| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is trxB [H]
Identifier: 238924936
GI number: 238924936
Start: 2458553
End: 2459848
Strand: Reverse
Name: trxB [H]
Synonym: EUBREC_2587
Alternate gene names: 238924936
Gene position: 2459848-2458553 (Counterclockwise)
Preceding gene: 238924937
Following gene: 238924935
Centisome position: 71.31
GC content: 47.07
Gene sequence:
>1296_bases ATGGAATTTTACGATATTGTGATAGTAGGAGGCGGCCCGGCAGGTCTTGCGGCAGCAGCTTCCGCTAAGAAAAATAAAAT AGATAAAATACTTATACTGGAAAGAGACTGCGAGCTTGGCGGCATATTAAACCAGTGTATACACAATGGCTTTGGCCTGC ACACCTTTAAGGAGGAACTCACAGGTCCTGAATATGCCGGCAGATTTATCAAAGAGGTCAAAGAGCTTGGCATAGAGTAC AGACTGAATACGATGGTCATGGATATCTCAACCGGTGACGAGTCCGAAAATGGGTCAAACGATAAAATAGTCACGGCTAT GAACCGTACAGACGGACTTTTCCATATCGCTGCAAAGACAGTAATACTTGCGATGGGCTGCAGGGAGAGAGCAAGAGGTG CCCTAAACATACCAGGCTACAGACCGGCAGGAATTTTCTCGGCGGGTACAGCTCAGAGACTGGTGAATATAGAGGGATAC ATGCCGGGACGAAAGGTAGTAATACTTGGCTCAGGAGATATCGGTCTTATCATGGCAAGAAGAATGACCTTGGAGGGTGC CAAGGTGCAGGTGGTTGCAGAACTCATGCCGTATTCAGGAGGCTTGAAGCGTAATATTGTGCAGTGCCTTGATGATTTTA ATATCCCGCTTAAGCTTAGCCACACAGTGGTTGATATAAAGGGCAGGGAGCGTGTGGAGGGCATCACTCTCGCTCAGGTT GACGAGCATAACAAGCCTATTGAGGGAACAGAGGAGTTTTACGAGTGCGATACGCTTTTACTCTCATGCGGACTCATTCC GGAAAATGAGATTTCAAAAACAGCAGGTGTAGAGCTCAATCCTGTAACAAGCGGACCTGTTGTAAACGAAAGCCTTGAGA CCAATGTGCCGGGTGTATTTGCCTGTGGAAATGTGCTTCATGTGCACGACCTCGTGGATTATGTGTCAGAGGAAGCAACA GCAGCAGGCCGCCATGCCGCAGAGTATGTGAAAAACGGCGGTGATAAGAGTTGCGATGGCAAAGAAATATCGATAACTGC TACAGGCGGAGTCAGATATACTGTCCCAAGCACTATAAATACTGCACAGATGGATGATACTGTGACGGTAAGATTTCGAG TGGGAGCTGTGTATAAGAATTGTTATATTGCAGTATATCTGGATGATAAACAATTACAGCACCGCAAGCGCCCTGTAATG GCACCGGGTGAGATGGAGCAGGTAGTGCTGCAGAAGAAGCAGCTCATCGAAACAGACAATCCCTGCACAATTACGATAAA GATTGAGGAGGCATAG
Upstream 100 bases:
>100_bases TTGGAATGAGCAAGAATCGCGGATAGTCTGTCTTACTTCAAAGAGACAGGTAACGAAAGATTGATATTGGGTTAATATCA GATTAACATAGGGGGACAAT
Downstream 100 bases:
>100_bases TATCATGGAAGAGAGAAATTTGACATGTATAGGCTGCCCTCTGGGCTGTGCCCTTAAGGTGACAATAGACGGAGAAAATG TCACAGTAACCGGAAATACC
Product: sarcosine oxidase alpha subunit
Products: NA
Alternate protein names: TRXR [H]
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MEFYDIVIVGGGPAGLAAAASAKKNKIDKILILERDCELGGILNQCIHNGFGLHTFKEELTGPEYAGRFIKEVKELGIEY RLNTMVMDISTGDESENGSNDKIVTAMNRTDGLFHIAAKTVILAMGCRERARGALNIPGYRPAGIFSAGTAQRLVNIEGY MPGRKVVILGSGDIGLIMARRMTLEGAKVQVVAELMPYSGGLKRNIVQCLDDFNIPLKLSHTVVDIKGRERVEGITLAQV DEHNKPIEGTEEFYECDTLLLSCGLIPENEISKTAGVELNPVTSGPVVNESLETNVPGVFACGNVLHVHDLVDYVSEEAT AAGRHAAEYVKNGGDKSCDGKEISITATGGVRYTVPSTINTAQMDDTVTVRFRVGAVYKNCYIAVYLDDKQLQHRKRPVM APGEMEQVVLQKKQLIETDNPCTITIKIEEA
Sequences:
>Translated_431_residues MEFYDIVIVGGGPAGLAAAASAKKNKIDKILILERDCELGGILNQCIHNGFGLHTFKEELTGPEYAGRFIKEVKELGIEY RLNTMVMDISTGDESENGSNDKIVTAMNRTDGLFHIAAKTVILAMGCRERARGALNIPGYRPAGIFSAGTAQRLVNIEGY MPGRKVVILGSGDIGLIMARRMTLEGAKVQVVAELMPYSGGLKRNIVQCLDDFNIPLKLSHTVVDIKGRERVEGITLAQV DEHNKPIEGTEEFYECDTLLLSCGLIPENEISKTAGVELNPVTSGPVVNESLETNVPGVFACGNVLHVHDLVDYVSEEAT AAGRHAAEYVKNGGDKSCDGKEISITATGGVRYTVPSTINTAQMDDTVTVRFRVGAVYKNCYIAVYLDDKQLQHRKRPVM APGEMEQVVLQKKQLIETDNPCTITIKIEEA >Mature_431_residues MEFYDIVIVGGGPAGLAAAASAKKNKIDKILILERDCELGGILNQCIHNGFGLHTFKEELTGPEYAGRFIKEVKELGIEY RLNTMVMDISTGDESENGSNDKIVTAMNRTDGLFHIAAKTVILAMGCRERARGALNIPGYRPAGIFSAGTAQRLVNIEGY MPGRKVVILGSGDIGLIMARRMTLEGAKVQVVAELMPYSGGLKRNIVQCLDDFNIPLKLSHTVVDIKGRERVEGITLAQV DEHNKPIEGTEEFYECDTLLLSCGLIPENEISKTAGVELNPVTSGPVVNESLETNVPGVFACGNVLHVHDLVDYVSEEAT AAGRHAAEYVKNGGDKSCDGKEISITATGGVRYTVPSTINTAQMDDTVTVRFRVGAVYKNCYIAVYLDDKQLQHRKRPVM APGEMEQVVLQKKQLIETDNPCTITIKIEEA
Specific function: NITROGEN METABOLISM, GLUTAMATE BIOSYNTHESIS. THE CATALYZED REACTION BRINGS TOGETHER THE NITROGEN AND CARBON METABOLISM. [C]
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: 620 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR008255 - InterPro: IPR001327 - InterPro: IPR000103 - InterPro: IPR005982 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: =1.8.1.9 [H]
Molecular weight: Translated: 46859; Mature: 46859
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFYDIVIVGGGPAGLAAAASAKKNKIDKILILERDCELGGILNQCIHNGFGLHTFKEEL CCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHH TGPEYAGRFIKEVKELGIEYRLNTMVMDISTGDESENGSNDKIVTAMNRTDGLFHIAAKT CCHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCEEEHHHHH VILAMGCRERARGALNIPGYRPAGIFSAGTAQRLVNIEGYMPGRKVVILGSGDIGLIMAR HHHHHCCHHHCCCCCCCCCCCCCCCCCCCCHHHEEEEECCCCCCEEEEEECCCEEEEEEE RMTLEGAKVQVVAELMPYSGGLKRNIVQCLDDFNIPLKLSHTVVDIKGRERVEGITLAQV EEECCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCHHCCEEEEEE DEHNKPIEGTEEFYECDTLLLSCGLIPENEISKTAGVELNPVTSGPVVNESLETNVPGVF CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHCCCEEECCCCCCCCCCCHHCCCCEEE ACGNVLHVHDLVDYVSEEATAAGRHAAEYVKNGGDKSCDGKEISITATGGVRYTVPSTIN ECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEECCCCCC TAQMDDTVTVRFRVGAVYKNCYIAVYLDDKQLQHRKRPVMAPGEMEQVVLQKKQLIETDN CCCCCCEEEEEEEEEEEEECEEEEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCC PCTITIKIEEA CEEEEEEEECC >Mature Secondary Structure MEFYDIVIVGGGPAGLAAAASAKKNKIDKILILERDCELGGILNQCIHNGFGLHTFKEEL CCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHH TGPEYAGRFIKEVKELGIEYRLNTMVMDISTGDESENGSNDKIVTAMNRTDGLFHIAAKT CCHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCEEEHHHHH VILAMGCRERARGALNIPGYRPAGIFSAGTAQRLVNIEGYMPGRKVVILGSGDIGLIMAR HHHHHCCHHHCCCCCCCCCCCCCCCCCCCCHHHEEEEECCCCCCEEEEEECCCEEEEEEE RMTLEGAKVQVVAELMPYSGGLKRNIVQCLDDFNIPLKLSHTVVDIKGRERVEGITLAQV EEECCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCHHCCEEEEEE DEHNKPIEGTEEFYECDTLLLSCGLIPENEISKTAGVELNPVTSGPVVNESLETNVPGVF CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHCCCEEECCCCCCCCCCCHHCCCCEEE ACGNVLHVHDLVDYVSEEATAAGRHAAEYVKNGGDKSCDGKEISITATGGVRYTVPSTIN ECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEECCCCCC TAQMDDTVTVRFRVGAVYKNCYIAVYLDDKQLQHRKRPVMAPGEMEQVVLQKKQLIETDN CCCCCCEEEEEEEEEEEEECEEEEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCC PCTITIKIEEA CEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA