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The map label for this gene is xylR [H]

Identifier: 238923786

GI number: 238923786

Start: 1290381

End: 1291433

Strand: Direct

Name: xylR [H]

Synonym: EUBREC_1408

Alternate gene names: 238923786

Gene position: 1290381-1291433 (Clockwise)

Preceding gene: 238923785

Following gene: 238923788

Centisome position: 37.41

GC content: 39.03

Gene sequence:

>1053_bases
GTGCTGAACAATCATGTTACATCCAAGGCAGAAATCGCAAAAGAGTTAAACCTGAGTATGCCGACTGTATTAGCAAATGT
GAATGACTTGTTAGAAAAAGGGGTGTTGGAAGAAACTGGGGAATATGCTTCAACCGGTGGAAGGAAGGCAAAAAGTATAG
GGATTAATAAGTCATACTGTCATGCAATGGGAATTTTGATTACAGCGAATCATATAGAAATGGTATTAGTAAATCTTGGA
GATGAGATTATAAAAAAAGATCGCATCCGCTTAAAATTTACGGCAGAATTATCCTATTGTACAGAGGTGGCACAAAAGGT
CAAAACTTTTCTTGAAGGCGAATTAGCGAAGGATACGCTGCTTGGGATTGGAGTGGCGATTCCGGGAATTATTGATCAGA
AAGAACGGATCGTTTTAAAATCCCATGCTTTAGGTATAGAGAATTATAGTCTGCGCTTTTTAGAACAGGCGCTGGAAATT
CCGGTATATTTTGAAAACGATGCTAATGCTGCAATGCTTGCAGAAAAAAAACAAAAGTATCCAAATGCGATATATCTGTC
TTTGAACCACACCTTAGGAGGTGCATTCTGTATAGATGGAAAGCTGTTTCGAGGGCAAAACCAGAAAGCAGGGGAGTTCG
GTCACATGATACTCGTTCCCGGTGGAAGAAAGTGTTATTGTGGCAAATCAGGATGTGCAGATGCATATTGTGCTGCAAGT
GTACTGACACAAGATAACAGGCAGTCACTGGATGCATTTATGGAAAAAATTGAAAGTGGTGATGAAAAAACTTTGCAGAC
ATGGAATGAGTATCTGGATCATCTTGCTGTTTTGATATCAAATCTGCGGATGGCATATGATATGGATATCATACTAGGAG
GTGACGTGGGAGGTGTATTGTCAGATTATATGATACCACTGGGAGAAAAAGTGATGGCATATAATGGCTTTGAGCATGAT
GTTTCATACTTAAAAAATTGTTCGTATAAGAAAGAAGCGTCAGCTGTTGGAGCAGCGAAATACTTTTTTACAAAACATAT
GGGTGAATTGTAA

Upstream 100 bases:

>100_bases
AAGAGTATATAATTCTTTTGTAAAATATTTAATAAAAGAGGATAAGAAAACGGAAAATAAAGATAAAAGAAATATAACAA
GAAAAAAGATAATTAATTAT

Downstream 100 bases:

>100_bases
ATTTTTTGATCCTCATATCATATTATAGTAAAAAACGGAAAGAAAACAGTAACTACGGTTTCCTTTCCGTTTTTTTTGCG
TGTTAATTGTGAAAAATACA

Product: putative N-acetylglucosamine repressor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MLNNHVTSKAEIAKELNLSMPTVLANVNDLLEKGVLEETGEYASTGGRKAKSIGINKSYCHAMGILITANHIEMVLVNLG
DEIIKKDRIRLKFTAELSYCTEVAQKVKTFLEGELAKDTLLGIGVAIPGIIDQKERIVLKSHALGIENYSLRFLEQALEI
PVYFENDANAAMLAEKKQKYPNAIYLSLNHTLGGAFCIDGKLFRGQNQKAGEFGHMILVPGGRKCYCGKSGCADAYCAAS
VLTQDNRQSLDAFMEKIESGDEKTLQTWNEYLDHLAVLISNLRMAYDMDIILGGDVGGVLSDYMIPLGEKVMAYNGFEHD
VSYLKNCSYKKEASAVGAAKYFFTKHMGEL

Sequences:

>Translated_350_residues
MLNNHVTSKAEIAKELNLSMPTVLANVNDLLEKGVLEETGEYASTGGRKAKSIGINKSYCHAMGILITANHIEMVLVNLG
DEIIKKDRIRLKFTAELSYCTEVAQKVKTFLEGELAKDTLLGIGVAIPGIIDQKERIVLKSHALGIENYSLRFLEQALEI
PVYFENDANAAMLAEKKQKYPNAIYLSLNHTLGGAFCIDGKLFRGQNQKAGEFGHMILVPGGRKCYCGKSGCADAYCAAS
VLTQDNRQSLDAFMEKIESGDEKTLQTWNEYLDHLAVLISNLRMAYDMDIILGGDVGGVLSDYMIPLGEKVMAYNGFEHD
VSYLKNCSYKKEASAVGAAKYFFTKHMGEL
>Mature_350_residues
MLNNHVTSKAEIAKELNLSMPTVLANVNDLLEKGVLEETGEYASTGGRKAKSIGINKSYCHAMGILITANHIEMVLVNLG
DEIIKKDRIRLKFTAELSYCTEVAQKVKTFLEGELAKDTLLGIGVAIPGIIDQKERIVLKSHALGIENYSLRFLEQALEI
PVYFENDANAAMLAEKKQKYPNAIYLSLNHTLGGAFCIDGKLFRGQNQKAGEFGHMILVPGGRKCYCGKSGCADAYCAAS
VLTQDNRQSLDAFMEKIESGDEKTLQTWNEYLDHLAVLISNLRMAYDMDIILGGDVGGVLSDYMIPLGEKVMAYNGFEHD
VSYLKNCSYKKEASAVGAAKYFFTKHMGEL

Specific function: Transcriptional repressor of xylose-utilizing enzymes [H]

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

Organism=Homo sapiens, GI190014632, Length=207, Percent_Identity=28.0193236714976, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI4885285, Length=207, Percent_Identity=28.0193236714976, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI298566315, Length=207, Percent_Identity=27.536231884058, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI298566325, Length=207, Percent_Identity=28.0193236714976, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1786891, Length=246, Percent_Identity=25.609756097561, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1787878, Length=309, Percent_Identity=22.9773462783171, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1787363, Length=202, Percent_Identity=28.7128712871287, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI87082230, Length=186, Percent_Identity=28.494623655914, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 38576; Mature: 38576

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNNHVTSKAEIAKELNLSMPTVLANVNDLLEKGVLEETGEYASTGGRKAKSIGINKSYC
CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHCCCHHHCCCCCHHHCCCCHHHH
HAMGILITANHIEMVLVNLGDEIIKKDRIRLKFTAELSYCTEVAQKVKTFLEGELAKDTL
HHHHHEEEECCCEEEEECCCHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHCCHHHHHHH
LGIGVAIPGIIDQKERIVLKSHALGIENYSLRFLEQALEIPVYFENDANAAMLAEKKQKY
HHHHHHCCCCCCCCHHEEEHHHHCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCC
PNAIYLSLNHTLGGAFCIDGKLFRGQNQKAGEFGHMILVPGGRKCYCGKSGCADAYCAAS
CCEEEEEEECCCCCEEEECCEEECCCCCCCCCCCCEEEECCCCEEECCCCCCCHHHHHHH
VLTQDNRQSLDAFMEKIESGDEKTLQTWNEYLDHLAVLISNLRMAYDMDIILGGDVGGVL
HHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHH
SDYMIPLGEKVMAYNGFEHDVSYLKNCSYKKEASAVGAAKYFFTKHMGEL
HHHHHCCCCHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLNNHVTSKAEIAKELNLSMPTVLANVNDLLEKGVLEETGEYASTGGRKAKSIGINKSYC
CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHCCCHHHCCCCCHHHCCCCHHHH
HAMGILITANHIEMVLVNLGDEIIKKDRIRLKFTAELSYCTEVAQKVKTFLEGELAKDTL
HHHHHEEEECCCEEEEECCCHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHCCHHHHHHH
LGIGVAIPGIIDQKERIVLKSHALGIENYSLRFLEQALEIPVYFENDANAAMLAEKKQKY
HHHHHHCCCCCCCCHHEEEHHHHCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCC
PNAIYLSLNHTLGGAFCIDGKLFRGQNQKAGEFGHMILVPGGRKCYCGKSGCADAYCAAS
CCEEEEEEECCCCCEEEECCEEECCCCCCCCCCCCEEEECCCCEEECCCCCCCHHHHHHH
VLTQDNRQSLDAFMEKIESGDEKTLQTWNEYLDHLAVLISNLRMAYDMDIILGGDVGGVL
HHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHH
SDYMIPLGEKVMAYNGFEHDVSYLKNCSYKKEASAVGAAKYFFTKHMGEL
HHHHHCCCCHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2544559 [H]