| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
Click here to switch to the map view.
The map label for this gene is 238923418
Identifier: 238923418
GI number: 238923418
Start: 932672
End: 934297
Strand: Direct
Name: 238923418
Synonym: EUBREC_1038
Alternate gene names: NA
Gene position: 932672-934297 (Clockwise)
Preceding gene: 238923416
Following gene: 238923419
Centisome position: 27.04
GC content: 40.65
Gene sequence:
>1626_bases ATGAAAAAAAGATTGGTTTCCTCAGCGGTTACAGTGGCATTGTTTATCGGACTTATAGCCGGTGTTACTTTTCAATCGTC AGATAAAAAAGAAATAAAGCATTTTACGGCTTTTTTTTCTGTAGAAGGAGATAATATAGATCCGGATAATGATATAAAGC AGCTCATAGCAGAGCAGATCGGTGCTGAATGTGAGGAAACCTGGCTTGTTGGACAGGATAAGGACGATGCAATAAATTCT CTAATAGCAACCGGGAAATATCCGGATTTTGTATTGGGTGAGACTGCGCTGTATGAGGCAGATGCACTCATTCCAATAGA TGAATACTGGGACGATTATCCGAACATAAAAGAATATCTCAGTGATGAACAATGGGAAAAGTTAAGACAGCCGGATGGAC ACATATATTGGATTCCACAGTTTGGAGTATCACATGGGGATGATGTGGAGATGCTGCATAATGGTGAAGCCTTCTGGATT CAGACAAGAGTATTAAAATGGGCTGGATATCCAAAGATTACAACGATAGAGCAGTACTTTGACCTGATAGAAAGCTATGT ACAGGCAAATCCAACAATGCCGGATGGAACAGAAAATATACCATTTACGATGCTTTGTGATGACTGGCGGTATTTTTGTC TTGAAAATGTACCGCAGTTTCTGGACGGATTTCCAAACGATGGAAGCTGTATGGTGGACACGGAAACCAAAAAAGTGATG GATTACAATGTGAGCGACACAGCCAAAAGATATTTCGGAAAGCTTAACGAAGAGTTCCATAAAGGAATAATGGATCCCGG GGCGTTTAATGCCACCTATGATCAATATCTGGATAAGCTGTCAACAGGAGCTGTGCTTGGGATGGTCGACCAGTGGTGGC AGTTTTATTATACAATAGATCCTGTATTCAAAAAACAGAATCTGGCACAGCTTGGGTGTGATTATGTTCCTCTTCCTGTC ACGATTGATGATGGTATTCACAACAGATGGCATACAAACAGGATGGCAGAAATAGATTATTCTTCAGGAGTGTCCATTAC CACCTCCTGTAAAGATATCGAAGGTGCGATGAAGTTTGTCAGTGATCTTCTGGAATCTGATATCATAAGAGAAAGGTTCT GGGGGGAGGAGGGCAAGGACTATTCAGTCGATGAAAACGGTTTGTTTTACCTTACCAATGAGCAGGCAGAGAAAAAAAGT GACAGCTCATATCATACAGCGCATATGTGTTCGTACTCATACTTTCCAAGAGTGGAGGGAATGCTTGATGATGGTATAAA TGCGTTTTCAATGGAGTTTCAGCAGAACGAGTTTTTCAGAAATCAGCCTGTGGATATTCAGGAATGTTTTAAAGCCTATG GAGTGGAAAACTATGTAGATATGCTTGGAAAAAATGAGGCTCCCGGCTCGTGGTATCCGATGTATTCATATTCAGATTCA ATTCCTTCGACCTCTGAATGTGGGAAAGCAAAGAATAATATTGTGGCAGTAAAGAAAATATGGCTGCCGCAGGTTATCAT GGCAGATGATTTTGGTGCTGCCTGGGATCAGTATATGGAGAAGTACAATGCCTGTAATCCACAGATATATTTTGATTATT TACAGCAAAAGGTAAATGAAAATTAG
Upstream 100 bases:
>100_bases TTATTTTAGGATTTGTAAAAATATTTTTTATGGAATATAATGACTATTATGCAATTTTATAGCAGAGACTGAACAAAAGA AAATAGGGAGAAAACATGGT
Downstream 100 bases:
