| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is yhcG [H]
Identifier: 238925746
GI number: 238925746
Start: 3212357
End: 3213463
Strand: Reverse
Name: yhcG [H]
Synonym: EUBREC_3403
Alternate gene names: 238925746
Gene position: 3213463-3212357 (Counterclockwise)
Preceding gene: 238925747
Following gene: 238925745
Centisome position: 93.15
GC content: 34.33
Gene sequence:
>1107_bases GTGAAGAATGAAATCAATGAATCTGTATATGATATCAATATGGATAAGTTATGTCAGAATTCAATTGAATTAATTAAATA TGCACGAAACATTACTGCAAAGCAGGTAAATAATGTCCAGATAATGACCTATTATTCTCTTGGCAGGTGGATTGTAGAAG TACAGCAGCAGGGAAAACACAGGGCTGAATACGGTAAAAAAATCATAATAAATCTTTCTAAAAAATTAACAGAAGAATTT GGAAAAGGCTTTTCAGAATCTACGCTGGAAAAGGCAAGAAAGTTTTATTTAACATATAAGGATCGAATTTCGGAAACACT GTTTACGGAATTTGCAATCAAGAAATCGGAAACGGTGTTTACGATTTTTGAAGAGGAGCATCCGTTTGTGGTAACATGGT CTCATTATCTACAATTGATGAGAATAGAAAATGAGGATGAACGCTCATTTTATGAGATAGAAGCTGCCAGAGAGAAGTGG GGAGTCAGAGATTTGTCACGTCAGTATAATTCTTCTCTTTATGAGAGACTTGCGTTAAGCATGGATAAGGACAAAGTGCA ACGCTTATCACAGGAAGGAAATGTGATTACAACCTCAAAGGATGTGCTGAAGGATCCATATGTTTTGGAATTTGTAGGTC TTGAAGATAAATATAATTATTCAGAAACTGATTTAGAAAACAGGCTGTTAGATAATTTGCAGCAGTTTCTTTTGGAATTG GGAAAAGGATTTACTTTTGTGGCAAGACAGAAAAGATTTTCATTCGAAGAAGATCATTTCAGAGTGGATCTTGTTTTTTA TAACAGACTGTTGAAATGCTTTGTATTATTTGATTTAAAAATTGGCAAATTAAAGCACCAGGATCTGGGGCAAATGCAGA TGTATGTCAATTACTATGATAGATACGAAAAAACAGAGGAAGAAAATCCTACCATTGGTGTATTGTTGTGCAATGAAAAA AATGATGCGATGGTTGAACTGACATTGCCGGAGGATTCTAATATTTATGCATCACAGTATAAACTGTATCTGCCGGATAA GAAACTATTACAGGATAAATTGAAAGAATGGTTACAGGAAGAAGGTGGTGCTGAAGATGAAATTTAA
Upstream 100 bases:
>100_bases ATGAGAAAGACCTTGCTGCGGCAGTGGAGTTTTACAACGGACTAACAGAACAGCCAGTGTTTCTGAAATAGGAAAACTTT GAAATAGGAGGATTGAATGT
Downstream 100 bases:
>100_bases TTTTAAAATACAACAGTACCAGGCAGATGAAAGATATGTCACAGATTGAGTTGAAATTCGATTCAGAACAGAATGCATTT GGTTTAACAGAGGATTTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MKNEINESVYDINMDKLCQNSIELIKYARNITAKQVNNVQIMTYYSLGRWIVEVQQQGKHRAEYGKKIIINLSKKLTEEF GKGFSESTLEKARKFYLTYKDRISETLFTEFAIKKSETVFTIFEEEHPFVVTWSHYLQLMRIENEDERSFYEIEAAREKW GVRDLSRQYNSSLYERLALSMDKDKVQRLSQEGNVITTSKDVLKDPYVLEFVGLEDKYNYSETDLENRLLDNLQQFLLEL GKGFTFVARQKRFSFEEDHFRVDLVFYNRLLKCFVLFDLKIGKLKHQDLGQMQMYVNYYDRYEKTEEENPTIGVLLCNEK NDAMVELTLPEDSNIYASQYKLYLPDKKLLQDKLKEWLQEEGGAEDEI
Sequences:
>Translated_368_residues MKNEINESVYDINMDKLCQNSIELIKYARNITAKQVNNVQIMTYYSLGRWIVEVQQQGKHRAEYGKKIIINLSKKLTEEF GKGFSESTLEKARKFYLTYKDRISETLFTEFAIKKSETVFTIFEEEHPFVVTWSHYLQLMRIENEDERSFYEIEAAREKW GVRDLSRQYNSSLYERLALSMDKDKVQRLSQEGNVITTSKDVLKDPYVLEFVGLEDKYNYSETDLENRLLDNLQQFLLEL GKGFTFVARQKRFSFEEDHFRVDLVFYNRLLKCFVLFDLKIGKLKHQDLGQMQMYVNYYDRYEKTEEENPTIGVLLCNEK NDAMVELTLPEDSNIYASQYKLYLPDKKLLQDKLKEWLQEEGGAEDEI >Mature_368_residues MKNEINESVYDINMDKLCQNSIELIKYARNITAKQVNNVQIMTYYSLGRWIVEVQQQGKHRAEYGKKIIINLSKKLTEEF GKGFSESTLEKARKFYLTYKDRISETLFTEFAIKKSETVFTIFEEEHPFVVTWSHYLQLMRIENEDERSFYEIEAAREKW GVRDLSRQYNSSLYERLALSMDKDKVQRLSQEGNVITTSKDVLKDPYVLEFVGLEDKYNYSETDLENRLLDNLQQFLLEL GKGFTFVARQKRFSFEEDHFRVDLVFYNRLLKCFVLFDLKIGKLKHQDLGQMQMYVNYYDRYEKTEEENPTIGVLLCNEK NDAMVELTLPEDSNIYASQYKLYLPDKKLLQDKLKEWLQEEGGAEDEI
Specific function: Unknown
COG id: COG4804
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789614, Length=350, Percent_Identity=38.5714285714286, Blast_Score=242, Evalue=3e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009362 [H]
Pfam domain/function: PF06250 DUF1016 [H]
EC number: NA
Molecular weight: Translated: 43787; Mature: 43787
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNEINESVYDINMDKLCQNSIELIKYARNITAKQVNNVQIMTYYSLGRWIVEVQQQGKH CCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCHHHHCCCEEEEEEEHHHHHHHHHHHCCCH RAEYGKKIIINLSKKLTEEFGKGFSESTLEKARKFYLTYKDRISETLFTEFAIKKSETVF HHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE TIFEEEHPFVVTWSHYLQLMRIENEDERSFYEIEAAREKWGVRDLSRQYNSSLYERLALS EEEECCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC MDKDKVQRLSQEGNVITTSKDVLKDPYVLEFVGLEDKYNYSETDLENRLLDNLQQFLLEL CCHHHHHHHHHCCCEEECCHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH GKGFTFVARQKRFSFEEDHFRVDLVFYNRLLKCFVLFDLKIGKLKHQDLGQMQMYVNYYD CCCCEEEEHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH RYEKTEEENPTIGVLLCNEKNDAMVELTLPEDSNIYASQYKLYLPDKKLLQDKLKEWLQE HHHCCCCCCCEEEEEEECCCCCEEEEEECCCCCCEEEEEEEEECCCHHHHHHHHHHHHHH EGGAEDEI CCCCCCCC >Mature Secondary Structure MKNEINESVYDINMDKLCQNSIELIKYARNITAKQVNNVQIMTYYSLGRWIVEVQQQGKH CCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCHHHHCCCEEEEEEEHHHHHHHHHHHCCCH RAEYGKKIIINLSKKLTEEFGKGFSESTLEKARKFYLTYKDRISETLFTEFAIKKSETVF HHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE TIFEEEHPFVVTWSHYLQLMRIENEDERSFYEIEAAREKWGVRDLSRQYNSSLYERLALS EEEECCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC MDKDKVQRLSQEGNVITTSKDVLKDPYVLEFVGLEDKYNYSETDLENRLLDNLQQFLLEL CCHHHHHHHHHCCCEEECCHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH GKGFTFVARQKRFSFEEDHFRVDLVFYNRLLKCFVLFDLKIGKLKHQDLGQMQMYVNYYD CCCCEEEEHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH RYEKTEEENPTIGVLLCNEKNDAMVELTLPEDSNIYASQYKLYLPDKKLLQDKLKEWLQE HHHCCCCCCCEEEEEEECCCCCEEEEEECCCCCCEEEEEEEEECCCHHHHHHHHHHHHHH EGGAEDEI CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]