLATHWGINNEPNGYASKTFAVFGLPLIMLLGHAVSVIAMNIDPKVKN
ISEKVYFVILWIIPLLSLFVCNVLYGYNLGYQLDMGFLCGLMIGVFYLILGNFIPKVKPNYTIGFRISWALCDPENWYRT
HRFGGKCMVIGGIIMIVTAPFQNMWILIVLILVPCILPVIYSYLYYRKIIS

Specific function: Immunity protein that provides protection for the cell against the toxic effects of its own sdpC killing factor, and that functions as a receptor/signal transduction protein as well. Once sdpC accumulates in the extracellular milieu, sdpI binds to sdpC, c

COG id: COG5658

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012867 [H]

Pfam domain/function: PF07853 DUF1648 [H]

EC number: NA

Molecular weight: Translated: 24128; Mature: 24128

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRQHKKMILLTSIITLFPIFIGLLLWNQLPDSLATHWGINNEPNGYASKTFAVFGLPLI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
MLLGHAVSVIAMNIDPKVKNISEKVYFVILWIIPLLSLFVCNVLYGYNLGYQLDMGFLCG
HHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHH
LMIGVFYLILGNFIPKVKPNYTIGFRISWALCDPENWYRTHRFGGKCMVIGGIIMIVTAP
HHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCHHHHHHHHCCCEEEEHHHHHHHHCCC
FQNMWILIVLILVPCILPVIYSYLYYRKIIS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIRQHKKMILLTSIITLFPIFIGLLLWNQLPDSLATHWGINNEPNGYASKTFAVFGLPLI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
MLLGHAVSVIAMNIDPKVKNISEKVYFVILWIIPLLSLFVCNVLYGYNLGYQLDMGFLCG
HHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHH
LMIGVFYLILGNFIPKVKPNYTIGFRISWALCDPENWYRTHRFGGKCMVIGGIIMIVTAP
HHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCHHHHHHHHCCCEEEEHHHHHHHHCCC
FQNMWILIVLILVPCILPVIYSYLYYRKIIS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]