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The map label for this gene is yqeN [H]

Identifier: 238923979

GI number: 238923979

Start: 1506913

End: 1507923

Strand: Direct

Name: yqeN [H]

Synonym: EUBREC_1617

Alternate gene names: 238923979

Gene position: 1506913-1507923 (Clockwise)

Preceding gene: 238923978

Following gene: 238923981

Centisome position: 43.68

GC content: 45.3

Gene sequence:

>1011_bases
ATGAAAACAATAGACAATGATATAAAAGCAGGAGATTTCAAAAAGGTTTATCTTCTGTATGGACAGGAGAGATACCTCAT
AAAACAGTACAGGGACAAGCTGATAAAGGCTATGGTCAGTGAGGGCGACAGCATGAACTTTTCATCGTTTGAGGGCGATG
GAATCAACCAGAAGGAGATAATTGACCTGGCGGAGACACTTCCGTTTTTTGCGGATAAAAGAGTGATTCTTATAGAGGAT
GCAGGCATTTTTTCAAAGGCAGGCGATGAGCTTGGAGAGTATTTAAAGGATTCACCTGAGAGCACGCACTTTATATTTGT
TGAGGAGAGCGTTGATAAGCGCTCAAAGCTTTATAAGGCGGCAGCCAAGTGCGGTAATCCTGTGGAGTTCAAGGAACAGA
CGGATGAGACACTTGCTAGATGGATAGGAATGAGGATTAGAAAAGATGGAAAGGGCATGAGCCAGGCTGCCTACAACAGC
TTTATAGAAAAAACCGGCACAGATATGGAAAATATCGACAAGGAGCTTGAGAAGCTGCTGTGCTACTGTATGGACAAGGA
CGTGATTGAGCTTTCGGATGTTGAGACTGTAACGACAGAGCAGATCACAAACAAGGTGTTTGAGATGGTTGATGCGATTG
CATCACACAAACAAAAGCGTGCGCTTGAGCTGTATTACGATCTGCTGGCACTTAAAGAGCCGGCCATGCGTATTATGTAT
CTTATATCGCGCCAGTTCAATATACTGATGAATGTGAAAGCCATGACAAATAAGGGCTTTGGCAACAAGGATATAGCATC
AAAGGCCGGATGTCCGGAGTGGGCGGTGCGCAAATATCAGGCGCAGTGCAGGGCATATTCGCTGGATGATTTAAAGAGGG
CTGTGAGAGATGGTGTGGCATATGAGGAGGCTGTTAAGACCGGCAGGATGAATGACCAGATGGCTGTGGAGCTTTTTATA
GTGCAGTACTCTGCAGATATGACCGGCACTCATGCGACAGGCAGTAAATGA

Upstream 100 bases:

>100_bases
CATCCGGCTGATGAAGCCATGGATAGGCTTATGGATGCAAAGTGCCGTATTTTATACACAATGCAAAGCGGTCAGATTAA
GTATAAAGAGAGTGCTATAT

Downstream 100 bases:

>100_bases
TATAACGCAAATATATATAAAAAACAGATAAAAAACAAATAAAAAAACCCATCGGTATGACGGCACCGATGGGTTTATTA
TTTATTGCTATATAGTAATT

Product: DNA polymerase III, delta subunit

Products: diphosphate; DNAn+1

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MKTIDNDIKAGDFKKVYLLYGQERYLIKQYRDKLIKAMVSEGDSMNFSSFEGDGINQKEIIDLAETLPFFADKRVILIED
AGIFSKAGDELGEYLKDSPESTHFIFVEESVDKRSKLYKAAAKCGNPVEFKEQTDETLARWIGMRIRKDGKGMSQAAYNS
FIEKTGTDMENIDKELEKLLCYCMDKDVIELSDVETVTTEQITNKVFEMVDAIASHKQKRALELYYDLLALKEPAMRIMY
LISRQFNILMNVKAMTNKGFGNKDIASKAGCPEWAVRKYQAQCRAYSLDDLKRAVRDGVAYEEAVKTGRMNDQMAVELFI
VQYSADMTGTHATGSK

Sequences:

>Translated_336_residues
MKTIDNDIKAGDFKKVYLLYGQERYLIKQYRDKLIKAMVSEGDSMNFSSFEGDGINQKEIIDLAETLPFFADKRVILIED
AGIFSKAGDELGEYLKDSPESTHFIFVEESVDKRSKLYKAAAKCGNPVEFKEQTDETLARWIGMRIRKDGKGMSQAAYNS
FIEKTGTDMENIDKELEKLLCYCMDKDVIELSDVETVTTEQITNKVFEMVDAIASHKQKRALELYYDLLALKEPAMRIMY
LISRQFNILMNVKAMTNKGFGNKDIASKAGCPEWAVRKYQAQCRAYSLDDLKRAVRDGVAYEEAVKTGRMNDQMAVELFI
VQYSADMTGTHATGSK
>Mature_336_residues
MKTIDNDIKAGDFKKVYLLYGQERYLIKQYRDKLIKAMVSEGDSMNFSSFEGDGINQKEIIDLAETLPFFADKRVILIED
AGIFSKAGDELGEYLKDSPESTHFIFVEESVDKRSKLYKAAAKCGNPVEFKEQTDETLARWIGMRIRKDGKGMSQAAYNS
FIEKTGTDMENIDKELEKLLCYCMDKDVIELSDVETVTTEQITNKVFEMVDAIASHKQKRALELYYDLLALKEPAMRIMY
LISRQFNILMNVKAMTNKGFGNKDIASKAGCPEWAVRKYQAQCRAYSLDDLKRAVRDGVAYEEAVKTGRMNDQMAVELFI
VQYSADMTGTHATGSK

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008921
- InterPro:   IPR010372
- InterPro:   IPR005790 [H]

Pfam domain/function: PF06144 DNA_pol3_delta [H]

EC number: 2.7.7.7

Molecular weight: Translated: 38213; Mature: 38213

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIDNDIKAGDFKKVYLLYGQERYLIKQYRDKLIKAMVSEGDSMNFSSFEGDGINQKEI
CCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
IDLAETLPFFADKRVILIEDAGIFSKAGDELGEYLKDSPESTHFIFVEESVDKRSKLYKA
HHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHH
AAKCGNPVEFKEQTDETLARWIGMRIRKDGKGMSQAAYNSFIEKTGTDMENIDKELEKLL
HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
CYCMDKDVIELSDVETVTTEQITNKVFEMVDAIASHKQKRALELYYDLLALKEPAMRIMY
HHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LISRQFNILMNVKAMTNKGFGNKDIASKAGCPEWAVRKYQAQCRAYSLDDLKRAVRDGVA
HHHHHHHHEEEEHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCH
YEEAVKTGRMNDQMAVELFIVQYSADMTGTHATGSK
HHHHHHHCCCCCHHEEEEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MKTIDNDIKAGDFKKVYLLYGQERYLIKQYRDKLIKAMVSEGDSMNFSSFEGDGINQKEI
CCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
IDLAETLPFFADKRVILIEDAGIFSKAGDELGEYLKDSPESTHFIFVEESVDKRSKLYKA
HHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHH
AAKCGNPVEFKEQTDETLARWIGMRIRKDGKGMSQAAYNSFIEKTGTDMENIDKELEKLL
HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
CYCMDKDVIELSDVETVTTEQITNKVFEMVDAIASHKQKRALELYYDLLALKEPAMRIMY
HHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LISRQFNILMNVKAMTNKGFGNKDIASKAGCPEWAVRKYQAQCRAYSLDDLKRAVRDGVA
HHHHHHHHEEEEHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCH
YEEAVKTGRMNDQMAVELFIVQYSADMTGTHATGSK
HHHHHHHCCCCCHHEEEEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]