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The map label for this gene is ruvB [H]

Identifier: 238924018

GI number: 238924018

Start: 1541597

End: 1541836

Strand: Direct

Name: ruvB [H]

Synonym: EUBREC_1656

Alternate gene names: 238924018

Gene position: 1541597-1541836 (Clockwise)

Preceding gene: 238924017

Following gene: 238924019

Centisome position: 44.69

GC content: 41.25

Gene sequence:

>240_bases
GTGAAAAGAGTAATTTCCACACAATTGCAGGAAGAGGACATAAAGATAGAGAAATCCCTGCGTCCTATGTATTTTGATGA
CTATATCGGTCAGCAGAAGATAAAGGACAATTTAAAAATATATATTGAAGCCGCAAAATCAAGGGGCGAGGCGCTCGATC
ATGTGCTGTTTTATGGCCCCCGGGACTTGGAAAGACAACACTTGCAGGAATCATTGCAAATGAGATGGGCACAAAGATAA

Upstream 100 bases:

>100_bases
CACAGAGGATATGGATGTAGAGGATGTGCTGAAGCTTGCACTCAAAAATATGGGCTGATTGGACAAGCTGTAAGCTTAAA
ACAGAAACGGGGAACAAAAC

Downstream 100 bases:

>100_bases
AGGTGACCTCCGGTCCTGCAATAGGTAAGCCGGGAGAGATGGCAGCCATACTCAACGGACTTTCTGAGGGAGATATACTG
TTTGTCGATGAGATTCACAG

Product: Holliday junction DNA helicase B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MKRVISTQLQEEDIKIEKSLRPMYFDDYIGQQKIKDNLKIYIEAAKSRGEALDHVLFYGPRDLERQHLQESLQMRWAQR

Sequences:

>Translated_79_residues
MKRVISTQLQEEDIKIEKSLRPMYFDDYIGQQKIKDNLKIYIEAAKSRGEALDHVLFYGPRDLERQHLQESLQMRWAQR
>Mature_79_residues
MKRVISTQLQEEDIKIEKSLRPMYFDDYIGQQKIKDNLKIYIEAAKSRGEALDHVLFYGPRDLERQHLQESLQMRWAQR

Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday

COG id: COG2255

COG function: function code L; Holliday junction resolvasome, helicase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004605
- InterPro:   IPR008823
- InterPro:   IPR008824
- InterPro:   IPR011991
- ProDom:   PD005323 [H]

Pfam domain/function: PF05491 RuvB_C; PF05496 RuvB_N [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 9538; Mature: 9538

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVISTQLQEEDIKIEKSLRPMYFDDYIGQQKIKDNLKIYIEAAKSRGEALDHVLFYGP
CCCCHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHCCHHHHHHHHHHCCHHHHHHHHCCC
RDLERQHLQESLQMRWAQR
CCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRVISTQLQEEDIKIEKSLRPMYFDDYIGQQKIKDNLKIYIEAAKSRGEALDHVLFYGP
CCCCHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHCCHHHHHHHHHHCCHHHHHHHHCCC
RDLERQHLQESLQMRWAQR
CCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA