| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925747
Identifier: 238925747
GI number: 238925747
Start: 3213493
End: 3213948
Strand: Reverse
Name: 238925747
Synonym: EUBREC_3404
Alternate gene names: NA
Gene position: 3213948-3213493 (Counterclockwise)
Preceding gene: 238925748
Following gene: 238925746
Centisome position: 93.17
GC content: 41.45
Gene sequence:
>456_bases ATGAAGACAGCAATAGTATATGCATCAGTGCATCATGGAAACACAAAAAAGATAATTGACGAGATAGCAAAGACAAAAGA TGTCGAGCTGATAGATGCGACACAGACGGTAGAGAAAGACCTGTCGGAATATGATTTAATCGGTTTTGCATCAGGAGTAT ATGGTGGAAAGTTTCATCAGTCGGTGCTTAAGTTTGCATCAGTCAATCTCACAGACAATAAAAATGTATTTCTTATCTGC ACATATGGCGGCAGACCTGTCTTTAAGTCAATTGAGCAGGTGATAGCATACAAACATGACAACATTGTTGGAAGGTTTTC ATGCAAGGGATTTGATACGTTTGGTCCGTTCAAGCTGATTGGAGGGGTATCAAAGGGGCATCCGGATGAGAAAGACCTTG CTGCGGCAGTGGAGTTTTACAACGGACTAACAGAACAGCCAGTGTTTCTGAAATAG
Upstream 100 bases:
>100_bases GGGAATTGTGTTTACAGACTATGAGACCGGAAAGAAAAAGCTGGAGCAGATGCTGATGGCAAAATCAAAGGAAGACTAAT AAAGGATTGGAGCATTAAAG
Downstream 100 bases:
>100_bases GAAAACTTTGAAATAGGAGGATTGAATGTGTGAAGAATGAAATCAATGAATCTGTATATGATATCAATATGGATAAGTTA TGTCAGAATTCAATTGAATT
Product: flavodoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MKTAIVYASVHHGNTKKIIDEIAKTKDVELIDATQTVEKDLSEYDLIGFASGVYGGKFHQSVLKFASVNLTDNKNVFLIC TYGGRPVFKSIEQVIAYKHDNIVGRFSCKGFDTFGPFKLIGGVSKGHPDEKDLAAAVEFYNGLTEQPVFLK
Sequences:
>Translated_151_residues MKTAIVYASVHHGNTKKIIDEIAKTKDVELIDATQTVEKDLSEYDLIGFASGVYGGKFHQSVLKFASVNLTDNKNVFLIC TYGGRPVFKSIEQVIAYKHDNIVGRFSCKGFDTFGPFKLIGGVSKGHPDEKDLAAAVEFYNGLTEQPVFLK >Mature_151_residues MKTAIVYASVHHGNTKKIIDEIAKTKDVELIDATQTVEKDLSEYDLIGFASGVYGGKFHQSVLKFASVNLTDNKNVFLIC TYGGRPVFKSIEQVIAYKHDNIVGRFSCKGFDTFGPFKLIGGVSKGHPDEKDLAAAVEFYNGLTEQPVFLK
Specific function: Unknown
COG id: COG0716
COG function: function code C; Flavodoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008254 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16652; Mature: 16652
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTAIVYASVHHGNTKKIIDEIAKTKDVELIDATQTVEKDLSEYDLIGFASGVYGGKFHQ CCCEEEEEEECCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHH SVLKFASVNLTDNKNVFLICTYGGRPVFKSIEQVIAYKHDNIVGRFSCKGFDTFGPFKLI HHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHH GGVSKGHPDEKDLAAAVEFYNGLTEQPVFLK CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKTAIVYASVHHGNTKKIIDEIAKTKDVELIDATQTVEKDLSEYDLIGFASGVYGGKFHQ CCCEEEEEEECCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHH SVLKFASVNLTDNKNVFLICTYGGRPVFKSIEQVIAYKHDNIVGRFSCKGFDTFGPFKLI HHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHH GGVSKGHPDEKDLAAAVEFYNGLTEQPVFLK CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]