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The map label for this gene is ybdO [H]

Identifier: 238925997

GI number: 238925997

Start: 3404207

End: 3405397

Strand: Reverse

Name: ybdO [H]

Synonym: EUBREC_3655

Alternate gene names: 238925997

Gene position: 3405397-3404207 (Counterclockwise)

Preceding gene: 238925998

Following gene: 238925996

Centisome position: 98.72

GC content: 35.52

Gene sequence:

>1191_bases
ATGAATATATTTTTTAACAGCCGAATAAATGCTAATCAGTCATTGCTTAATGTTCTGTTTGGTCAACAACAAAAAGCGGC
AAGCAGTCAAAACACTGGTTGTAGAGGCACAAGAGATACTTTAACGATAAGTGCATCAGGAAAGGAAAAACTGACAAAAA
GTACAAGTGGAAGAACACATAATACAAGTATTGATAGCAGCATTGATTTAAAGTCCTATATAGCTTCAGCAAAAAAAACG
AATCAAGAGATCATTGAGAATGCAGGAACACAGATTAATGCGAAAACAAGTGAATATATGAGTACAGGTAAAGCATTTAG
GGCAGCATTAACGGAAAAGTATTCTAAGCTTGCTGCAGAAGCAAAAACACATTCTAACCCTGAAAATTATATTCATTCCA
AGTATTTTGATAAGAGTTCAGAGTATTACGAGACGAATCTGACTGATACAGAACGTAGGATTGCATATAATTATGAGATG
CAGATGTGCCGGACAGGAAAAATAAATGGTGTAAATTATCAGGATTCTTTGTTCAGGGGAATTGAAGTGGACGGCGACAG
TGTAGATTCGGATAAAATCCAATTTGAAAGAGCATTGGTAAATTCGCAGATTTCAAATATTTTAAAGCAGGCTGGTGTAG
ACACATCTTCTATTACGGAAGATTGTATTTTTACTGTCGATCCATACAGTTACGAGATAACGGTAGATGGCGTGGATGAA
GAAACAAAGGTGTTGATGCAGAATGCTTTAAATGTAGGTAATAATGGGAAAAATCTCTATAAGCATATCTATTATTGCTC
AACACAAGATGGCTGTGAGAGTTCTCAAGTAACAGAGGAATCAAAGATGAAATACGAAGCATATCATCAGGTTTATAGTT
ATACAGGATATGGATTAGACAAACTTGAGGAAAAAAATGGGACATATTATACGGAGTCAGGAGAGAATATATTAGACTTA
GTGGATAAGGCTGTTGAAGATTCTGGAAAAGTTCCGAAAGAGTTCAAGCAGCAAATGAAGAATTGGATACATGACCTGGT
TTCAACTATGTCAACTAAAGGATGGAACAATGTGCCGGATATGACTTTAAGCATTTTATATGGAAAGAGTGGTTTAAAGG
ACATGAATCAGTTGATCACATATCAATATGAAGCTGATAGTACAAACAGGCAATGGTATTCTGTACTTTAG

Upstream 100 bases:

>100_bases
ATGGTATTCGTATGAAACAGGAATCAATGACAGATTCGGTGATTATTGAGATAGTGAAAGATTAGGATAATCCGATATAT
ATAAGGAGGTTTGTGATATT

Downstream 100 bases:

>100_bases
AAATATAATATTTTTGAAAAAATATAGGGAAGTGTGTCAAGTATAGTAATATAGTTTTTTAGATAAAATATATGATTCGA
AATTTTTAAATTAAAAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MNIFFNSRINANQSLLNVLFGQQQKAASSQNTGCRGTRDTLTISASGKEKLTKSTSGRTHNTSIDSSIDLKSYIASAKKT
NQEIIENAGTQINAKTSEYMSTGKAFRAALTEKYSKLAAEAKTHSNPENYIHSKYFDKSSEYYETNLTDTERRIAYNYEM
QMCRTGKINGVNYQDSLFRGIEVDGDSVDSDKIQFERALVNSQISNILKQAGVDTSSITEDCIFTVDPYSYEITVDGVDE
ETKVLMQNALNVGNNGKNLYKHIYYCSTQDGCESSQVTEESKMKYEAYHQVYSYTGYGLDKLEEKNGTYYTESGENILDL
VDKAVEDSGKVPKEFKQQMKNWIHDLVSTMSTKGWNNVPDMTLSILYGKSGLKDMNQLITYQYEADSTNRQWYSVL

Sequences:

>Translated_396_residues
MNIFFNSRINANQSLLNVLFGQQQKAASSQNTGCRGTRDTLTISASGKEKLTKSTSGRTHNTSIDSSIDLKSYIASAKKT
NQEIIENAGTQINAKTSEYMSTGKAFRAALTEKYSKLAAEAKTHSNPENYIHSKYFDKSSEYYETNLTDTERRIAYNYEM
QMCRTGKINGVNYQDSLFRGIEVDGDSVDSDKIQFERALVNSQISNILKQAGVDTSSITEDCIFTVDPYSYEITVDGVDE
ETKVLMQNALNVGNNGKNLYKHIYYCSTQDGCESSQVTEESKMKYEAYHQVYSYTGYGLDKLEEKNGTYYTESGENILDL
VDKAVEDSGKVPKEFKQQMKNWIHDLVSTMSTKGWNNVPDMTLSILYGKSGLKDMNQLITYQYEADSTNRQWYSVL
>Mature_396_residues
MNIFFNSRINANQSLLNVLFGQQQKAASSQNTGCRGTRDTLTISASGKEKLTKSTSGRTHNTSIDSSIDLKSYIASAKKT
NQEIIENAGTQINAKTSEYMSTGKAFRAALTEKYSKLAAEAKTHSNPENYIHSKYFDKSSEYYETNLTDTERRIAYNYEM
QMCRTGKINGVNYQDSLFRGIEVDGDSVDSDKIQFERALVNSQISNILKQAGVDTSSITEDCIFTVDPYSYEITVDGVDE
ETKVLMQNALNVGNNGKNLYKHIYYCSTQDGCESSQVTEESKMKYEAYHQVYSYTGYGLDKLEEKNGTYYTESGENILDL
VDKAVEDSGKVPKEFKQQMKNWIHDLVSTMSTKGWNNVPDMTLSILYGKSGLKDMNQLITYQYEADSTNRQWYSVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44691; Mature: 44691

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIFFNSRINANQSLLNVLFGQQQKAASSQNTGCRGTRDTLTISASGKEKLTKSTSGRTH
CCEEECCCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHCCCCCCC
NTSIDSSIDLKSYIASAKKTNQEIIENAGTQINAKTSEYMSTGKAFRAALTEKYSKLAAE
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
AKTHSNPENYIHSKYFDKSSEYYETNLTDTERRIAYNYEMQMCRTGKINGVNYQDSLFRG
HHCCCCHHHHHHHHHCCCCCCEEECCCCCCHHHEEEEEEEEEECCCCCCCCCCHHHHHCC
IEVDGDSVDSDKIQFERALVNSQISNILKQAGVDTSSITEDCIFTVDPYSYEITVDGVDE
EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEECCCEEEEEECCCCH
ETKVLMQNALNVGNNGKNLYKHIYYCSTQDGCESSQVTEESKMKYEAYHQVYSYTGYGLD
HHHHHHHHHHCCCCCCHHHHHEEEEECCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCHH
KLEEKNGTYYTESGENILDLVDKAVEDSGKVPKEFKQQMKNWIHDLVSTMSTKGWNNVPD
HHHHCCCCEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
MTLSILYGKSGLKDMNQLITYQYEADSTNRQWYSVL
CEEEEEECCCCHHHHHHHHEEEECCCCCCCCEEECC
>Mature Secondary Structure
MNIFFNSRINANQSLLNVLFGQQQKAASSQNTGCRGTRDTLTISASGKEKLTKSTSGRTH
CCEEECCCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHCCCCCCC
NTSIDSSIDLKSYIASAKKTNQEIIENAGTQINAKTSEYMSTGKAFRAALTEKYSKLAAE
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
AKTHSNPENYIHSKYFDKSSEYYETNLTDTERRIAYNYEMQMCRTGKINGVNYQDSLFRG
HHCCCCHHHHHHHHHCCCCCCEEECCCCCCHHHEEEEEEEEEECCCCCCCCCCHHHHHCC
IEVDGDSVDSDKIQFERALVNSQISNILKQAGVDTSSITEDCIFTVDPYSYEITVDGVDE
EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEECCCEEEEEECCCCH
ETKVLMQNALNVGNNGKNLYKHIYYCSTQDGCESSQVTEESKMKYEAYHQVYSYTGYGLD
HHHHHHHHHHCCCCCCHHHHHEEEEECCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCHH
KLEEKNGTYYTESGENILDLVDKAVEDSGKVPKEFKQQMKNWIHDLVSTMSTKGWNNVPD
HHHHCCCCEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
MTLSILYGKSGLKDMNQLITYQYEADSTNRQWYSVL
CEEEEEECCCCHHHHHHHHEEEECCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]