| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
Click here to switch to the map view.
The map label for this gene is bcsP31 [H]
Identifier: 238924213
GI number: 238924213
Start: 1733445
End: 1734371
Strand: Direct
Name: bcsP31 [H]
Synonym: EUBREC_1851
Alternate gene names: 238924213
Gene position: 1733445-1734371 (Clockwise)
Preceding gene: 238924204
Following gene: 238924214
Centisome position: 50.25
GC content: 45.74
Gene sequence:
>927_bases ATGAAGAAAAAAATCAGTATCATGCTTTGCATAGTACTCTTCGCCCTGACAGGCTGCACCAACTCCGGCCGCACAATACG CTTCGGAACAGCCGACATCGGTGGAATGTACTATTCATTTGCAAATACATTTACGGAGCTTGCCAATGAACAGGGCTATG ACTTTACCTGCAAGGTTCGTACCACAGCAGGCTCTAATGCCAATATAAGGCTTTTATCCGATGACTATATAGAGATAGGC ATCGCACAGGCAGACCTGATAGCCGATGCCTACAAGACAAATGAAGATTTAAGGGCTATAGCAGGGCTTTACACCGAGAC CTGTCAGCTTGTGGTCCGCGCTGATTCAAACATACAGACTCTTGACGACCTGTCAGGACACACTGTAAGCATCGGAGCAG AGGAATCCGGCACCGAGCGAAATGCCACACAGATTCTTGAGTTCGCCGGTATGCCATCATCCCTTGTTGCCACCAAAAAC CTGGACTATATCGAGGCCACAAAAGAGCTAAAAGCCGGTGATATAGATGCCTTCTTCTGCACTGCCGGACTCACCACCAC TGTCATAGATGAGCTCTCAAAGGAATGCGACATAAGGCTTATCCCGCTGACTGATACTGTGATAAACAAGATGCTTGAAA GCAGCTCTGCCTACACAAGCGAGGTCATACCTGCCGGCACATACACAGGCCAGACCACAGATATAAGCACAATAGGTGTA AAATCTGTGCTTATCACAAAGTCTGATGTATCTGACGATACAATTGAGCAGCTTACATCGCTCCTGTTTGAAAAAGAAAA TGAGCTCTCCTACTCCAACTCTCTTAAGCTTGAGCTGACATATAACTTTGCAACAGACGGTATACCTATTCCATTTCACG ATGGAGCAAAAAGGTATTATGAAGTCTGTGGATATAGTACAAATTAA
Upstream 100 bases:
>100_bases TGGAATTTAAGAAAAATTTAAATTAAATCTTTTCATATTAGAAAATTTTTTGTAAAATACTCATAGCAATTATGAAAAAG TGAAAGGACAAAGACAAAAC
Downstream 100 bases:
>100_bases TTCGCGAATTAATTTTTAGTCCAATATATAATATTCAAAATATAAGAAGAAAATAACAAGAATATAATCAATAAAAATTG AAAGGTAACACATGAAAATA
Product: TRAP transporter solute receptor, TAXI family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MKKKISIMLCIVLFALTGCTNSGRTIRFGTADIGGMYYSFANTFTELANEQGYDFTCKVRTTAGSNANIRLLSDDYIEIG IAQADLIADAYKTNEDLRAIAGLYTETCQLVVRADSNIQTLDDLSGHTVSIGAEESGTERNATQILEFAGMPSSLVATKN LDYIEATKELKAGDIDAFFCTAGLTTTVIDELSKECDIRLIPLTDTVINKMLESSSAYTSEVIPAGTYTGQTTDISTIGV KSVLITKSDVSDDTIEQLTSLLFEKENELSYSNSLKLELTYNFATDGIPIPFHDGAKRYYEVCGYSTN
Sequences:
>Translated_308_residues MKKKISIMLCIVLFALTGCTNSGRTIRFGTADIGGMYYSFANTFTELANEQGYDFTCKVRTTAGSNANIRLLSDDYIEIG IAQADLIADAYKTNEDLRAIAGLYTETCQLVVRADSNIQTLDDLSGHTVSIGAEESGTERNATQILEFAGMPSSLVATKN LDYIEATKELKAGDIDAFFCTAGLTTTVIDELSKECDIRLIPLTDTVINKMLESSSAYTSEVIPAGTYTGQTTDISTIGV KSVLITKSDVSDDTIEQLTSLLFEKENELSYSNSLKLELTYNFATDGIPIPFHDGAKRYYEVCGYSTN >Mature_308_residues MKKKISIMLCIVLFALTGCTNSGRTIRFGTADIGGMYYSFANTFTELANEQGYDFTCKVRTTAGSNANIRLLSDDYIEIG IAQADLIADAYKTNEDLRAIAGLYTETCQLVVRADSNIQTLDDLSGHTVSIGAEESGTERNATQILEFAGMPSSLVATKN LDYIEATKELKAGDIDAFFCTAGLTTTVIDELSKECDIRLIPLTDTVINKMLESSSAYTSEVIPAGTYTGQTTDISTIGV KSVLITKSDVSDDTIEQLTSLLFEKENELSYSNSLKLELTYNFATDGIPIPFHDGAKRYYEVCGYSTN
Specific function: Unknown
COG id: COG2358
COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 - InterPro: IPR011852 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 33543; Mature: 33543
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKISIMLCIVLFALTGCTNSGRTIRFGTADIGGMYYSFANTFTELANEQGYDFTCKVR CCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE TTAGSNANIRLLSDDYIEIGIAQADLIADAYKTNEDLRAIAGLYTETCQLVVRADSNIQT EECCCCCEEEEEECCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEEECCCCCCH LDDLSGHTVSIGAEESGTERNATQILEFAGMPSSLVATKNLDYIEATKELKAGDIDAFFC HHCCCCCEEEECCCCCCCCCHHHHHHHHCCCCHHHHEECCCCHHHHHHHCCCCCCCEEEE TAGLTTTVIDELSKECDIRLIPLTDTVINKMLESSSAYTSEVIPAGTYTGQTTDISTIGV ECCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEHHCE KSVLITKSDVSDDTIEQLTSLLFEKENELSYSNSLKLELTYNFATDGIPIPFHDGAKRYY EEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHH EVCGYSTN HHCCCCCC >Mature Secondary Structure MKKKISIMLCIVLFALTGCTNSGRTIRFGTADIGGMYYSFANTFTELANEQGYDFTCKVR CCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE TTAGSNANIRLLSDDYIEIGIAQADLIADAYKTNEDLRAIAGLYTETCQLVVRADSNIQT EECCCCCEEEEEECCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEEECCCCCCH LDDLSGHTVSIGAEESGTERNATQILEFAGMPSSLVATKNLDYIEATKELKAGDIDAFFC HHCCCCCEEEECCCCCCCCCHHHHHHHHCCCCHHHHEECCCCHHHHHHHCCCCCCCEEEE TAGLTTTVIDELSKECDIRLIPLTDTVINKMLESSSAYTSEVIPAGTYTGQTTDISTIGV ECCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEHHCE KSVLITKSDVSDDTIEQLTSLLFEKENELSYSNSLKLELTYNFATDGIPIPFHDGAKRYY EEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHH EVCGYSTN HHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3133283 [H]