| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is gpr [H]
Identifier: 238923981
GI number: 238923981
Start: 1508466
End: 1509377
Strand: Direct
Name: gpr [H]
Synonym: EUBREC_1619
Alternate gene names: 238923981
Gene position: 1508466-1509377 (Clockwise)
Preceding gene: 238923979
Following gene: 238923982
Centisome position: 43.73
GC content: 47.26
Gene sequence:
>912_bases TTGTCGGCTGATAAATGGTGTGCAAGAACTGATCTGGCGCTTGAGACGCAGGAGAGCCTTAAAAAGGCAAACACAGATAT GAGAGGTGTGAATTTCTCTGAAAAAAAGCTGGATAATGGAATCATAGTCAGTGTAGTGACAATTGACTCAGAAAATGCAG TCAGGGCTACAGGCCGTCCTAAAGGAAAATATGTGACAATTGAGGCTGCTATGCTGTCCGAGGGAGATGAGGAGTGCTGT CAGGCTGTGACAAGGGAGCTTTCAAGAGAGCTTAAGAGCTTTGTAAAGGCTGTCTGTGACAAGCGTATATATGCGGCACT TGTTGTCGGACTTGGAAACAGAAATGTAACTCCTGATGCGCTTGGGCCAAGATGCGTTGACAGCTTGTTTATCACCCGCC ATATAGTAAAGGAATATGGCAGGTATGCGTTTAGCAACGAGAATGTAAACAGTGTGTGCGGCCTCGTGCCTGGCGTGATG GCTCAGACAGGCATGGAGTGCCTTGAGATAATAAAGGGTGTGGTGAGCGAGGTGAAACCTGATTTTGTTGTGACAATTGA TGCACTTGCGGCACGCAGTACAAAGAGGCTGGGCTGTACAATACAGCTGACGGATACAGGCATAGTGCCTGGAAGCGGGG TAGGAAACCACAGGGACGGTATTAACCATGACAATCTCGGAGTGCCTGTTATCGCAATTGGTATTCCGACAGTCATTGAT GCGGTGACCATTGTTTCAGATGCGGTAAATGCCAGCCGGGAGAACACCGCAAAGCTCATGTCGCCTAAGTTAAACGGCAT GTTTGTGACGCCGAAGGATATTGACGAGACGGTTAAGAGACTGGCAGGGCTTTTGTCTGAGGGCATAAATATGGCTTTTT CAAACGATGAATATGATGACTATAGTGAATAA
Upstream 100 bases:
>100_bases ATGTCAACCTTTCTGCTCTGTCAATACATATTTTGAAAAAAATTGCAAAAAATTAACATATATGTGATTTTGGAATATCA TACAGGGGAGGTGTATTGAT
Downstream 100 bases:
>100_bases TTTTATTGCTTCGAATATCATTAGAGCCAGCCGCATAAGCTTTATGTAGCAGGGGCTGCCTGATGCTTTAGATGGGAGAT GATATTGTGAAGAAAAAAAT
Product: germination protease
Products: NA
Alternate protein names: GPR endopeptidase; Germination proteinase; Spore protease [H]
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MSADKWCARTDLALETQESLKKANTDMRGVNFSEKKLDNGIIVSVVTIDSENAVRATGRPKGKYVTIEAAMLSEGDEECC QAVTRELSRELKSFVKAVCDKRIYAALVVGLGNRNVTPDALGPRCVDSLFITRHIVKEYGRYAFSNENVNSVCGLVPGVM AQTGMECLEIIKGVVSEVKPDFVVTIDALAARSTKRLGCTIQLTDTGIVPGSGVGNHRDGINHDNLGVPVIAIGIPTVID AVTIVSDAVNASRENTAKLMSPKLNGMFVTPKDIDETVKRLAGLLSEGINMAFSNDEYDDYSE
Sequences:
>Translated_303_residues MSADKWCARTDLALETQESLKKANTDMRGVNFSEKKLDNGIIVSVVTIDSENAVRATGRPKGKYVTIEAAMLSEGDEECC QAVTRELSRELKSFVKAVCDKRIYAALVVGLGNRNVTPDALGPRCVDSLFITRHIVKEYGRYAFSNENVNSVCGLVPGVM AQTGMECLEIIKGVVSEVKPDFVVTIDALAARSTKRLGCTIQLTDTGIVPGSGVGNHRDGINHDNLGVPVIAIGIPTVID AVTIVSDAVNASRENTAKLMSPKLNGMFVTPKDIDETVKRLAGLLSEGINMAFSNDEYDDYSE >Mature_302_residues SADKWCARTDLALETQESLKKANTDMRGVNFSEKKLDNGIIVSVVTIDSENAVRATGRPKGKYVTIEAAMLSEGDEECCQ AVTRELSRELKSFVKAVCDKRIYAALVVGLGNRNVTPDALGPRCVDSLFITRHIVKEYGRYAFSNENVNSVCGLVPGVMA QTGMECLEIIKGVVSEVKPDFVVTIDALAARSTKRLGCTIQLTDTGIVPGSGVGNHRDGINHDNLGVPVIAIGIPTVIDA VTIVSDAVNASRENTAKLMSPKLNGMFVTPKDIDETVKRLAGLLSEGINMAFSNDEYDDYSE
Specific function: Initiates the rapid degradation of small, acid-soluble proteins during spore germination [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase A25 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005080 - InterPro: IPR000671 - ProDom: PD041835 [H]
Pfam domain/function: PF03418 Peptidase_A25 [H]
EC number: =3.4.24.78 [H]
Molecular weight: Translated: 32663; Mature: 32531
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSADKWCARTDLALETQESLKKANTDMRGVNFSEKKLDNGIIVSVVTIDSENAVRATGRP CCCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEEEEEECCCCCEECCCCC KGKYVTIEAAMLSEGDEECCQAVTRELSRELKSFVKAVCDKRIYAALVVGLGNRNVTPDA CCCEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC LGPRCVDSLFITRHIVKEYGRYAFSNENVNSVCGLVPGVMAQTGMECLEIIKGVVSEVKP CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DFVVTIDALAARSTKRLGCTIQLTDTGIVPGSGVGNHRDGINHDNLGVPVIAIGIPTVID CEEEEHHHHHHCCHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHH AVTIVSDAVNASRENTAKLMSPKLNGMFVTPKDIDETVKRLAGLLSEGINMAFSNDEYDD HHHHHHHHHHCCHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHCCCEEECCCCCCC YSE CCC >Mature Secondary Structure SADKWCARTDLALETQESLKKANTDMRGVNFSEKKLDNGIIVSVVTIDSENAVRATGRP CCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEEEEEECCCCCEECCCCC KGKYVTIEAAMLSEGDEECCQAVTRELSRELKSFVKAVCDKRIYAALVVGLGNRNVTPDA CCCEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC LGPRCVDSLFITRHIVKEYGRYAFSNENVNSVCGLVPGVMAQTGMECLEIIKGVVSEVKP CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DFVVTIDALAARSTKRLGCTIQLTDTGIVPGSGVGNHRDGINHDNLGVPVIAIGIPTVID CEEEEHHHHHHCCHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHH AVTIVSDAVNASRENTAKLMSPKLNGMFVTPKDIDETVKRLAGLLSEGINMAFSNDEYDD HHHHHHHHHHCCHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHCCCEEECCCCCCC YSE CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]