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The map label for this gene is spo0J [H]

Identifier: 238925953

GI number: 238925953

Start: 3376219

End: 3377115

Strand: Reverse

Name: spo0J [H]

Synonym: EUBREC_3611

Alternate gene names: 238925953

Gene position: 3377115-3376219 (Counterclockwise)

Preceding gene: 238925954

Following gene: 238925952

Centisome position: 97.9

GC content: 39.58

Gene sequence:

>897_bases
ATGCCATCTAAAAAAAGAGCAACTCCCATTTCCTTACAGCCACTTGATGCGTTATTTGGAACAAACGAAGAAACAAACAA
TGGAATTTGTGAGATAGAAATAGGAAGCCTTCATCCATTTCCAAATCACCCGTTTCAAGTAAAAGATGATAAGAAAATGG
AAGAATTATCAGAAAGCATTACACAATATGGCGTGTTGGTTCCTGGTATTGTGCGATTGAGAGAGTCCGGTGGTTATGAG
CTGGTAGCTGGTCATAGGCGAAAACGAGCATGTGAACTTGCGGGATTAGAGAAAATGCCTGTTATCATCAAAGATCTTAC
AGATGATGAAGCGACGGTGATCATGGTAGATTCCAACATTCAACGAGAAGAGCTGCTGATCAGTGAAAAGGCATTCGCTT
ATAAAATGAAATATGAGGCGTTAAAGCGTCAGGGAAAACGGTCTGATTTAACTTCTTGCCAAGTTGGCAAGAAGTTGGCG
GCAGAAGAAGTCAGTCAGAATACAGGAGATAGTTCCAGACAGATTCTTCGATATATTCATCTGACAGAGTTAATCGCAGA
ACTTTTAGAACTGGCAGACGAGAAGAAGCTTCCCTTTAATACAGCTGTTGAAGTTTCATATTTGAGAAGTGAAGAACAAC
AGATATTGCTTCAGTATATGAGTAATCACAATATGGTACCGTCTATGAAGCAGGCAAAGGAATTGAAGCAGATTGCAAAA
GAGCAGATGTTGACATATTCAGAGATTGACCAGATCTGTATGAATGAAAGTACTGAGAAAGTACAGGTACAGATTCCGGC
GAAAAAGCTGAAACAGTATTTTCCTGAGTCATATTCTAAAGCTCAGATGGAAGAAGTGATATTTATGCTCCTGGCATCAT
GGGCAGAAAAACAATAA

Upstream 100 bases:

>100_bases
ATGAAGGAAGCAGTCAGAGAAGGACAGAGTATTTTCTCTTATGATCCGAAAGGCAAAGCTACAGAAGCTTATCGGAGAGT
GACGGAGGAGGTGCTGAAAG

Downstream 100 bases:

>100_bases
TATGATATGCGAAGTTGGACAGAAGGAATGAAAAGATGATGATAGAAGATGTAATTAAAAAATCAATACTGCCACTGGCA
TTTATGCTATTCTGGTTCTG

Product: chromosome partitioning parB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MPSKKRATPISLQPLDALFGTNEETNNGICEIEIGSLHPFPNHPFQVKDDKKMEELSESITQYGVLVPGIVRLRESGGYE
LVAGHRRKRACELAGLEKMPVIIKDLTDDEATVIMVDSNIQREELLISEKAFAYKMKYEALKRQGKRSDLTSCQVGKKLA
AEEVSQNTGDSSRQILRYIHLTELIAELLELADEKKLPFNTAVEVSYLRSEEQQILLQYMSNHNMVPSMKQAKELKQIAK
EQMLTYSEIDQICMNESTEKVQVQIPAKKLKQYFPESYSKAQMEEVIFMLLASWAEKQ

Sequences:

>Translated_298_residues
MPSKKRATPISLQPLDALFGTNEETNNGICEIEIGSLHPFPNHPFQVKDDKKMEELSESITQYGVLVPGIVRLRESGGYE
LVAGHRRKRACELAGLEKMPVIIKDLTDDEATVIMVDSNIQREELLISEKAFAYKMKYEALKRQGKRSDLTSCQVGKKLA
AEEVSQNTGDSSRQILRYIHLTELIAELLELADEKKLPFNTAVEVSYLRSEEQQILLQYMSNHNMVPSMKQAKELKQIAK
EQMLTYSEIDQICMNESTEKVQVQIPAKKLKQYFPESYSKAQMEEVIFMLLASWAEKQ
>Mature_297_residues
PSKKRATPISLQPLDALFGTNEETNNGICEIEIGSLHPFPNHPFQVKDDKKMEELSESITQYGVLVPGIVRLRESGGYEL
VAGHRRKRACELAGLEKMPVIIKDLTDDEATVIMVDSNIQREELLISEKAFAYKMKYEALKRQGKRSDLTSCQVGKKLAA
EEVSQNTGDSSRQILRYIHLTELIAELLELADEKKLPFNTAVEVSYLRSEEQQILLQYMSNHNMVPSMKQAKELKQIAKE
QMLTYSEIDQICMNESTEKVQVQIPAKKLKQYFPESYSKAQMEEVIFMLLASWAEKQ

Specific function: Required for the initiation of sporulation and for normal chromosome segregation. Antagonizes sporulation inhibition of soj. It probably interacts with a specific DNA site and other proteins involved in partitioning and cell division, and antagonizes soj

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 33992; Mature: 33860

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSKKRATPISLQPLDALFGTNEETNNGICEIEIGSLHPFPNHPFQVKDDKKMEELSESI
CCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
TQYGVLVPGIVRLRESGGYELVAGHRRKRACELAGLEKMPVIIKDLTDDEATVIMVDSNI
HHHCCHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCCCHHEEECCCCCEEEEEECCCC
QREELLISEKAFAYKMKYEALKRQGKRSDLTSCQVGKKLAAEEVSQNTGDSSRQILRYIH
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LTELIAELLELADEKKLPFNTAVEVSYLRSEEQQILLQYMSNHNMVPSMKQAKELKQIAK
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
EQMLTYSEIDQICMNESTEKVQVQIPAKKLKQYFPESYSKAQMEEVIFMLLASWAEKQ
HHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PSKKRATPISLQPLDALFGTNEETNNGICEIEIGSLHPFPNHPFQVKDDKKMEELSESI
CCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
TQYGVLVPGIVRLRESGGYELVAGHRRKRACELAGLEKMPVIIKDLTDDEATVIMVDSNI
HHHCCHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCCCHHEEECCCCCEEEEEECCCC
QREELLISEKAFAYKMKYEALKRQGKRSDLTSCQVGKKLAAEEVSQNTGDSSRQILRYIH
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LTELIAELLELADEKKLPFNTAVEVSYLRSEEQQILLQYMSNHNMVPSMKQAKELKQIAK
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
EQMLTYSEIDQICMNESTEKVQVQIPAKKLKQYFPESYSKAQMEEVIFMLLASWAEKQ
HHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 1552862; 9384377; 1900505; 8071208 [H]