| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is glnP [H]
Identifier: 238923861
GI number: 238923861
Start: 1369916
End: 1371442
Strand: Direct
Name: glnP [H]
Synonym: EUBREC_1489
Alternate gene names: 238923861
Gene position: 1369916-1371442 (Clockwise)
Preceding gene: 238923860
Following gene: 238923862
Centisome position: 39.71
GC content: 43.68
Gene sequence:
>1527_bases ATGAGGAATAATATGAAATCCATTAAGAAAAAACCGATTATGATTTTGCTTATGGCAGCATTAATGGCTACGTTCATCGT TAGCTTATGCGCATGCGGCAAAAGCGACAGCAAAAAGGTCGCTTGTGTGGACGATCTGGAGGGCGCAAAAATAGGTGTCC AGCTCGGTACCACAGGAGATATCTATGTATCTGATTATGAGAACGACGGTTCAGGCACCAAGGTAGAGAGATACAATAAG GGTGCTGATGCAGTCCAGGCATTAAAGGTCGGCAAGATTGACTGCGTAGTTATTGATGAGCAGCCGGCACTTGCCTTTGT AAAAGAAAACAAAGGACTTAAGATACTGGACGAGGAGTTTACCAACGAGGACTATGCATTCTGCCTGAAAAAGGGCAATA CAGAGCTTCGCGACAAGGTAAACACTGCGCTTGAAAAGCTGCAGCAGGATGGAACAGTTCAGAGCATCATCGACAACTAT ATCGGCTCTGAGGATCAGGTGGGAAAGACTCCCTACGTGAAGAAGGACATTGACAGGTCAAACGGAACACTTAAGGTAGG AACCAATGCAGAGTTCCCTCCATATGAGTACTATGAGGACAACAAGGTCACAGGAATTGATATGGATATCATGCAGGCCA TAGCCGATGAGCTTGGCATGGATATGCAGGTAGAGGATATGCAGTTTGACGCAATCATTGCCGCTGTATCATCAGGCAAG GTGGATGTCGGGGCAGCAGGCTTTACAGTGACAGAGGACAGACAGAAAAATGTTGATTTTACCGATACATATATTACCAC AAAGCAGGAGATTATCGTAAAAGACAGCCAGTCGGGTTCTTCTATCGGTATAAAGGAAAAGCTCTATGACAACTTTGTCA AGGACAATCGTTACATGTATATCGTAAAGGGTCTTGGCAATACAATAGTTATCACAATATTTGCCGTAATGCTTGGTATT GTGCTGGGATTTTTAATTGCGATAGTCAGAACCAGCCATGACAGAAACGGCGGTCTTGCCATATTAAACGGAATTTGCAA GGCATACCTGACTATCATCAGGGGAACACCTGTCATGATACAGCTTCTTATTATATACTATGTAGTGCTTGCATCTGTGA CCAACAAGATACTTGTAGCAGTCATTGCTTTCGGCCTCAACTCAGCTGCATATGTGGCAGAGATTGTGCGTTCAGGAATC ATGTCTGTAGATATAGGACAGTTTGAGGCAGGACGAAGCTTAGGACTCAACTACAGACAGACCATGAAGCTTGTTATCAT ACCGCAGGCTGTCAAAAATATACTTCCGGCGCTGCTTAACGAGTTTATCAGCCTCCTAAAGGAGACATCAATCAGTGGTT ATATTGGTATGATGGATCTGACAAAGGGTGGAGATATCATACGAAGCAACACATACGAGGCATTTATACCGCTTATTGCT GTAGCCCTTATTTATCTGGTTATAGTGATGCTTTTAAGCCACGGAGTAAGCAAACTTGAGAGGAGACTGAGAAGCAATGA AAGATAA
Upstream 100 bases:
>100_bases CATGATGCATAAATATTTGGTATAAAAGAGTCTGAGAAAATCAGGCTCTTTTATTTTATAAACTAATATGATATAATTGT GAATAAATATTTATACAGAA
Downstream 100 bases:
>100_bases TAACGTGATACTAGAGGTAAAAGACCTGCACAAGAGTTTTGGAGAGCAGGAGGTATTAAAGGGCATAAGCACAGAGGTGA ACAGAGGTGATGTAATTGCC
Product: amino acid ABC transporter, permease protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 508; Mature: 508
Protein sequence:
>508_residues MRNNMKSIKKKPIMILLMAALMATFIVSLCACGKSDSKKVACVDDLEGAKIGVQLGTTGDIYVSDYENDGSGTKVERYNK GADAVQALKVGKIDCVVIDEQPALAFVKENKGLKILDEEFTNEDYAFCLKKGNTELRDKVNTALEKLQQDGTVQSIIDNY IGSEDQVGKTPYVKKDIDRSNGTLKVGTNAEFPPYEYYEDNKVTGIDMDIMQAIADELGMDMQVEDMQFDAIIAAVSSGK VDVGAAGFTVTEDRQKNVDFTDTYITTKQEIIVKDSQSGSSIGIKEKLYDNFVKDNRYMYIVKGLGNTIVITIFAVMLGI VLGFLIAIVRTSHDRNGGLAILNGICKAYLTIIRGTPVMIQLLIIYYVVLASVTNKILVAVIAFGLNSAAYVAEIVRSGI MSVDIGQFEAGRSLGLNYRQTMKLVIIPQAVKNILPALLNEFISLLKETSISGYIGMMDLTKGGDIIRSNTYEAFIPLIA VALIYLVIVMLLSHGVSKLERRLRSNER
Sequences:
>Translated_508_residues MRNNMKSIKKKPIMILLMAALMATFIVSLCACGKSDSKKVACVDDLEGAKIGVQLGTTGDIYVSDYENDGSGTKVERYNK GADAVQALKVGKIDCVVIDEQPALAFVKENKGLKILDEEFTNEDYAFCLKKGNTELRDKVNTALEKLQQDGTVQSIIDNY IGSEDQVGKTPYVKKDIDRSNGTLKVGTNAEFPPYEYYEDNKVTGIDMDIMQAIADELGMDMQVEDMQFDAIIAAVSSGK VDVGAAGFTVTEDRQKNVDFTDTYITTKQEIIVKDSQSGSSIGIKEKLYDNFVKDNRYMYIVKGLGNTIVITIFAVMLGI VLGFLIAIVRTSHDRNGGLAILNGICKAYLTIIRGTPVMIQLLIIYYVVLASVTNKILVAVIAFGLNSAAYVAEIVRSGI MSVDIGQFEAGRSLGLNYRQTMKLVIIPQAVKNILPALLNEFISLLKETSISGYIGMMDLTKGGDIIRSNTYEAFIPLIA VALIYLVIVMLLSHGVSKLERRLRSNER >Mature_508_residues MRNNMKSIKKKPIMILLMAALMATFIVSLCACGKSDSKKVACVDDLEGAKIGVQLGTTGDIYVSDYENDGSGTKVERYNK GADAVQALKVGKIDCVVIDEQPALAFVKENKGLKILDEEFTNEDYAFCLKKGNTELRDKVNTALEKLQQDGTVQSIIDNY IGSEDQVGKTPYVKKDIDRSNGTLKVGTNAEFPPYEYYEDNKVTGIDMDIMQAIADELGMDMQVEDMQFDAIIAAVSSGK VDVGAAGFTVTEDRQKNVDFTDTYITTKQEIIVKDSQSGSSIGIKEKLYDNFVKDNRYMYIVKGLGNTIVITIFAVMLGI VLGFLIAIVRTSHDRNGGLAILNGICKAYLTIIRGTPVMIQLLIIYYVVLASVTNKILVAVIAFGLNSAAYVAEIVRSGI MSVDIGQFEAGRSLGLNYRQTMKLVIIPQAVKNILPALLNEFISLLKETSISGYIGMMDLTKGGDIIRSNTYEAFIPLIA VALIYLVIVMLLSHGVSKLERRLRSNER
Specific function: Part of the binding-protein-dependent transport system for glutamine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788226, Length=211, Percent_Identity=36.9668246445498, Blast_Score=141, Evalue=1e-34, Organism=Escherichia coli, GI1787030, Length=208, Percent_Identity=34.1346153846154, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1786873, Length=215, Percent_Identity=33.0232558139535, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI87082239, Length=214, Percent_Identity=29.4392523364486, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI1787087, Length=239, Percent_Identity=26.7782426778243, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI1787086, Length=220, Percent_Identity=25.9090909090909, Blast_Score=89, Evalue=7e-19, Organism=Escherichia coli, GI1786874, Length=223, Percent_Identity=26.9058295964126, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1788645, Length=215, Percent_Identity=30.6976744186047, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1788646, Length=215, Percent_Identity=27.906976744186, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1788228, Length=132, Percent_Identity=33.3333333333333, Blast_Score=79, Evalue=9e-16, Organism=Escherichia coli, GI48994930, Length=238, Percent_Identity=30.2521008403361, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1787031, Length=91, Percent_Identity=38.4615384615385, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1787088, Length=128, Percent_Identity=33.59375, Blast_Score=71, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 55754; Mature: 55754
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50928 ABC_TM1 ; PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNNMKSIKKKPIMILLMAALMATFIVSLCACGKSDSKKVACVDDLEGAKIGVQLGTTGD CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEECCCCC IYVSDYENDGSGTKVERYNKGADAVQALKVGKIDCVVIDEQPALAFVKENKGLKILDEEF EEEEECCCCCCCCCHHHCCCCHHHHHHHHCCCEEEEEECCCCCEEEEECCCCCEEECHHH TNEDYAFCLKKGNTELRDKVNTALEKLQQDGTVQSIIDNYIGSEDQVGKTPYVKKDIDRS CCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHCCCCC NGTLKVGTNAEFPPYEYYEDNKVTGIDMDIMQAIADELGMDMQVEDMQFDAIIAAVSSGK CCEEEECCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHCCCCEECCCHHHHHHHHHCCCC VDVGAAGFTVTEDRQKNVDFTDTYITTKQEIIVKDSQSGSSIGIKEKLYDNFVKDNRYMY EEECCCCCEEECCCCCCCCCCCCEEECCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEE IVKGLGNTIVITIFAVMLGIVLGFLIAIVRTSHDRNGGLAILNGICKAYLTIIRGTPVMI EEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHH QLLIIYYVVLASVTNKILVAVIAFGLNSAAYVAEIVRSGIMSVDIGQFEAGRSLGLNYRQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHH TMKLVIIPQAVKNILPALLNEFISLLKETSISGYIGMMDLTKGGDIIRSNTYEAFIPLIA HEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEECCCHHHHHHHHH VALIYLVIVMLLSHGVSKLERRLRSNER HHHHHHHHHHHHHHCHHHHHHHHHCCCC >Mature Secondary Structure MRNNMKSIKKKPIMILLMAALMATFIVSLCACGKSDSKKVACVDDLEGAKIGVQLGTTGD CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEECCCCC IYVSDYENDGSGTKVERYNKGADAVQALKVGKIDCVVIDEQPALAFVKENKGLKILDEEF EEEEECCCCCCCCCHHHCCCCHHHHHHHHCCCEEEEEECCCCCEEEEECCCCCEEECHHH TNEDYAFCLKKGNTELRDKVNTALEKLQQDGTVQSIIDNYIGSEDQVGKTPYVKKDIDRS CCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHCCCCC NGTLKVGTNAEFPPYEYYEDNKVTGIDMDIMQAIADELGMDMQVEDMQFDAIIAAVSSGK CCEEEECCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHCCCCEECCCHHHHHHHHHCCCC VDVGAAGFTVTEDRQKNVDFTDTYITTKQEIIVKDSQSGSSIGIKEKLYDNFVKDNRYMY EEECCCCCEEECCCCCCCCCCCCEEECCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEE IVKGLGNTIVITIFAVMLGIVLGFLIAIVRTSHDRNGGLAILNGICKAYLTIIRGTPVMI EEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHH QLLIIYYVVLASVTNKILVAVIAFGLNSAAYVAEIVRSGIMSVDIGQFEAGRSLGLNYRQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHH TMKLVIIPQAVKNILPALLNEFISLLKETSISGYIGMMDLTKGGDIIRSNTYEAFIPLIA HEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEECCCHHHHHHHHH VALIYLVIVMLLSHGVSKLERRLRSNER HHHHHHHHHHHHHHCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA