| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238923492
Identifier: 238923492
GI number: 238923492
Start: 1019100
End: 1020788
Strand: Direct
Name: 238923492
Synonym: EUBREC_1112
Alternate gene names: NA
Gene position: 1019100-1020788 (Clockwise)
Preceding gene: 238923491
Following gene: 238923493
Centisome position: 29.54
GC content: 39.49
Gene sequence:
>1689_bases ATGAGTTTTACATATGAAAATCAAGGAAACAATACTTATCTGGTATATAAAATAGGAGCTTCGGATAATGTGGATACAAT GAGCCTTGGAATGATTACTAATAATAAGATAGATGGAATTGTTCCGACTCTGTTCACCCAGTCAGATACTGATAGATTTA TTAAATATAATATTTCTGCAAAAGTGTCAGCAAAAGAGTTTTTATCAGGAGTTGTAAATAAGAAGAGATTACTAGGTGTG TTTATCAGCGTATTAAAGGCAATTAAATCAACAGAGGAATATATGATTGATGCGAGAAGCCTGTTGATTGATTTGGAACA TATCTATGTTGATGTGTCAAAGTGTGATGCAATGCTGGTATGTCTTCCTTTGGTCAGACAGAATGAGTCTGTTAATATTC CTATGTTTTTTAAGCAGATAATGTTTAGTACACAGTTTGACCAAAATGAGAATTGCGATTATGTTGCACAGATTATTAAT TATCTGAATAGTACACCTGTATTTTCTGTGGATGCTTTTGAAAAGCTCCTGATGGACATAGATGCTGATAATTTAAATAT TGCAGCTTCAAAGGCTGTTGCTGGTCAGCAAAAACCGGTTCAACCACAGAGCCAGTCACAGAGTCAGCAGCCTAAACCTA TGCAGCCTGCTATGAATCAGCTAAAGAATACACAGGTACAGACAAATATGCCATCTCAGGGGAAAATGCAATCACAGCGT GAAACACAATCTGCAAATAATGTGGTACAGCCTAATCAGGTGAATTTTGCAGTACCTAATATGAATCCACAAAACCAGAA TAGAATTAATAATAATGTGCAGATGGGGACGAATATTTCAGGTACATATGTGGAAACAACCAGTGAGAAGCAGATGTCCA TGTTTGGACTTTTGACACATTACAGTAAAGAAAATAAGCAGATTTACGAAAGACAAAAAGCCCAAAGAAAGGCTCAAAAG GAAGCAGAAAAAAACGGAGCAGCAATGCCTGGTCAAAATGTGAAGGCATCAAATACTTCATTCGCCATCCCAGGCCAGCC ACCACAGCAGCGTCCACAGCCTGCACAGGCACAGCCACAAAATGTAATGCCACAGCAGCCTCAACAACAATTTGTACAGC CACAGCGACAGTTCACACAGTCAAATCAGCCACAGCATCAGTTTGCACAGCCGCAACCGATGCCACAGGCACAGCAAAAG CCGGCGCAACAGGTTCAGCCACAGCCGGTGCAGAATCAAAATGCAAATACAGGCATGACCGGAAATCCATCAGTTCCACC ACAGATTTTGGAGAACATGACAAAGGCCGGTAATTTTGGAGAGACTACAGTGCTTGGAGTCGGTTCAGAGGCTGGAGAGA CCACTGTTTTGGGAACATCACAGGCTCAGATTATTAAGCCTTATCTGCTTCGAATAAAGAATAATGAGAGAATAGAACTC AACAAGCCGGTATTTAGAATAGGAAAAGAAAGAAGCTATGTGGATTATTTTGTGAGTGACAATACAGCGGTCAGCAGAAG CCACGCAAATATCATTAACAAGGACAATGAGTTTTATATTGTTGATACCAATTCAACAAACCATACATATGTGAATGGTT CAATGATTCAGAGCAATGTGGAGACTAAAATCGAGCATGGAACGAAAATCAGACTGGCGAATGAGGATTTTGAATTTTTC ATGTACTAA
Upstream 100 bases:
>100_bases CAATGAACAGGGCAAGACATTTGTTAAGACGGATGATAAATGGCAGGTTTTGACACTATATTTATACAATCATGAATCAT AGAACAAAGGAGACAAAGGC
Downstream 100 bases:
>100_bases TAAAAAAAATCACAGGATAAATATTACATATATTGAGGAAATGGCATGGATTACGAAATTGCAGCCCAGACAGATGTGGG AACAGTCAAGAAAACAAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 562; Mature: 561
Protein sequence:
>562_residues MSFTYENQGNNTYLVYKIGASDNVDTMSLGMITNNKIDGIVPTLFTQSDTDRFIKYNISAKVSAKEFLSGVVNKKRLLGV FISVLKAIKSTEEYMIDARSLLIDLEHIYVDVSKCDAMLVCLPLVRQNESVNIPMFFKQIMFSTQFDQNENCDYVAQIIN YLNSTPVFSVDAFEKLLMDIDADNLNIAASKAVAGQQKPVQPQSQSQSQQPKPMQPAMNQLKNTQVQTNMPSQGKMQSQR ETQSANNVVQPNQVNFAVPNMNPQNQNRINNNVQMGTNISGTYVETTSEKQMSMFGLLTHYSKENKQIYERQKAQRKAQK EAEKNGAAMPGQNVKASNTSFAIPGQPPQQRPQPAQAQPQNVMPQQPQQQFVQPQRQFTQSNQPQHQFAQPQPMPQAQQK PAQQVQPQPVQNQNANTGMTGNPSVPPQILENMTKAGNFGETTVLGVGSEAGETTVLGTSQAQIIKPYLLRIKNNERIEL NKPVFRIGKERSYVDYFVSDNTAVSRSHANIINKDNEFYIVDTNSTNHTYVNGSMIQSNVETKIEHGTKIRLANEDFEFF MY
Sequences:
>Translated_562_residues MSFTYENQGNNTYLVYKIGASDNVDTMSLGMITNNKIDGIVPTLFTQSDTDRFIKYNISAKVSAKEFLSGVVNKKRLLGV FISVLKAIKSTEEYMIDARSLLIDLEHIYVDVSKCDAMLVCLPLVRQNESVNIPMFFKQIMFSTQFDQNENCDYVAQIIN YLNSTPVFSVDAFEKLLMDIDADNLNIAASKAVAGQQKPVQPQSQSQSQQPKPMQPAMNQLKNTQVQTNMPSQGKMQSQR ETQSANNVVQPNQVNFAVPNMNPQNQNRINNNVQMGTNISGTYVETTSEKQMSMFGLLTHYSKENKQIYERQKAQRKAQK EAEKNGAAMPGQNVKASNTSFAIPGQPPQQRPQPAQAQPQNVMPQQPQQQFVQPQRQFTQSNQPQHQFAQPQPMPQAQQK PAQQVQPQPVQNQNANTGMTGNPSVPPQILENMTKAGNFGETTVLGVGSEAGETTVLGTSQAQIIKPYLLRIKNNERIEL NKPVFRIGKERSYVDYFVSDNTAVSRSHANIINKDNEFYIVDTNSTNHTYVNGSMIQSNVETKIEHGTKIRLANEDFEFF MY >Mature_561_residues SFTYENQGNNTYLVYKIGASDNVDTMSLGMITNNKIDGIVPTLFTQSDTDRFIKYNISAKVSAKEFLSGVVNKKRLLGVF ISVLKAIKSTEEYMIDARSLLIDLEHIYVDVSKCDAMLVCLPLVRQNESVNIPMFFKQIMFSTQFDQNENCDYVAQIINY LNSTPVFSVDAFEKLLMDIDADNLNIAASKAVAGQQKPVQPQSQSQSQQPKPMQPAMNQLKNTQVQTNMPSQGKMQSQRE TQSANNVVQPNQVNFAVPNMNPQNQNRINNNVQMGTNISGTYVETTSEKQMSMFGLLTHYSKENKQIYERQKAQRKAQKE AEKNGAAMPGQNVKASNTSFAIPGQPPQQRPQPAQAQPQNVMPQQPQQQFVQPQRQFTQSNQPQHQFAQPQPMPQAQQKP AQQVQPQPVQNQNANTGMTGNPSVPPQILENMTKAGNFGETTVLGVGSEAGETTVLGTSQAQIIKPYLLRIKNNERIELN KPVFRIGKERSYVDYFVSDNTAVSRSHANIINKDNEFYIVDTNSTNHTYVNGSMIQSNVETKIEHGTKIRLANEDFEFFM Y
Specific function: Unknown
COG id: COG1716
COG function: function code T; FOG: FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63109; Mature: 62978
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFTYENQGNNTYLVYKIGASDNVDTMSLGMITNNKIDGIVPTLFTQSDTDRFIKYNISA CCCEEECCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCHHHHCCCCCCCCEEEEECCC KVSAKEFLSGVVNKKRLLGVFISVLKAIKSTEEYMIDARSLLIDLEHIYVDVSKCDAMLV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHEEEHHHHCCHHH CLPLVRQNESVNIPMFFKQIMFSTQFDQNENCDYVAQIINYLNSTPVFSVDAFEKLLMDI HHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHC DADNLNIAASKAVAGQQKPVQPQSQSQSQQPKPMQPAMNQLKNTQVQTNMPSQGKMQSQR CCCCCEEEEHHHHCCCCCCCCCCHHCCCCCCCCHHHHHHHHHCCEEECCCCCCCCHHHHH ETQSANNVVQPNQVNFAVPNMNPQNQNRINNNVQMGTNISGTYVETTSEKQMSMFGLLTH HHHHHCCCCCCCCEEEEECCCCCCCHHHCCCCEEECCCCCCCEEECCCHHHHHHHHHHHH YSKENKQIYERQKAQRKAQKEAEKNGAAMPGQNVKASNTSFAIPGQPPQQRPQPAQAQPQ HCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC NVMPQQPQQQFVQPQRQFTQSNQPQHQFAQPQPMPQAQQKPAQQVQPQPVQNQNANTGMT CCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHCHHHHCCCCCCCCCCCCCCCC GNPSVPPQILENMTKAGNFGETTVLGVGSEAGETTVLGTSQAQIIKPYLLRIKNNERIEL CCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEECCHHHHHCCHHEEECCCCEEEE NKPVFRIGKERSYVDYFVSDNTAVSRSHANIINKDNEFYIVDTNSTNHTYVNGSMIQSNV CCCHHHHCCCCCEEEEEECCCCEECCCHHHHCCCCCCEEEEECCCCCCEEECCHHHHCCH ETKIEHGTKIRLANEDFEFFMY HHHHCCCCEEEEECCCCEEEEC >Mature Secondary Structure SFTYENQGNNTYLVYKIGASDNVDTMSLGMITNNKIDGIVPTLFTQSDTDRFIKYNISA CCEEECCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCHHHHCCCCCCCCEEEEECCC KVSAKEFLSGVVNKKRLLGVFISVLKAIKSTEEYMIDARSLLIDLEHIYVDVSKCDAMLV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHEEEHHHHCCHHH CLPLVRQNESVNIPMFFKQIMFSTQFDQNENCDYVAQIINYLNSTPVFSVDAFEKLLMDI HHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHC DADNLNIAASKAVAGQQKPVQPQSQSQSQQPKPMQPAMNQLKNTQVQTNMPSQGKMQSQR CCCCCEEEEHHHHCCCCCCCCCCHHCCCCCCCCHHHHHHHHHCCEEECCCCCCCCHHHHH ETQSANNVVQPNQVNFAVPNMNPQNQNRINNNVQMGTNISGTYVETTSEKQMSMFGLLTH HHHHHCCCCCCCCEEEEECCCCCCCHHHCCCCEEECCCCCCCEEECCCHHHHHHHHHHHH YSKENKQIYERQKAQRKAQKEAEKNGAAMPGQNVKASNTSFAIPGQPPQQRPQPAQAQPQ HCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC NVMPQQPQQQFVQPQRQFTQSNQPQHQFAQPQPMPQAQQKPAQQVQPQPVQNQNANTGMT CCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHCHHHHCCCCCCCCCCCCCCCC GNPSVPPQILENMTKAGNFGETTVLGVGSEAGETTVLGTSQAQIIKPYLLRIKNNERIEL CCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEECCHHHHHCCHHEEECCCCEEEE NKPVFRIGKERSYVDYFVSDNTAVSRSHANIINKDNEFYIVDTNSTNHTYVNGSMIQSNV CCCHHHHCCCCCEEEEEECCCCEECCCHHHHCCCCCCEEEEECCCCCCEEECCHHHHCCH ETKIEHGTKIRLANEDFEFFMY HHHHCCCCEEEEECCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA