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The map label for this gene is ydjG [H]

Identifier: 238925151

GI number: 238925151

Start: 2681867

End: 2683507

Strand: Direct

Name: ydjG [H]

Synonym: EUBREC_2804

Alternate gene names: 238925151

Gene position: 2681867-2683507 (Clockwise)

Preceding gene: 238925150

Following gene: 238925152

Centisome position: 77.74

GC content: 46.37

Gene sequence:

>1641_bases
ATGTTCGCATGTAAAAATTGCGGTGGAAATGTGAAGTTTGACATCAAATCAGGCCAGTTAGCCTGTGAATACTGTCATTC
ACTTTTCGACCCTTACGCGTACGAGGACAAAACCTCTGACGCCGAGGTCCAGAAGGACTTCGACGCAACCATTTTCACAT
GCCCTCAGTGCGGAGGAGAAATCCTGAGCACAGACGATACCGCAGCAGGCTTCTGCAGCTTCTGCGGTGCATCAACTGTG
CTCTACAGCCGCATGCAAAAGGAGCACAAGCCGGCTTATATCATACCATTTGCAAAGAGCAAGGATGACTGTAAGCAGGC
CTACATGAGCCTCATGAAAAAGGCTATTTTCGCGCCAAAGGAGCTTAAGGATCCTAAGTTTATCGACGGATTCAGAGGTA
TCTACATGCCTTACTGGACATATTATGTAACCCAGAAGGCTCCTATTTCACTTCCGGCGAAAAGATCCCACCGTTCAGGA
GATTACATCATTACAGACCATTACAGGCTCGAGGGAGATCTCGACGCCTACTACAAGGGACTGTCCTACGATGCATCTTC
ATCATTTGATGACAGCATCAGCGAAAAACTTGCGCCATATGATGTGAAGAATATGAAGCGCTTTACACCGGCATTCTTAA
GTGGTTTTTACGCTGATACAGCTGATTTACCATCAACTATTTACGCAAGTGACGCAATGGATGCTGCCTGCACAAACACA
GTAAGCGAAATAAGTAAAGAGCCTGCCTTTACCGGCTTGTCAGTCGACAGTGACTCCGCTGCTCTTTCGCCTTTAAGTCT
TGGCACTACTGTAAAAGAAACCGATTACTCGATGTTTCCGGTATGGTTTTTGTCATACCGCAATAAGGATCGTGTGGCAT
ATGCCACAGTAAACGGCCAGACCGGCAAGGTTGTTGCAGATCTGCCTATATCTGTCGGTAAATTCCTGCTCGGCTCACTC
ATTGCGGCAATTCCGGTATACATTTTATTATGTCTGCTGACGGTTCTAACTCCCGGAATGACTCTCACCATAGTCGGTGT
GCTTGCGATTATCGCAAATATCTGTTACTCACAGGAGCTGACCATGATTGCTGTAAAGGAAGCCGGTACCGAGGATAAGG
GCCGTATCGCAAAGGAACAGCCGGAGGCACTTGGTGCAATCAACAACCGCAGACGCCTTAAGGCTGCAAAAAAGGCCACG
AAAACCATAAAGAAAAAGACAAACACATCGTTTATAGCTTACTTTATACTTTTTATATTTGTCATTCAATTTGTTCCTGC
TCTGTTTGCAATCATTGCAGGTATCGGAGGCAGCTTTGGCAATGCAGACGGCAGCCTGATTTTATTTGTTATTTTGACCA
TCATATCATTTATTTTTTCAATCAGAGCCTTCTCAAGCTTTGACAGGATGCCCGGACACAAGGGAGTTGCCGGACTCATC
TTTGGCATGGTATCCATGCTTATTGGCGATGCTGTTCTTTTGTTCCAGCCGGTGCTCGATGCATGGTACTATGGCGCAGC
TTTTATCATCATCGCCTCAGTGCTTATCACACTGATTAATGTCATCCGCGCATTCAATGTGCTTACAACGCGCAAGCTGC
CACAGTTTGCCACACATAAGGGAGGTGATGACCGTGCATAG

Upstream 100 bases:

>100_bases
GAGCTGTTTCCACTGCTCATCCTCTTCCATCCGTCAATCTGGAAGGAATTATTTATTCAAGCAGATAAAAAAGTAAAAGG
GAATAGAAAGGAGAAACAAA

Downstream 100 bases:

>100_bases
AAATAATTATAAAAGTCCTTTTTTGCATTGTATAAAATGCAGGTGTTCAGCTTTGTTTACATTATTTTTGCTTGTTACAA
TCCTTGTTTTGAGCAGCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 546; Mature: 546

Protein sequence:

>546_residues
MFACKNCGGNVKFDIKSGQLACEYCHSLFDPYAYEDKTSDAEVQKDFDATIFTCPQCGGEILSTDDTAAGFCSFCGASTV
LYSRMQKEHKPAYIIPFAKSKDDCKQAYMSLMKKAIFAPKELKDPKFIDGFRGIYMPYWTYYVTQKAPISLPAKRSHRSG
DYIITDHYRLEGDLDAYYKGLSYDASSSFDDSISEKLAPYDVKNMKRFTPAFLSGFYADTADLPSTIYASDAMDAACTNT
VSEISKEPAFTGLSVDSDSAALSPLSLGTTVKETDYSMFPVWFLSYRNKDRVAYATVNGQTGKVVADLPISVGKFLLGSL
IAAIPVYILLCLLTVLTPGMTLTIVGVLAIIANICYSQELTMIAVKEAGTEDKGRIAKEQPEALGAINNRRRLKAAKKAT
KTIKKKTNTSFIAYFILFIFVIQFVPALFAIIAGIGGSFGNADGSLILFVILTIISFIFSIRAFSSFDRMPGHKGVAGLI
FGMVSMLIGDAVLLFQPVLDAWYYGAAFIIIASVLITLINVIRAFNVLTTRKLPQFATHKGGDDRA

Sequences:

>Translated_546_residues
MFACKNCGGNVKFDIKSGQLACEYCHSLFDPYAYEDKTSDAEVQKDFDATIFTCPQCGGEILSTDDTAAGFCSFCGASTV
LYSRMQKEHKPAYIIPFAKSKDDCKQAYMSLMKKAIFAPKELKDPKFIDGFRGIYMPYWTYYVTQKAPISLPAKRSHRSG
DYIITDHYRLEGDLDAYYKGLSYDASSSFDDSISEKLAPYDVKNMKRFTPAFLSGFYADTADLPSTIYASDAMDAACTNT
VSEISKEPAFTGLSVDSDSAALSPLSLGTTVKETDYSMFPVWFLSYRNKDRVAYATVNGQTGKVVADLPISVGKFLLGSL
IAAIPVYILLCLLTVLTPGMTLTIVGVLAIIANICYSQELTMIAVKEAGTEDKGRIAKEQPEALGAINNRRRLKAAKKAT
KTIKKKTNTSFIAYFILFIFVIQFVPALFAIIAGIGGSFGNADGSLILFVILTIISFIFSIRAFSSFDRMPGHKGVAGLI
FGMVSMLIGDAVLLFQPVLDAWYYGAAFIIIASVLITLINVIRAFNVLTTRKLPQFATHKGGDDRA
>Mature_546_residues
MFACKNCGGNVKFDIKSGQLACEYCHSLFDPYAYEDKTSDAEVQKDFDATIFTCPQCGGEILSTDDTAAGFCSFCGASTV
LYSRMQKEHKPAYIIPFAKSKDDCKQAYMSLMKKAIFAPKELKDPKFIDGFRGIYMPYWTYYVTQKAPISLPAKRSHRSG
DYIITDHYRLEGDLDAYYKGLSYDASSSFDDSISEKLAPYDVKNMKRFTPAFLSGFYADTADLPSTIYASDAMDAACTNT
VSEISKEPAFTGLSVDSDSAALSPLSLGTTVKETDYSMFPVWFLSYRNKDRVAYATVNGQTGKVVADLPISVGKFLLGSL
IAAIPVYILLCLLTVLTPGMTLTIVGVLAIIANICYSQELTMIAVKEAGTEDKGRIAKEQPEALGAINNRRRLKAAKKAT
KTIKKKTNTSFIAYFILFIFVIQFVPALFAIIAGIGGSFGNADGSLILFVILTIISFIFSIRAFSSFDRMPGHKGVAGLI
FGMVSMLIGDAVLLFQPVLDAWYYGAAFIIIASVLITLINVIRAFNVLTTRKLPQFATHKGGDDRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004039
- InterPro:   IPR013137 [H]

Pfam domain/function: PF08271 TFIIB_Zn_Ribbon [H]

EC number: NA

Molecular weight: Translated: 59830; Mature: 59830

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFACKNCGGNVKFDIKSGQLACEYCHSLFDPYAYEDKTSDAEVQKDFDATIFTCPQCGGE
CCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCEEEECCCCCCC
ILSTDDTAAGFCSFCGASTVLYSRMQKEHKPAYIIPFAKSKDDCKQAYMSLMKKAIFAPK
EECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCH
ELKDPKFIDGFRGIYMPYWTYYVTQKAPISLPAKRSHRSGDYIITDHYRLEGDLDAYYKG
HCCCCCHHCCHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCEEEEECEEECCCHHHHHCC
LSYDASSSFDDSISEKLAPYDVKNMKRFTPAFLSGFYADTADLPSTIYASDAMDAACTNT
CCCCCCCCCCHHHHHHCCCCCHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
VSEISKEPAFTGLSVDSDSAALSPLSLGTTVKETDYSMFPVWFLSYRNKDRVAYATVNGQ
HHHHHCCCCCCCCCCCCCCCCCCCHHCCCCEECCCCCCCHHHHEEECCCCCEEEEEECCC
TGKVVADLPISVGKFLLGSLIAAIPVYILLCLLTVLTPGMTLTIVGVLAIIANICYSQEL
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
TMIAVKEAGTEDKGRIAKEQPEALGAINNRRRLKAAKKATKTIKKKTNTSFIAYFILFIF
EEEEEECCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
VIQFVPALFAIIAGIGGSFGNADGSLILFVILTIISFIFSIRAFSSFDRMPGHKGVAGLI
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
FGMVSMLIGDAVLLFQPVLDAWYYGAAFIIIASVLITLINVIRAFNVLTTRKLPQFATHK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
GGDDRA
CCCCCC
>Mature Secondary Structure
MFACKNCGGNVKFDIKSGQLACEYCHSLFDPYAYEDKTSDAEVQKDFDATIFTCPQCGGE
CCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCEEEECCCCCCC
ILSTDDTAAGFCSFCGASTVLYSRMQKEHKPAYIIPFAKSKDDCKQAYMSLMKKAIFAPK
EECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCH
ELKDPKFIDGFRGIYMPYWTYYVTQKAPISLPAKRSHRSGDYIITDHYRLEGDLDAYYKG
HCCCCCHHCCHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCEEEEECEEECCCHHHHHCC
LSYDASSSFDDSISEKLAPYDVKNMKRFTPAFLSGFYADTADLPSTIYASDAMDAACTNT
CCCCCCCCCCHHHHHHCCCCCHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
VSEISKEPAFTGLSVDSDSAALSPLSLGTTVKETDYSMFPVWFLSYRNKDRVAYATVNGQ
HHHHHCCCCCCCCCCCCCCCCCCCHHCCCCEECCCCCCCHHHHEEECCCCCEEEEEECCC
TGKVVADLPISVGKFLLGSLIAAIPVYILLCLLTVLTPGMTLTIVGVLAIIANICYSQEL
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
TMIAVKEAGTEDKGRIAKEQPEALGAINNRRRLKAAKKATKTIKKKTNTSFIAYFILFIF
EEEEEECCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
VIQFVPALFAIIAGIGGSFGNADGSLILFVILTIISFIFSIRAFSSFDRMPGHKGVAGLI
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
FGMVSMLIGDAVLLFQPVLDAWYYGAAFIIIASVLITLINVIRAFNVLTTRKLPQFATHK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
GGDDRA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9455482; 9384377 [H]