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The map label for this gene is comF [H]

Identifier: 238925132

GI number: 238925132

Start: 2661916

End: 2662695

Strand: Reverse

Name: comF [H]

Synonym: EUBREC_2785

Alternate gene names: 238925132

Gene position: 2662695-2661916 (Counterclockwise)

Preceding gene: 238925133

Following gene: 238925131

Centisome position: 77.19

GC content: 46.28

Gene sequence:

>780_bases
ATGGGGATATTACAGTCAGGGGGATTAGTGAACAAAATAAAGGATATTGGGAGAGGCGTAATCAATCTGGTATTTCCACC
GCGCTGTCCGGTATGTGATGGTATAATTGGTCCGGTTGAGAGATATATACACAGCAGATGCTGTGAAAAGCTCTTTCCGG
TTGAGCAGCCGCAGTGTATGCGCTGCGGGAAGCCGGTTTTGTCTGAGCGAAGAGAGTATTGTGACGACTGTGCACGGGCA
CTAGAGCATCACAGGCAGATGCGGGAAGATGACAGCTACAGGCAGGGCAAGGCGCTTTTTGCATACAAGGGCAGCATAAA
GCAGACCATGTACAGGTTCAAGTATTCAAACAGACGTGAGTATGCGGCTTATTTTGCACAGACAGCAGTGGAAAGATATT
CGGACTGGATACTAAGATGTGGGATAGATGTTATTATTCCGGTGCCGATGCACCGTAAAAAAATGCGCCAGAGAGGCTAC
AATCAGGCAGAGTGTTTTGCAAAGGCATTGTCTGAAAAAACAGGCATAAGGATGGTAAAAGGGCTTGTGCGCAGAGTGAA
AAATACCAGTCCACTCAAGACAATGGGGTATGTTGAACGCAGAAATTGTCTCGAGGGGGCTTTTCAAGTGGCGGATAGTA
TTGTACAATATGACCAAATACTAATAGTAGATGATATATATACTACAGGCAGTACGGCGGAGTCGATTGGGCACGAGATA
GCAAAGAAATGTCCTGGCCGTGTATATGTGCTGTGTATTTGCATAGGACAGGGAAGTTAG

Upstream 100 bases:

>100_bases
AATTCTAGAATATACGTTTTATAACAGGCAGCCGTGAGGGCGATGATATGTCCCTGCATTGCAGGAATGTATTGTCGCTT
TTTTGTTAATATTGTTACAA

Downstream 100 bases:

>100_bases
GAGGGTTTTATCAGATGAGAATATCTAATTGCAAGGGCTGTGGCAGAATATTTAATGTACTGTCAGATGAGCAGTACTGC
CCGAACTGCCAGAAAAAAAT

Product: putative amidophosphoribosyltransferase

Products: NA

Alternate protein names: DNA transformation protein ComF; Protein COM101A [H]

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MGILQSGGLVNKIKDIGRGVINLVFPPRCPVCDGIIGPVERYIHSRCCEKLFPVEQPQCMRCGKPVLSERREYCDDCARA
LEHHRQMREDDSYRQGKALFAYKGSIKQTMYRFKYSNRREYAAYFAQTAVERYSDWILRCGIDVIIPVPMHRKKMRQRGY
NQAECFAKALSEKTGIRMVKGLVRRVKNTSPLKTMGYVERRNCLEGAFQVADSIVQYDQILIVDDIYTTGSTAESIGHEI
AKKCPGRVYVLCICIGQGS

Sequences:

>Translated_259_residues
MGILQSGGLVNKIKDIGRGVINLVFPPRCPVCDGIIGPVERYIHSRCCEKLFPVEQPQCMRCGKPVLSERREYCDDCARA
LEHHRQMREDDSYRQGKALFAYKGSIKQTMYRFKYSNRREYAAYFAQTAVERYSDWILRCGIDVIIPVPMHRKKMRQRGY
NQAECFAKALSEKTGIRMVKGLVRRVKNTSPLKTMGYVERRNCLEGAFQVADSIVQYDQILIVDDIYTTGSTAESIGHEI
AKKCPGRVYVLCICIGQGS
>Mature_258_residues
GILQSGGLVNKIKDIGRGVINLVFPPRCPVCDGIIGPVERYIHSRCCEKLFPVEQPQCMRCGKPVLSERREYCDDCARAL
EHHRQMREDDSYRQGKALFAYKGSIKQTMYRFKYSNRREYAAYFAQTAVERYSDWILRCGIDVIIPVPMHRKKMRQRGYN
QAECFAKALSEKTGIRMVKGLVRRVKNTSPLKTMGYVERRNCLEGAFQVADSIVQYDQILIVDDIYTTGSTAESIGHEIA
KKCPGRVYVLCICIGQGS

Specific function: Involved in transformation (competence for DNA uptake) [H]

COG id: COG1040

COG function: function code R; Predicted amidophosphoribosyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ComF/GntX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005222
- InterPro:   IPR000836 [H]

Pfam domain/function: PF00156 Pribosyltran [H]

EC number: NA

Molecular weight: Translated: 29568; Mature: 29437

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
5.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGILQSGGLVNKIKDIGRGVINLVFPPRCPVCDGIIGPVERYIHSRCCEKLFPVEQPQCM
CCCCCCCCHHHHHHHHCCHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHH
RCGKPVLSERREYCDDCARALEHHRQMREDDSYRQGKALFAYKGSIKQTMYRFKYSNRRE
HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCEEEEECCHHHHHHHHHHHCCCHH
YAAYFAQTAVERYSDWILRCGIDVIIPVPMHRKKMRQRGYNQAECFAKALSEKTGIRMVK
HHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
GLVRRVKNTSPLKTMGYVERRNCLEGAFQVADSIVQYDQILIVDDIYTTGSTAESIGHEI
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHH
AKKCPGRVYVLCICIGQGS
HHHCCCCEEEEEEEECCCC
>Mature Secondary Structure 
GILQSGGLVNKIKDIGRGVINLVFPPRCPVCDGIIGPVERYIHSRCCEKLFPVEQPQCM
CCCCCCCHHHHHHHHCCHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHH
RCGKPVLSERREYCDDCARALEHHRQMREDDSYRQGKALFAYKGSIKQTMYRFKYSNRRE
HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCEEEEECCHHHHHHHHHHHCCCHH
YAAYFAQTAVERYSDWILRCGIDVIIPVPMHRKKMRQRGYNQAECFAKALSEKTGIRMVK
HHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
GLVRRVKNTSPLKTMGYVERRNCLEGAFQVADSIVQYDQILIVDDIYTTGSTAESIGHEI
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHH
AKKCPGRVYVLCICIGQGS
HHHCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1916268; 1856167; 7542800 [H]