Click here to switch to the map view.

The map label for this gene is 238925689

Identifier: 238925689

GI number: 238925689

Start: 3168718

End: 3169212

Strand: Reverse

Name: 238925689

Synonym: EUBREC_3346

Alternate gene names: NA

Gene position: 3169212-3168718 (Counterclockwise)

Preceding gene: 238925690

Following gene: 238925688

Centisome position: 91.87

GC content: 41.01

Gene sequence:

>495_bases
ATGATTGTTGTATCCGATACAACACCACTGATATCACTTCTTAAAATTAATCGTATAGATTTAATGGAAAAGCTGTTTGG
AGCGGTTATGATTCCAACGGCGGTATTTGATGAGCTGACAGCCGATAAACGTTTTCAGCTTGAAGCGAATCAGATTACAC
AGACGAAATTTATTGTAGTTAAGCCTGTAACAAATCCGGAATCAGCCAGTGTATTAAAACGAGCAACCGGTCTTGATCAG
GGGGAGAGTGAGGCAATAGTTTTAACAGATGAATTGAAAGCAGATTTGTTATTAATGGATGAGGCAAAAGGCAGAAATGT
ATCAACTCAGATGGGACTTAAAATTATGGGGACGATAGGTATTCTCATGGCGGCATATGAGGAACACGAACTGACATCGG
ATGAGGTCAGAGAATGCGTTGATGGTTTGCAACGTGCAGGACGGCATATTGGACAACGGCACTATCAGATGCTGCTAAGT
AGACTGAAAGACTAA

Upstream 100 bases:

>100_bases
TGTATGATAAGTTGGGATATTCATATTTTGATATGATAATGGATGATCTGGATAATGAAATGAATACTTTCAGAGAACTC
AAGAAGAAGGGGGAGGCAGT

Downstream 100 bases:

>100_bases
AAAGTGTTCATATAAAAATAAAACGTAATTTCTTGCATAACTCCATAGTATATGTTACGATTTTACTGTTGTTAAGACGA
ATCTAAAGGATGATGCTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MIVVSDTTPLISLLKINRIDLMEKLFGAVMIPTAVFDELTADKRFQLEANQITQTKFIVVKPVTNPESASVLKRATGLDQ
GESEAIVLTDELKADLLLMDEAKGRNVSTQMGLKIMGTIGILMAAYEEHELTSDEVRECVDGLQRAGRHIGQRHYQMLLS
RLKD

Sequences:

>Translated_164_residues
MIVVSDTTPLISLLKINRIDLMEKLFGAVMIPTAVFDELTADKRFQLEANQITQTKFIVVKPVTNPESASVLKRATGLDQ
GESEAIVLTDELKADLLLMDEAKGRNVSTQMGLKIMGTIGILMAAYEEHELTSDEVRECVDGLQRAGRHIGQRHYQMLLS
RLKD
>Mature_164_residues
MIVVSDTTPLISLLKINRIDLMEKLFGAVMIPTAVFDELTADKRFQLEANQITQTKFIVVKPVTNPESASVLKRATGLDQ
GESEAIVLTDELKADLLLMDEAKGRNVSTQMGLKIMGTIGILMAAYEEHELTSDEVRECVDGLQRAGRHIGQRHYQMLLS
RLKD

Specific function: Unknown

COG id: COG2405

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18257; Mature: 18257

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVVSDTTPLISLLKINRIDLMEKLFGAVMIPTAVFDELTADKRFQLEANQITQTKFIVV
CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEE
KPVTNPESASVLKRATGLDQGESEAIVLTDELKADLLLMDEAKGRNVSTQMGLKIMGTIG
EECCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHH
ILMAAYEEHELTSDEVRECVDGLQRAGRHIGQRHYQMLLSRLKD
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIVVSDTTPLISLLKINRIDLMEKLFGAVMIPTAVFDELTADKRFQLEANQITQTKFIVV
CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEE
KPVTNPESASVLKRATGLDQGESEAIVLTDELKADLLLMDEAKGRNVSTQMGLKIMGTIG
EECCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHH
ILMAAYEEHELTSDEVRECVDGLQRAGRHIGQRHYQMLLSRLKD
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA