| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925996
Identifier: 238925996
GI number: 238925996
Start: 3402831
End: 3404036
Strand: Reverse
Name: 238925996
Synonym: EUBREC_3654
Alternate gene names: NA
Gene position: 3404036-3402831 (Counterclockwise)
Preceding gene: 238925997
Following gene: 238925995
Centisome position: 98.68
GC content: 34.41
Gene sequence:
>1206_bases ATGAACAGAAAGGAATTATTCATGAAAAAGAGAAAAATAGCAACAATATTATTGGCAGCATGTTTGCTGTTAGGAAATGT CTCAGTAGCGAATGCGGCAAGTATTGATAATGGCAATAAAGTACATTTCAATACAGAAGATAACGACACGGATTTAACAT TATTACAATCGAAAATTGCAACCGAAGAAGTGACTTGTGACTTTACGGATGCAACAAATGATGGAGCAAGTGCATATGCA GATACAAGAAGGGTGTCAAATAAATATATGTGGAGTGCAAGCACGATGGAATATAATTTCTCTGATCAGAAATGGACATC GAATACAGAAATTTTTAGTACATATGCAAAAACATCAGAAGGGTTTGTAATGTCTGGTTTCTTACTGAATCCAAAAGGTC AGAGCAACTATAATTCGGCATTAAGAGAGGGGTATCTGAATGATTCTGCATATGATGAAAATCAGGGACATTATTATCAA TGTGTTGTTTCGGATGAGGACTGTAATAATATTACATTTATGTTAGAATCTAATGTTAATGTATTTATTTTTGACAATGA TATAAATTTAATATATCGTTCATCGGATGAGGCGGGAGTTACCAGTTATTTTGACAGATATTATTCAACAACTAAAACGA TTGCAGGAACGTCGAATAAGGTAATTAGTTTAGGTCTTATTGATGGAAATTATTATATTGTTTTTAAGGTAAAAGATGCA ACAGCAACTACCGGTTATCATTATGGATATTATGCTGGACAACCATTGCCAATAGCACAAACAACAACCTTTTCGGATCT TACACATTATACAACAATAAAGTGGAATCGAAGCTCATCTAGCCAATCAGCAAGTACGCAAACATTGACCATTAATTGTC CTAGTGGAAGTGAAGATGAGTATGCATTGACAGGTGTGAAATTTTCGGATAAATCAAAAGCATTTGCTAATAATACATAC GCATCAAGCATTGACTATTATTATACGCCAGCAACTGCTAGTTATTCAAAAAAACTAGCACAAACAGGTGGTTGGTGGAG TGACTTGGTTGACAATAATCCACCATCAGGATCAATTGATGGAAACTATGCAACATCTGTTACAGTACATTGGGTAAGTG GTATTTCTTATGTAAATGCTAGTTGCACTACAATGACACAGATGACATTGGATTATTTAGTTCCTTTCGGAATAATAGTG GGCTAA
Upstream 100 bases:
>100_bases TATGATTCGAAATTTTTAAATTAAAAAATAAACAATAGAGGGAGGGAAAGCGTTTTAATAATGAATCTATATAAATCAAA AAACTATAAAATAAAGAACT
Downstream 100 bases:
>100_bases ATATTTAGAAAGATAAATAAATTACGGATGGTATTTTTATACAATCCGTGGATTCCAAGAGGTGACGATAAGATGGGACA CTATGTACATTATATAGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MNRKELFMKKRKIATILLAACLLLGNVSVANAASIDNGNKVHFNTEDNDTDLTLLQSKIATEEVTCDFTDATNDGASAYA DTRRVSNKYMWSASTMEYNFSDQKWTSNTEIFSTYAKTSEGFVMSGFLLNPKGQSNYNSALREGYLNDSAYDENQGHYYQ CVVSDEDCNNITFMLESNVNVFIFDNDINLIYRSSDEAGVTSYFDRYYSTTKTIAGTSNKVISLGLIDGNYYIVFKVKDA TATTGYHYGYYAGQPLPIAQTTTFSDLTHYTTIKWNRSSSSQSASTQTLTINCPSGSEDEYALTGVKFSDKSKAFANNTY ASSIDYYYTPATASYSKKLAQTGGWWSDLVDNNPPSGSIDGNYATSVTVHWVSGISYVNASCTTMTQMTLDYLVPFGIIV G
Sequences:
>Translated_401_residues MNRKELFMKKRKIATILLAACLLLGNVSVANAASIDNGNKVHFNTEDNDTDLTLLQSKIATEEVTCDFTDATNDGASAYA DTRRVSNKYMWSASTMEYNFSDQKWTSNTEIFSTYAKTSEGFVMSGFLLNPKGQSNYNSALREGYLNDSAYDENQGHYYQ CVVSDEDCNNITFMLESNVNVFIFDNDINLIYRSSDEAGVTSYFDRYYSTTKTIAGTSNKVISLGLIDGNYYIVFKVKDA TATTGYHYGYYAGQPLPIAQTTTFSDLTHYTTIKWNRSSSSQSASTQTLTINCPSGSEDEYALTGVKFSDKSKAFANNTY ASSIDYYYTPATASYSKKLAQTGGWWSDLVDNNPPSGSIDGNYATSVTVHWVSGISYVNASCTTMTQMTLDYLVPFGIIV G >Mature_401_residues MNRKELFMKKRKIATILLAACLLLGNVSVANAASIDNGNKVHFNTEDNDTDLTLLQSKIATEEVTCDFTDATNDGASAYA DTRRVSNKYMWSASTMEYNFSDQKWTSNTEIFSTYAKTSEGFVMSGFLLNPKGQSNYNSALREGYLNDSAYDENQGHYYQ CVVSDEDCNNITFMLESNVNVFIFDNDINLIYRSSDEAGVTSYFDRYYSTTKTIAGTSNKVISLGLIDGNYYIVFKVKDA TATTGYHYGYYAGQPLPIAQTTTFSDLTHYTTIKWNRSSSSQSASTQTLTINCPSGSEDEYALTGVKFSDKSKAFANNTY ASSIDYYYTPATASYSKKLAQTGGWWSDLVDNNPPSGSIDGNYATSVTVHWVSGISYVNASCTTMTQMTLDYLVPFGIIV G
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44367; Mature: 44367
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRKELFMKKRKIATILLAACLLLGNVSVANAASIDNGNKVHFNTEDNDTDLTLLQSKIA CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHC TEEVTCDFTDATNDGASAYADTRRVSNKYMWSASTMEYNFSDQKWTSNTEIFSTYAKTSE CCEEEEEECCCCCCCCHHHHHHHHHCCEEEEEECEEEEECCCCCCCCCCCEEEEECCCCC GFVMSGFLLNPKGQSNYNSALREGYLNDSAYDENQGHYYQCVVSDEDCNNITFMLESNVN CEEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCE VFIFDNDINLIYRSSDEAGVTSYFDRYYSTTKTIAGTSNKVISLGLIDGNYYIVFKVKDA EEEEECCEEEEEECCCCCCHHHHHHHHHHHHHEECCCCCCEEEEEEECCCEEEEEEECCC TATTGYHYGYYAGQPLPIAQTTTFSDLTHYTTIKWNRSSSSQSASTQTLTINCPSGSEDE CEECCEECCEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCC YALTGVKFSDKSKAFANNTYASSIDYYYTPATASYSKKLAQTGGWWSDLVDNNPPSGSID EEEEEEEECCCCCHHCCCCCCCCCCEEECCCCCHHHHHHHHCCCCHHHHHCCCCCCCCCC GNYATSVTVHWVSGISYVNASCTTMTQMTLDYLVPFGIIVG CCEEEEEEEEEECCCEEECCCHHHHHHHHHHHHHHHHEECC >Mature Secondary Structure MNRKELFMKKRKIATILLAACLLLGNVSVANAASIDNGNKVHFNTEDNDTDLTLLQSKIA CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHC TEEVTCDFTDATNDGASAYADTRRVSNKYMWSASTMEYNFSDQKWTSNTEIFSTYAKTSE CCEEEEEECCCCCCCCHHHHHHHHHCCEEEEEECEEEEECCCCCCCCCCCEEEEECCCCC GFVMSGFLLNPKGQSNYNSALREGYLNDSAYDENQGHYYQCVVSDEDCNNITFMLESNVN CEEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCE VFIFDNDINLIYRSSDEAGVTSYFDRYYSTTKTIAGTSNKVISLGLIDGNYYIVFKVKDA EEEEECCEEEEEECCCCCCHHHHHHHHHHHHHEECCCCCCEEEEEEECCCEEEEEEECCC TATTGYHYGYYAGQPLPIAQTTTFSDLTHYTTIKWNRSSSSQSASTQTLTINCPSGSEDE CEECCEECCEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCC YALTGVKFSDKSKAFANNTYASSIDYYYTPATASYSKKLAQTGGWWSDLVDNNPPSGSID EEEEEEEECCCCCHHCCCCCCCCCCEEECCCCCHHHHHHHHCCCCHHHHHCCCCCCCCCC GNYATSVTVHWVSGISYVNASCTTMTQMTLDYLVPFGIIVG CCEEEEEEEEEECCCEEECCCHHHHHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA