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The map label for this gene is 238924909

Identifier: 238924909

GI number: 238924909

Start: 2433153

End: 2434637

Strand: Reverse

Name: 238924909

Synonym: EUBREC_2560

Alternate gene names: NA

Gene position: 2434637-2433153 (Counterclockwise)

Preceding gene: 238924911

Following gene: 238924908

Centisome position: 70.58

GC content: 44.51

Gene sequence:

>1485_bases
ATGAACAATATTCCAAAAATGAAAATCGGTATAGTTGCGGTAAGCCGTGACTGTTTTCCGGAAAGTCTGTCAGTAAACAG
AAGAAAAGCACTTGTCGATGCATACGCTGCAAAATATGATGCAGCAGACATATACGAGTGTCCTGTATGTATCGTGGAGA
GCGAAATACATATGGTACAGGCACTTGAGGACATAAAGGCAGCAGGCTGCAATGCACTTTGCGTTTACCTTGGAAACTTT
GGACCGGAGATTTCAGAGACTCTTCTTGCAAAGCACTTTGACGGACCAAAGATGTTTGTTGCAGCAGCAGAGGAGACACA
GGAGAACTTAATTCAGGGACGTGGAGATGCATACTGTGGTATGTTAAACGCAAGCTACAATCTGGCACTCAGAAATATAG
GAGCGTATATTCCGGAGTATCCTGTGGGCGATGCAGATGACTGCGCAGATATGATACATGAATTCCTGCCAATAGCAAGG
GCTATATACGGACTTAATAATCTTAAGATTATTTCATTCGGACCAAGACCACTCAATTTCCTTGCATGCAATGCACCAAT
CAAGCAGCTCTACAACGTGGGTGTTGAGATTGAGGAAAATTCAGAGCTTGATTTGTTTGAGGCATTTAACAAGCATGCTG
GTGATGAGAGAATACCGGATGTGGTAAAGGATATGGAAAAGGAGCTTGGCGAGGGCAACAAAAAGCCTGAGATTCTTGAG
AAGCTTGCACAGTATGAACTCACACTTTTAGACTGGGTTGATGAGCATAAGGGCTACAGAAAGTATGTGGCAATCGCAGG
AAAATGCTGGCCTGCCTTCCAGACACAGTTTGGATTTGTACCATGCTATGTAAACAGCCGTCTTACAGGAAGAGGTATCC
CGGTTTCATGCGAGGTTGACATCTATGGAGTGCTCAGTGAGTTTATCGGAACCTGCGTCAGCGAGGATGCAGTAACACTT
CTCGACATCAACAACTCAGTGCCGAAGGATATGTACAAGGAGTCAATCGAGGGCAGATTTGACTACAAGCATACAGATAC
ATTTATGGGCTTCCATTGTGGAAACACCTGTTCAAGCAAGGTTTGCAACCCACAGATGAAGTATCAGATGATTATGGCAA
GAAGCCTTCCTATAGAGGTGACAAACGGAACTCTCGAGGGAGATATAGTGCCGGGAGATATTACATTTTACCGTCTCCAG
TCTACAGCAGACTGTAAGATTCGCGCTTATGTGGCTCAGGGTGAGGTGCTTCCTGTTGCAACACGTTCATTCGGCAGTAT
CGGAGTGTTTGCGATAAAGGAGATGGGACGTTTCTACCGTCATGTGCTTATTGAGAAGAATTATCCTCATCACGGAGCTG
TAGCTTTCGGTCATTACGGAAAAGCCCTTTTTGAGGTATTTAAATATATTGGCGTGCCAGTTGAGGATATTAACTACAAC
CAGCCGGCATCACTGCCATACAAGACAGAAAATCCTTTCTGTTAG

Upstream 100 bases:

>100_bases
CTAAATTATAGGTATCAATTAAGTTAAACCGGATATATACTTAGCACATAAGAACAATTAATCTGTCCGATGGGGCATAT
GAGAGAAGGAGATTTACACT

Downstream 100 bases:

>100_bases
TGGGGTCTGAATAGTTACGTTATCTGATGTAAACATATTACGTGAATGGAGAATAGATATGCTATATATAGGTGTGGATT
TAGGCACAAGTGCAGTAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: L-Fucose Isomerase Related Protein; L-Fucose Isomerase; L-Fucose Isomerase Domain-Containing Protein; L-Fucose Isomerase C-Terminal Domain Protein; L-Fucose Isomerase-Like; L-Fucose Isomerase C-Terminal; L-Fucose Isomerase-Like Protein Protein

Number of amino acids: Translated: 494; Mature: 494

Protein sequence:

>494_residues
MNNIPKMKIGIVAVSRDCFPESLSVNRRKALVDAYAAKYDAADIYECPVCIVESEIHMVQALEDIKAAGCNALCVYLGNF
GPEISETLLAKHFDGPKMFVAAAEETQENLIQGRGDAYCGMLNASYNLALRNIGAYIPEYPVGDADDCADMIHEFLPIAR
AIYGLNNLKIISFGPRPLNFLACNAPIKQLYNVGVEIEENSELDLFEAFNKHAGDERIPDVVKDMEKELGEGNKKPEILE
KLAQYELTLLDWVDEHKGYRKYVAIAGKCWPAFQTQFGFVPCYVNSRLTGRGIPVSCEVDIYGVLSEFIGTCVSEDAVTL
LDINNSVPKDMYKESIEGRFDYKHTDTFMGFHCGNTCSSKVCNPQMKYQMIMARSLPIEVTNGTLEGDIVPGDITFYRLQ
STADCKIRAYVAQGEVLPVATRSFGSIGVFAIKEMGRFYRHVLIEKNYPHHGAVAFGHYGKALFEVFKYIGVPVEDINYN
QPASLPYKTENPFC

Sequences:

>Translated_494_residues
MNNIPKMKIGIVAVSRDCFPESLSVNRRKALVDAYAAKYDAADIYECPVCIVESEIHMVQALEDIKAAGCNALCVYLGNF
GPEISETLLAKHFDGPKMFVAAAEETQENLIQGRGDAYCGMLNASYNLALRNIGAYIPEYPVGDADDCADMIHEFLPIAR
AIYGLNNLKIISFGPRPLNFLACNAPIKQLYNVGVEIEENSELDLFEAFNKHAGDERIPDVVKDMEKELGEGNKKPEILE
KLAQYELTLLDWVDEHKGYRKYVAIAGKCWPAFQTQFGFVPCYVNSRLTGRGIPVSCEVDIYGVLSEFIGTCVSEDAVTL
LDINNSVPKDMYKESIEGRFDYKHTDTFMGFHCGNTCSSKVCNPQMKYQMIMARSLPIEVTNGTLEGDIVPGDITFYRLQ
STADCKIRAYVAQGEVLPVATRSFGSIGVFAIKEMGRFYRHVLIEKNYPHHGAVAFGHYGKALFEVFKYIGVPVEDINYN
QPASLPYKTENPFC
>Mature_494_residues
MNNIPKMKIGIVAVSRDCFPESLSVNRRKALVDAYAAKYDAADIYECPVCIVESEIHMVQALEDIKAAGCNALCVYLGNF
GPEISETLLAKHFDGPKMFVAAAEETQENLIQGRGDAYCGMLNASYNLALRNIGAYIPEYPVGDADDCADMIHEFLPIAR
AIYGLNNLKIISFGPRPLNFLACNAPIKQLYNVGVEIEENSELDLFEAFNKHAGDERIPDVVKDMEKELGEGNKKPEILE
KLAQYELTLLDWVDEHKGYRKYVAIAGKCWPAFQTQFGFVPCYVNSRLTGRGIPVSCEVDIYGVLSEFIGTCVSEDAVTL
LDINNSVPKDMYKESIEGRFDYKHTDTFMGFHCGNTCSSKVCNPQMKYQMIMARSLPIEVTNGTLEGDIVPGDITFYRLQ
STADCKIRAYVAQGEVLPVATRSFGSIGVFAIKEMGRFYRHVLIEKNYPHHGAVAFGHYGKALFEVFKYIGVPVEDINYN
QPASLPYKTENPFC

Specific function: Unknown

COG id: COG2407

COG function: function code G; L-fucose isomerase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55078; Mature: 55078

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNIPKMKIGIVAVSRDCFPESLSVNRRKALVDAYAAKYDAADIYECPVCIVESEIHMVQ
CCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCEEEEEHHHHHHH
ALEDIKAAGCNALCVYLGNFGPEISETLLAKHFDGPKMFVAAAEETQENLIQGRGDAYCG
HHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCCEEE
MLNASYNLALRNIGAYIPEYPVGDADDCADMIHEFLPIARAIYGLNNLKIISFGPRPLNF
EECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEE
LACNAPIKQLYNVGVEIEENSELDLFEAFNKHAGDERIPDVVKDMEKELGEGNKKPEILE
EECCCHHHHHHHCCCEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHH
KLAQYELTLLDWVDEHKGYRKYVAIAGKCWPAFQTQFGFVPCYVNSRLTGRGIPVSCEVD
HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHCCCCEEEEEECCEECCCCCCEEEEEH
IYGVLSEFIGTCVSEDAVTLLDINNSVPKDMYKESIEGRFDYKHTDTFMGFHCGNTCSSK
HHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCCCCCEECCCEEEEECCCCCHHH
VCNPQMKYQMIMARSLPIEVTNGTLEGDIVPGDITFYRLQSTADCKIRAYVAQGEVLPVA
CCCCHHHHHHHHHHCCCEEEECCEEECCEECCCEEEEEECCCCCCEEEEEEECCCEEEEE
TRSFGSIGVFAIKEMGRFYRHVLIEKNYPHHGAVAFGHYGKALFEVFKYIGVPVEDINYN
CCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCEEECHHHHHHHHHHHHHCCCHHHCCCC
QPASLPYKTENPFC
CCCCCCCCCCCCCC
>Mature Secondary Structure
MNNIPKMKIGIVAVSRDCFPESLSVNRRKALVDAYAAKYDAADIYECPVCIVESEIHMVQ
CCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCEEEEEHHHHHHH
ALEDIKAAGCNALCVYLGNFGPEISETLLAKHFDGPKMFVAAAEETQENLIQGRGDAYCG
HHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCCEEE
MLNASYNLALRNIGAYIPEYPVGDADDCADMIHEFLPIARAIYGLNNLKIISFGPRPLNF
EECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEE
LACNAPIKQLYNVGVEIEENSELDLFEAFNKHAGDERIPDVVKDMEKELGEGNKKPEILE
EECCCHHHHHHHCCCEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHH
KLAQYELTLLDWVDEHKGYRKYVAIAGKCWPAFQTQFGFVPCYVNSRLTGRGIPVSCEVD
HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHCCCCEEEEEECCEECCCCCCEEEEEH
IYGVLSEFIGTCVSEDAVTLLDINNSVPKDMYKESIEGRFDYKHTDTFMGFHCGNTCSSK
HHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCCCCCEECCCEEEEECCCCCHHH
VCNPQMKYQMIMARSLPIEVTNGTLEGDIVPGDITFYRLQSTADCKIRAYVAQGEVLPVA
CCCCHHHHHHHHHHCCCEEEECCEEECCEECCCEEEEEECCCCCCEEEEEEECCCEEEEE
TRSFGSIGVFAIKEMGRFYRHVLIEKNYPHHGAVAFGHYGKALFEVFKYIGVPVEDINYN
CCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCEEECHHHHHHHHHHHHHCCCHHHCCCC
QPASLPYKTENPFC
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA