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The map label for this gene is yjbG [H]

Identifier: 238924952

GI number: 238924952

Start: 2478001

End: 2479806

Strand: Reverse

Name: yjbG [H]

Synonym: EUBREC_2603

Alternate gene names: 238924952

Gene position: 2479806-2478001 (Counterclockwise)

Preceding gene: 238924953

Following gene: 238924951

Centisome position: 71.88

GC content: 45.35

Gene sequence:

>1806_bases
ATGAGTGAGAAAAGGCTTCAAAAGAGAGATGAAATCTCAGATGAGTACAAATGGAAGCTTGAGGATATGTATGAGACAGA
TGAGCTGTGGGAGGCTGAGTGTGAAAAAGCGTCACAGATTGCAGAAAAGCTATCTGGATTTAAGGGACATCTGGCCGACA
GTGCAGCAACGCTGCTTGATTTTTTTAAGAAGCAGGATGAGCTGTCTTATTATTTGGAGCGTATAGTGGTCTATGCGAAT
GAGCGCTCACATCAGGACACTGCTGTGTCGAAATATCAGGCATATGTGTCAAAGGCAGAGACACTGACTGTTCAGGCATC
AGGTGCGCTGGCATTTGCGAGTCCGGAGATTTTGCAGATAGATGATAAAAGGCTTGAGAGCTTTTACAGTGAGAGCAATG
AGCTTATGCACTATAAGCGTGCGATTGATGAGATAATGCGTCAGAAAGAGCATACCTTATCGGCTGCAGAGGAGAATATC
CTGGCACAGTGCGGTGAGATGGCTGCAGCACCGGAGAATATATTCAGCATGTTCAACAACGCGGATATCAAATTCCCGTA
TATCACTGATGTCGAGGGAAATAAAATCCGTATCACGCATGGCAATTTCATAGATTTTTTAAGCAGCAAGGACAGAAGCC
TGCGCAAGCAGGTGTTCCGTGGAGTGTATGATTCGTACAAGAAGTGGAGCAATACTGTTTCCATGATGTACATCAGCAAG
CTGAAAAATGACACTTTTTATGCAAGGGTAAGAAAATATGACAGCGCAAGGACCATGTATTTATCAGGTGGTGATATTCC
TGAGAGTGTCTATGACAATCTGATCGAGACGGTTCACGCACATCTACCGGCTCTGCACAGGTACATGGCGCTTAGGAAGA
AGCTTTTAGGTGTGGAGCATCTGCATATGTATGATTTGTTTGCACCGATTGTGGACAATGTACAGACCACCTACACCTAT
GATGAGGCGAAAAAGCTTGTGGCAAAGGCGCTTGAGCCTATGGGCGATGAGTATGTCAGCACACTTAAGGCTGGCATGGA
GAGTGGCTGGATAGATGTATATGAGAATGAGAACAAGAGAAGCGGAGCGTATTCATGGGGCGCTTACGGCACTCATCCGT
ATGTGCTTTTGAACTATGCCGACAATCTGGACAGTGTGTTTACGCTGGCTCATGAGATGGGACATGCGATGCATACATAC
TATTCAAATGAGCATCAGAGTATCACCTACGCAGGATACCTGATTTTTGTGGCAGAGGTTGCATCCACCTGCAATGAGTC
GCTTCTAATGCACTATATGCTTGAGCATTGTGAGGATGAGAATGAGAGAAAATATCTCATGACACATTTTCTGGACGGCT
TCAGGACGACACTTTTCAGGCAGGCGCAGTTTGCTGAGTTTGAGCATATAGCTCACCGGAAAATGCAAAAGGGCGAGCCG
GTTACCAAGGATGTGCTAAATGAACTGTGGTATGAGCTGAATGTGCAGTACTACGGACCAGATATGCGCGTGGATGATGA
GATATCATATGAGTGGATGCGCATACCGCATTTTTACACACCGTACTATGTATATCAGTACTCGACGGGCTATTCGGCAG
CAGTTGCTTTTTCAAAAAAGATACTTGAGGAGGGAAAGCCTGCTGTGGATAAGTATATAGGAAATTTCCTGTGCGGTGGA
TGCTCGAAGAATCCAATCGAGCTGCTAAAGAGTGCCGGTGTCGATATGAGCACACCAAAGCCTGTGGATGATGCACTCAA
TGTATTTGAGGATTATCTGAAGCAGTTTGAGACAGCAACTAAGTAA

Upstream 100 bases:

>100_bases
AATTGTTATAATTCACATATATCCCACACGTCTATATGCATTTTGCAGAGCAGATGTGTGGGATTCTAAATAAAAAGAGT
AAGATAGAAGGTAACACAAA

Downstream 100 bases:

>100_bases
GGAGAAACATTTTTATGGAAAGAATTAAAAGCTTTACAATCAATCATAATATTCTTAAACCTGGATTTTATATTTCAAGA
AAAGACGGAGAAATCGTTAC

Product: peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 601; Mature: 600

Protein sequence:

>601_residues
MSEKRLQKRDEISDEYKWKLEDMYETDELWEAECEKASQIAEKLSGFKGHLADSAATLLDFFKKQDELSYYLERIVVYAN
ERSHQDTAVSKYQAYVSKAETLTVQASGALAFASPEILQIDDKRLESFYSESNELMHYKRAIDEIMRQKEHTLSAAEENI
LAQCGEMAAAPENIFSMFNNADIKFPYITDVEGNKIRITHGNFIDFLSSKDRSLRKQVFRGVYDSYKKWSNTVSMMYISK
LKNDTFYARVRKYDSARTMYLSGGDIPESVYDNLIETVHAHLPALHRYMALRKKLLGVEHLHMYDLFAPIVDNVQTTYTY
DEAKKLVAKALEPMGDEYVSTLKAGMESGWIDVYENENKRSGAYSWGAYGTHPYVLLNYADNLDSVFTLAHEMGHAMHTY
YSNEHQSITYAGYLIFVAEVASTCNESLLMHYMLEHCEDENERKYLMTHFLDGFRTTLFRQAQFAEFEHIAHRKMQKGEP
VTKDVLNELWYELNVQYYGPDMRVDDEISYEWMRIPHFYTPYYVYQYSTGYSAAVAFSKKILEEGKPAVDKYIGNFLCGG
CSKNPIELLKSAGVDMSTPKPVDDALNVFEDYLKQFETATK

Sequences:

>Translated_601_residues
MSEKRLQKRDEISDEYKWKLEDMYETDELWEAECEKASQIAEKLSGFKGHLADSAATLLDFFKKQDELSYYLERIVVYAN
ERSHQDTAVSKYQAYVSKAETLTVQASGALAFASPEILQIDDKRLESFYSESNELMHYKRAIDEIMRQKEHTLSAAEENI
LAQCGEMAAAPENIFSMFNNADIKFPYITDVEGNKIRITHGNFIDFLSSKDRSLRKQVFRGVYDSYKKWSNTVSMMYISK
LKNDTFYARVRKYDSARTMYLSGGDIPESVYDNLIETVHAHLPALHRYMALRKKLLGVEHLHMYDLFAPIVDNVQTTYTY
DEAKKLVAKALEPMGDEYVSTLKAGMESGWIDVYENENKRSGAYSWGAYGTHPYVLLNYADNLDSVFTLAHEMGHAMHTY
YSNEHQSITYAGYLIFVAEVASTCNESLLMHYMLEHCEDENERKYLMTHFLDGFRTTLFRQAQFAEFEHIAHRKMQKGEP
VTKDVLNELWYELNVQYYGPDMRVDDEISYEWMRIPHFYTPYYVYQYSTGYSAAVAFSKKILEEGKPAVDKYIGNFLCGG
CSKNPIELLKSAGVDMSTPKPVDDALNVFEDYLKQFETATK
>Mature_600_residues
SEKRLQKRDEISDEYKWKLEDMYETDELWEAECEKASQIAEKLSGFKGHLADSAATLLDFFKKQDELSYYLERIVVYANE
RSHQDTAVSKYQAYVSKAETLTVQASGALAFASPEILQIDDKRLESFYSESNELMHYKRAIDEIMRQKEHTLSAAEENIL
AQCGEMAAAPENIFSMFNNADIKFPYITDVEGNKIRITHGNFIDFLSSKDRSLRKQVFRGVYDSYKKWSNTVSMMYISKL
KNDTFYARVRKYDSARTMYLSGGDIPESVYDNLIETVHAHLPALHRYMALRKKLLGVEHLHMYDLFAPIVDNVQTTYTYD
EAKKLVAKALEPMGDEYVSTLKAGMESGWIDVYENENKRSGAYSWGAYGTHPYVLLNYADNLDSVFTLAHEMGHAMHTYY
SNEHQSITYAGYLIFVAEVASTCNESLLMHYMLEHCEDENERKYLMTHFLDGFRTTLFRQAQFAEFEHIAHRKMQKGEPV
TKDVLNELWYELNVQYYGPDMRVDDEISYEWMRIPHFYTPYYVYQYSTGYSAAVAFSKKILEEGKPAVDKYIGNFLCGGC
SKNPIELLKSAGVDMSTPKPVDDALNVFEDYLKQFETATK

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 69561; Mature: 69430

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS00142 ZINC_PROTEASE ; PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKRLQKRDEISDEYKWKLEDMYETDELWEAECEKASQIAEKLSGFKGHLADSAATLLD
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
FFKKQDELSYYLERIVVYANERSHQDTAVSKYQAYVSKAETLTVQASGALAFASPEILQI
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEEEECCEEEECCCCCEEC
DDKRLESFYSESNELMHYKRAIDEIMRQKEHTLSAAEENILAQCGEMAAAPENIFSMFNN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
ADIKFPYITDVEGNKIRITHGNFIDFLSSKDRSLRKQVFRGVYDSYKKWSNTVSMMYISK
CCEECCEEECCCCCEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKNDTFYARVRKYDSARTMYLSGGDIPESVYDNLIETVHAHLPALHRYMALRKKLLGVEH
HCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
LHMYDLFAPIVDNVQTTYTYDEAKKLVAKALEPMGDEYVSTLKAGMESGWIDVYENENKR
HHHHHHHHHHHCCCHHEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCC
SGAYSWGAYGTHPYVLLNYADNLDSVFTLAHEMGHAMHTYYSNEHQSITYAGYLIFVAEV
CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHH
ASTCNESLLMHYMLEHCEDENERKYLMTHFLDGFRTTLFRQAQFAEFEHIAHRKMQKGEP
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VTKDVLNELWYELNVQYYGPDMRVDDEISYEWMRIPHFYTPYYVYQYSTGYSAAVAFSKK
HHHHHHHHHHHHCCEEEECCCCCCCCCCCCCEEECCCEECCEEEEEECCCCHHHHHHHHH
ILEEGKPAVDKYIGNFLCGGCSKNPIELLKSAGVDMSTPKPVDDALNVFEDYLKQFETAT
HHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
K
C
>Mature Secondary Structure 
SEKRLQKRDEISDEYKWKLEDMYETDELWEAECEKASQIAEKLSGFKGHLADSAATLLD
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
FFKKQDELSYYLERIVVYANERSHQDTAVSKYQAYVSKAETLTVQASGALAFASPEILQI
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEEEECCEEEECCCCCEEC
DDKRLESFYSESNELMHYKRAIDEIMRQKEHTLSAAEENILAQCGEMAAAPENIFSMFNN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
ADIKFPYITDVEGNKIRITHGNFIDFLSSKDRSLRKQVFRGVYDSYKKWSNTVSMMYISK
CCEECCEEECCCCCEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKNDTFYARVRKYDSARTMYLSGGDIPESVYDNLIETVHAHLPALHRYMALRKKLLGVEH
HCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
LHMYDLFAPIVDNVQTTYTYDEAKKLVAKALEPMGDEYVSTLKAGMESGWIDVYENENKR
HHHHHHHHHHHCCCHHEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCC
SGAYSWGAYGTHPYVLLNYADNLDSVFTLAHEMGHAMHTYYSNEHQSITYAGYLIFVAEV
CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHH
ASTCNESLLMHYMLEHCEDENERKYLMTHFLDGFRTTLFRQAQFAEFEHIAHRKMQKGEP
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VTKDVLNELWYELNVQYYGPDMRVDDEISYEWMRIPHFYTPYYVYQYSTGYSAAVAFSKK
HHHHHHHHHHHHCCEEEECCCCCCCCCCCCCEEECCCEECCEEEEEECCCCHHHHHHHHH
ILEEGKPAVDKYIGNFLCGGCSKNPIELLKSAGVDMSTPKPVDDALNVFEDYLKQFETAT
HHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]