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The map label for this gene is ftsY [H]

Identifier: 238923874

GI number: 238923874

Start: 1383545

End: 1384486

Strand: Direct

Name: ftsY [H]

Synonym: EUBREC_1502

Alternate gene names: 238923874

Gene position: 1383545-1384486 (Clockwise)

Preceding gene: 238923873

Following gene: 238923875

Centisome position: 40.11

GC content: 47.45

Gene sequence:

>942_bases
ATGGAAGAAAAAGAAAAGAAGCCGGGCTTTTTTAAGAGGCTCGTTTCAGGACTGACAAAGACCAGAGACAATATTGTTTC
AGGCATAGATTCACTTTTCAGTGGATTTTCACATATAGATGATGATTTTTATGAGGAGCTTGAGGAAATTCTCATCATGG
GAGATCTCGGGGTGAGAGCTACAGAGAGTATCATCGAGGATCTGCAGAGGAAGGTGAAGGAGCAGCACATCAAGGAGCCG
GCAGAGTGTAAGGAACTCTTGATTGAGAGCATCAAGGAGCAGATGAAGGTGGAGGAGACAGCCTACAGATTTGAAAATGA
AAAATCTGTTGTGCTTGTAATCGGTGTCAACGGAGTAGGAAAGACTACCACTGTCGGAAAGCTTGCAGGAAAGCTTAAGG
AACAGGGCAAGAAGGTAGTTATTGCAGGTGCTGATACCTTCAGGGCGGCAGCAGGCGACCAGCTGAAGGAATGGGCAAAC
CGCGCCGGAGTTGATATGATTGGCGGTGCCGAGGGTGCTGACCCGGGAGCTGTTGTATATGATGCAGTTGCAGCTTCTAA
GGCCAGAAACGCAGATGTGCTTCTCGTGGATACAGCCGGAAGACTCCACAACAAAAAGAATCTGATGAATGAGCTCGGAA
AGATTAATAAAATCCTGGAGAGTGAGTATCCGGATGCGTACAGAGAGACGCTCGTCGTGCTTGATGCGACCACAGGCCAG
AATGCACTGGTTCAGGCGAGAGAGTTTTCTGATGTGGCAAAGATTTCGGGCATCGTGCTTACTAAGATGGATGGTACGGC
AAAGGGCGGTATCGCTGTAGCGATACAGTCGGAGCTTTCAGTGCCGGTCAAGTATATCGGAGTCGGTGAGACTATCGATG
ATTTGCAGAAATTTGATTCGGACGAGTTCGTGAATGCATTGTTTGATACTAAAACGGAATAA

Upstream 100 bases:

>100_bases
ATGGTATCACGATGCAGGAAAAGGGTGTTTCCACACTCGTTTCAGTGAATCTAATAGAGAATGATCTGACACAGTAAAAT
TTTATTTATGGAGAGTTGAA

Downstream 100 bases:

>100_bases
TTTGAGAATATCTTTGAGCGTATAAGTTATATTGTTTATAATAATCTGATATATCAGTTTATATATATCTGTATGGAATT
TTTGGTATAATATAATGAAA

Product: cell division protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MEEKEKKPGFFKRLVSGLTKTRDNIVSGIDSLFSGFSHIDDDFYEELEEILIMGDLGVRATESIIEDLQRKVKEQHIKEP
AECKELLIESIKEQMKVEETAYRFENEKSVVLVIGVNGVGKTTTVGKLAGKLKEQGKKVVIAGADTFRAAAGDQLKEWAN
RAGVDMIGGAEGADPGAVVYDAVAASKARNADVLLVDTAGRLHNKKNLMNELGKINKILESEYPDAYRETLVVLDATTGQ
NALVQAREFSDVAKISGIVLTKMDGTAKGGIAVAIQSELSVPVKYIGVGETIDDLQKFDSDEFVNALFDTKTE

Sequences:

>Translated_313_residues
MEEKEKKPGFFKRLVSGLTKTRDNIVSGIDSLFSGFSHIDDDFYEELEEILIMGDLGVRATESIIEDLQRKVKEQHIKEP
AECKELLIESIKEQMKVEETAYRFENEKSVVLVIGVNGVGKTTTVGKLAGKLKEQGKKVVIAGADTFRAAAGDQLKEWAN
RAGVDMIGGAEGADPGAVVYDAVAASKARNADVLLVDTAGRLHNKKNLMNELGKINKILESEYPDAYRETLVVLDATTGQ
NALVQAREFSDVAKISGIVLTKMDGTAKGGIAVAIQSELSVPVKYIGVGETIDDLQKFDSDEFVNALFDTKTE
>Mature_313_residues
MEEKEKKPGFFKRLVSGLTKTRDNIVSGIDSLFSGFSHIDDDFYEELEEILIMGDLGVRATESIIEDLQRKVKEQHIKEP
AECKELLIESIKEQMKVEETAYRFENEKSVVLVIGVNGVGKTTTVGKLAGKLKEQGKKVVIAGADTFRAAAGDQLKEWAN
RAGVDMIGGAEGADPGAVVYDAVAASKARNADVLLVDTAGRLHNKKNLMNELGKINKILESEYPDAYRETLVVLDATTGQ
NALVQAREFSDVAKISGIVLTKMDGTAKGGIAVAIQSELSVPVKYIGVGETIDDLQKFDSDEFVNALFDTKTE

Specific function: Required for normal cell growth and morphogenesis; translocation of at least 1 protein is impaired in its absence [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI226371618, Length=202, Percent_Identity=34.6534653465347, Blast_Score=131, Evalue=8e-31,
Organism=Homo sapiens, GI4507215, Length=202, Percent_Identity=34.6534653465347, Blast_Score=130, Evalue=1e-30,
Organism=Homo sapiens, GI23308697, Length=289, Percent_Identity=29.4117647058824, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI295424842, Length=289, Percent_Identity=30.1038062283737, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI89061728, Length=135, Percent_Identity=31.8518518518519, Blast_Score=82, Evalue=6e-16,
Organism=Escherichia coli, GI1789874, Length=308, Percent_Identity=46.4285714285714, Blast_Score=259, Evalue=1e-70,
Organism=Escherichia coli, GI1788963, Length=201, Percent_Identity=40.2985074626866, Blast_Score=141, Evalue=5e-35,
Organism=Caenorhabditis elegans, GI17539958, Length=273, Percent_Identity=29.6703296703297, Blast_Score=123, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI193206261, Length=299, Percent_Identity=28.7625418060201, Blast_Score=99, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6325345, Length=212, Percent_Identity=36.7924528301887, Blast_Score=143, Evalue=4e-35,
Organism=Saccharomyces cerevisiae, GI6320498, Length=227, Percent_Identity=29.5154185022026, Blast_Score=86, Evalue=9e-18,
Organism=Drosophila melanogaster, GI17647949, Length=200, Percent_Identity=36.5, Blast_Score=129, Evalue=3e-30,
Organism=Drosophila melanogaster, GI24641198, Length=222, Percent_Identity=32.4324324324324, Blast_Score=91, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 34088; Mature: 34088

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEKEKKPGFFKRLVSGLTKTRDNIVSGIDSLFSGFSHIDDDFYEELEEILIMGDLGVRA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHH
TESIIEDLQRKVKEQHIKEPAECKELLIESIKEQMKVEETAYRFENEKSVVLVIGVNGVG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
KTTTVGKLAGKLKEQGKKVVIAGADTFRAAAGDQLKEWANRAGVDMIGGAEGADPGAVVY
CCHHHHHHHHHHHHCCCEEEEECCCHHHHHCCHHHHHHHHHCCCEECCCCCCCCCCHHHH
DAVAASKARNADVLLVDTAGRLHNKKNLMNELGKINKILESEYPDAYRETLVVLDATTGQ
HHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCEEEEEECCCCC
NALVQAREFSDVAKISGIVLTKMDGTAKGGIAVAIQSELSVPVKYIGVGETIDDLQKFDS
HHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHCCH
DEFVNALFDTKTE
HHHHHHHHCCCCC
>Mature Secondary Structure
MEEKEKKPGFFKRLVSGLTKTRDNIVSGIDSLFSGFSHIDDDFYEELEEILIMGDLGVRA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHH
TESIIEDLQRKVKEQHIKEPAECKELLIESIKEQMKVEETAYRFENEKSVVLVIGVNGVG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
KTTTVGKLAGKLKEQGKKVVIAGADTFRAAAGDQLKEWANRAGVDMIGGAEGADPGAVVY
CCHHHHHHHHHHHHCCCEEEEECCCHHHHHCCHHHHHHHHHCCCEECCCCCCCCCCHHHH
DAVAASKARNADVLLVDTAGRLHNKKNLMNELGKINKILESEYPDAYRETLVVLDATTGQ
HHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCEEEEEECCCCC
NALVQAREFSDVAKISGIVLTKMDGTAKGGIAVAIQSELSVPVKYIGVGETIDDLQKFDS
HHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHCCH
DEFVNALFDTKTE
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584053; 9384377; 8654983 [H]