>100_bases CAATATTTGAATACTGTTTGGCAATTTATTAATAGAATAACAAGCCCCTGTTCGTTTACACTTATATATATCAATAAACG AATGGGGGGATTTTATTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 541; Mature: 541
Protein sequence:
>541_residues MKKRLVSSAVTVALFIGLIAGVTFQSSDKKEIKHFTAFFSVEGDNIDPDNDIKQLIAEQIGAECEETWLVGQDKDDAINS LIATGKYPDFVLGETALYEADALIPIDEYWDDYPNIKEYLSDEQWEKLRQPDGHIYWIPQFGVSHGDDVEMLHNGEAFWI QTRVLKWAGYPKITTIEQYFDLIESYVQANPTMPDGTENIPFTMLCDDWRYFCLENVPQFLDGFPNDGSCMVDTETKKVM DYNVSDTAKRYFGKLNEEFHKGIMDPGAFNATYDQYLDKLSTGAVLGMVDQWWQFYYTIDPVFKKQNLAQLGCDYVPLPV TIDDGIHNRWHTNRMAEIDYSSGVSITTSCKDIEGAMKFVSDLLESDIIRERFWGEEGKDYSVDENGLFYLTNEQAEKKS DSSYHTAHMCSYSYFPRVEGMLDDGINAFSMEFQQNEFFRNQPVDIQECFKAYGVENYVDMLGKNEAPGSWYPMYSYSDS IPSTSECGKAKNNIVAVKKIWLPQVIMADDFGAAWDQYMEKYNACNPQIYFDYLQQKVNEN
Sequences:
>Translated_541_residues MKKRLVSSAVTVALFIGLIAGVTFQSSDKKEIKHFTAFFSVEGDNIDPDNDIKQLIAEQIGAECEETWLVGQDKDDAINS LIATGKYPDFVLGETALYEADALIPIDEYWDDYPNIKEYLSDEQWEKLRQPDGHIYWIPQFGVSHGDDVEMLHNGEAFWI QTRVLKWAGYPKITTIEQYFDLIESYVQANPTMPDGTENIPFTMLCDDWRYFCLENVPQFLDGFPNDGSCMVDTETKKVM DYNVSDTAKRYFGKLNEEFHKGIMDPGAFNATYDQYLDKLSTGAVLGMVDQWWQFYYTIDPVFKKQNLAQLGCDYVPLPV TIDDGIHNRWHTNRMAEIDYSSGVSITTSCKDIEGAMKFVSDLLESDIIRERFWGEEGKDYSVDENGLFYLTNEQAEKKS DSSYHTAHMCSYSYFPRVEGMLDDGINAFSMEFQQNEFFRNQPVDIQECFKAYGVENYVDMLGKNEAPGSWYPMYSYSDS IPSTSECGKAKNNIVAVKKIWLPQVIMADDFGAAWDQYMEKYNACNPQIYFDYLQQKVNEN >Mature_541_residues MKKRLVSSAVTVALFIGLIAGVTFQSSDKKEIKHFTAFFSVEGDNIDPDNDIKQLIAEQIGAECEETWLVGQDKDDAINS LIATGKYPDFVLGETALYEADALIPIDEYWDDYPNIKEYLSDEQWEKLRQPDGHIYWIPQFGVSHGDDVEMLHNGEAFWI QTRVLKWAGYPKITTIEQYFDLIESYVQANPTMPDGTENIPFTMLCDDWRYFCLENVPQFLDGFPNDGSCMVDTETKKVM DYNVSDTAKRYFGKLNEEFHKGIMDPGAFNATYDQYLDKLSTGAVLGMVDQWWQFYYTIDPVFKKQNLAQLGCDYVPLPV TIDDGIHNRWHTNRMAEIDYSSGVSITTSCKDIEGAMKFVSDLLESDIIRERFWGEEGKDYSVDENGLFYLTNEQAEKKS DSSYHTAHMCSYSYFPRVEGMLDDGINAFSMEFQQNEFFRNQPVDIQECFKAYGVENYVDMLGKNEAPGSWYPMYSYSDS IPSTSECGKAKNNIVAVKKIWLPQVIMADDFGAAWDQYMEKYNACNPQIYFDYLQQKVNEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62205; Mature: 62205
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRLVSSAVTVALFIGLIAGVTFQSSDKKEIKHFTAFFSVEGDNIDPDNDIKQLIAEQI CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHH GAECEETWLVGQDKDDAINSLIATGKYPDFVLGETALYEADALIPIDEYWDDYPNIKEYL CCCCHHHEECCCCCHHHHHHHHHCCCCCCHHCCCHHHCCCCCCCCHHHHHCCCCCHHHHH SDEQWEKLRQPDGHIYWIPQFGVSHGDDVEMLHNGEAFWIQTRVLKWAGYPKITTIEQYF CCHHHHHHCCCCCCEEEEECCCCCCCCCHHEEECCCEEEEEEEHHHHCCCCCCHHHHHHH DLIESYVQANPTMPDGTENIPFTMLCDDWRYFCLENVPQFLDGFPNDGSCMVDTETKKVM HHHHHHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHE DYNVSDTAKRYFGKLNEEFHKGIMDPGAFNATYDQYLDKLSTGAVLGMVDQWWQFYYTID ECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHEEC PVFKKQNLAQLGCDYVPLPVTIDDGIHNRWHTNRMAEIDYSSGVSITTSCKDIEGAMKFV HHHHHCCHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCEEEECHHHHHHHHHHH SDLLESDIIRERFWGEEGKDYSVDENGLFYLTNEQAEKKSDSSYHTAHMCSYSYFPRVEG HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHCCCCCCCHHHHHCCCCCCCCCC MLDDGINAFSMEFQQNEFFRNQPVDIQECFKAYGVENYVDMLGKNEAPGSWYPMYSYSDS HHHCCCCCEEEHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHCCCCCCCCEEECCCCCCC IPSTSECGKAKNNIVAVKKIWLPQVIMADDFGAAWDQYMEKYNACNPQIYFDYLQQKVNE CCCCHHHCCCCCCEEEEEHHCCCCEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCC N C >Mature Secondary Structure MKKRLVSSAVTVALFIGLIAGVTFQSSDKKEIKHFTAFFSVEGDNIDPDNDIKQLIAEQI CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHH GAECEETWLVGQDKDDAINSLIATGKYPDFVLGETALYEADALIPIDEYWDDYPNIKEYL CCCCHHHEECCCCCHHHHHHHHHCCCCCCHHCCCHHHCCCCCCCCHHHHHCCCCCHHHHH SDEQWEKLRQPDGHIYWIPQFGVSHGDDVEMLHNGEAFWIQTRVLKWAGYPKITTIEQYF CCHHHHHHCCCCCCEEEEECCCCCCCCCHHEEECCCEEEEEEEHHHHCCCCCCHHHHHHH DLIESYVQANPTMPDGTENIPFTMLCDDWRYFCLENVPQFLDGFPNDGSCMVDTETKKVM HHHHHHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHE DYNVSDTAKRYFGKLNEEFHKGIMDPGAFNATYDQYLDKLSTGAVLGMVDQWWQFYYTID ECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHEEC PVFKKQNLAQLGCDYVPLPVTIDDGIHNRWHTNRMAEIDYSSGVSITTSCKDIEGAMKFV HHHHHCCHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCEEEECHHHHHHHHHHH SDLLESDIIRERFWGEEGKDYSVDENGLFYLTNEQAEKKSDSSYHTAHMCSYSYFPRVEG HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHCCCCCCCHHHHHCCCCCCCCCC MLDDGINAFSMEFQQNEFFRNQPVDIQECFKAYGVENYVDMLGKNEAPGSWYPMYSYSDS HHHCCCCCEEEHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHCCCCCCCCEEECCCCCCC IPSTSECGKAKNNIVAVKKIWLPQVIMADDFGAAWDQYMEKYNACNPQIYFDYLQQKVNE CCCCHHHCCCCCCEEEEEHHCCCCEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCC N C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA