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The map label for this gene is soj [H]

Identifier: 238925954

GI number: 238925954

Start: 3377105

End: 3377890

Strand: Reverse

Name: soj [H]

Synonym: EUBREC_3612

Alternate gene names: 238925954

Gene position: 3377890-3377105 (Counterclockwise)

Preceding gene: 238925955

Following gene: 238925953

Centisome position: 97.92

GC content: 38.8

Gene sequence:

>786_bases
ATGGCTAGAATTATTTCTATTGTAAACCAAAAAGGGGGAACGGGAAAATCCGCATGTACAGCTAATTTAGCAGTAGGATT
AGCACAAAAGAATATGAAAGTGTTGATTGTAGATGCCGATCCACAGTCTGATGTATCCGCAGGATTTGGATATCGTGATT
GTGATGACAGTAATGAAACACTTACTGCTCTTATGGATGCTGTAATGAAAGATGAAGATATTCCTTCCGAATGTTTTATC
AGACATCAGGCAGAGGGGATAGACATTATCTGTTCTAACATTGGACTGGCAGGTACGGAAGTACAGTTGGTAAATGCAAT
GAGTAGAGAATATGTATTGAAACAGATTTTATATGGTATCAAAGATCAATATGATGTAGTCATCATTGATTGTATGCCAT
CATTGGGAATGATTACGATTAATGCGCTGGCTGCATCAGATGAAGTCCTCATTCCAGTTGAAGCATCCTACCTGCCAATC
AAAGGATTGCAGCAGTTGTTAAAAACAATCGGTAAGGTCCGTAAGCAGATTAATCCGAAGCTGCAAGTCGGAGGTATTTT
GTTTACGATGGTCGATGCTCATACGAATGATGCCAGAAATAACATGGAACTTCTCAGAAATGTATATGGAAGTCAAATTC
ATATCTTTGATAATTATATTCCATTTTCTGTAAGAATGAAGGAAGCAGTCAGAGAAGGACAGAGTATTTTCTCTTATGAT
CCGAAAGGCAAAGCTACAGAAGCTTATCGGAGAGTGACGGAGGAGGTGCTGAAAGATGCCATCTAA

Upstream 100 bases:

>100_bases
TTATTGTAATTATAGGACTGAATTAGCTCGCACGGAATATAGATTCCGGATGTCTAATTCAGTCCTCTTTTTGATTGATG
ACGATGAAAGGTGATGAAAA

Downstream 100 bases:

>100_bases
AAAAAGAGCAACTCCCATTTCCTTACAGCCACTTGATGCGTTATTTGGAACAAACGAAGAAACAAACAATGGAATTTGTG
AGATAGAAATAGGAAGCCTT

Product: chromosome partitioning protein ParA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MARIISIVNQKGGTGKSACTANLAVGLAQKNMKVLIVDADPQSDVSAGFGYRDCDDSNETLTALMDAVMKDEDIPSECFI
RHQAEGIDIICSNIGLAGTEVQLVNAMSREYVLKQILYGIKDQYDVVIIDCMPSLGMITINALAASDEVLIPVEASYLPI
KGLQQLLKTIGKVRKQINPKLQVGGILFTMVDAHTNDARNNMELLRNVYGSQIHIFDNYIPFSVRMKEAVREGQSIFSYD
PKGKATEAYRRVTEEVLKDAI

Sequences:

>Translated_261_residues
MARIISIVNQKGGTGKSACTANLAVGLAQKNMKVLIVDADPQSDVSAGFGYRDCDDSNETLTALMDAVMKDEDIPSECFI
RHQAEGIDIICSNIGLAGTEVQLVNAMSREYVLKQILYGIKDQYDVVIIDCMPSLGMITINALAASDEVLIPVEASYLPI
KGLQQLLKTIGKVRKQINPKLQVGGILFTMVDAHTNDARNNMELLRNVYGSQIHIFDNYIPFSVRMKEAVREGQSIFSYD
PKGKATEAYRRVTEEVLKDAI
>Mature_260_residues
ARIISIVNQKGGTGKSACTANLAVGLAQKNMKVLIVDADPQSDVSAGFGYRDCDDSNETLTALMDAVMKDEDIPSECFIR
HQAEGIDIICSNIGLAGTEVQLVNAMSREYVLKQILYGIKDQYDVVIIDCMPSLGMITINALAASDEVLIPVEASYLPIK
GLQQLLKTIGKVRKQINPKLQVGGILFTMVDAHTNDARNNMELLRNVYGSQIHIFDNYIPFSVRMKEAVREGQSIFSYDP
KGKATEAYRRVTEEVLKDAI

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 28708; Mature: 28576

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARIISIVNQKGGTGKSACTANLAVGLAQKNMKVLIVDADPQSDVSAGFGYRDCDDSNET
CHHHHHHHHCCCCCCCHHHHHHHHHEEECCCCEEEEEECCCCCCHHCCCCCCCCCCCCHH
LTALMDAVMKDEDIPSECFIRHQAEGIDIICSNIGLAGTEVQLVNAMSREYVLKQILYGI
HHHHHHHHHCCCCCCHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHC
KDQYDVVIIDCMPSLGMITINALAASDEVLIPVEASYLPIKGLQQLLKTIGKVRKQINPK
CCCCCEEEEECCCCCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCC
LQVGGILFTMVDAHTNDARNNMELLRNVYGSQIHIFDNYIPFSVRMKEAVREGQSIFSYD
EEECEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCEECCC
PKGKATEAYRRVTEEVLKDAI
CCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ARIISIVNQKGGTGKSACTANLAVGLAQKNMKVLIVDADPQSDVSAGFGYRDCDDSNET
HHHHHHHHCCCCCCCHHHHHHHHHEEECCCCEEEEEECCCCCCHHCCCCCCCCCCCCHH
LTALMDAVMKDEDIPSECFIRHQAEGIDIICSNIGLAGTEVQLVNAMSREYVLKQILYGI
HHHHHHHHHCCCCCCHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHC
KDQYDVVIIDCMPSLGMITINALAASDEVLIPVEASYLPIKGLQQLLKTIGKVRKQINPK
CCCCCEEEEECCCCCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCC
LQVGGILFTMVDAHTNDARNNMELLRNVYGSQIHIFDNYIPFSVRMKEAVREGQSIFSYD
EEECEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCEECCC
PKGKATEAYRRVTEEVLKDAI
CCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]