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The map label for this gene is xynZ [H]

Identifier: 238923419

GI number: 238923419

Start: 934446

End: 936326

Strand: Direct

Name: xynZ [H]

Synonym: EUBREC_1039

Alternate gene names: 238923419

Gene position: 934446-936326 (Clockwise)

Preceding gene: 238923418

Following gene: 238923420

Centisome position: 27.09

GC content: 41.57

Gene sequence:

>1881_bases
ATGGACAATAACAGATGCTCAGTCACACTTGAGGATGATGGAAGTGTTACCTTTTATATCTATGCGCCAAATGCCAATAA
AGTAGAAGTAGCCGGAATGGGAGGCTATTTCAGCTCAGAACGCATACAGTTAAAGCCTGATATGCAGGGTGGATTTTCGG
CAAACATTAAAGATTTCCACTGGGCAATGCATTATTATTTCTGGTATGTAGATGATGTCTGTATAACAAATCCTCATGCG
GCTATATCATATGGCTGTTTTGCTGCAATAAACACATTTGAAGTGCCAAAAGAGGGCGAGGATTTCTATTTTGTCAGGGA
TGTGCCGCATGGAACGGTAAGTCTGTGCAAATATACCTCACAGGTAAACGGTCACATAAAGGAGAGCTATGTGTATACTC
CACCCGGATATGAGAGTGGAGATGTAAGGTATCCTGTATTGTATTTACAGCATGGTGTCGGGGAGAATGAGACCGGATGG
GTATGGCAGGGTAAGATGAATTTCATCATGGACAATCTGATAGCAGACAAAAAATGTGTGCCGATGATCATAGTTGCAAG
CAGTGGCTACGCATTTAAGGATAACGAATACCCTGTATTTTTTCCGGGAGATTTTGACAGTGAGCTTGTAAATAGCATAA
TCCCTTATATAGAGGAAAATTTTAAGGTCAAAAAAGGAAGAAACAACCGTGCTGTGGCAGGACTTTCACTTGGTTCAGGA
CAGGCTACGGATATAGCGGCAAGACACCCGGAGCTTTTTTCAGCAGTTGGAGTATTTTCAGGTGTTGCAATACATCTCAT
GAAAAAAATCATCGACAGCCCATATCGGTTTGAAGCTGTCTTTATGTCGGCAGGAGATAAAGAAAAAGAGATACTGCTTG
GAATCAATGAGATGGTAAAAGAATTTTCACGACAGGGGAAAAACAGTACACCAAAAGTATATGAGGGCTATCATGAATGG
CATGTATGGAGAAAGAGCTTTAAGGATTTCGCACAGATGCTTTTTACATGGGATGACGCAGAACTTGATGATATTAATAA
AGCTGTCCCGGTCAGATCAAAGAATATTGATTTTACCACACCGGTACAGGCGGATGAGAGCATGGTATTTTTTGATCCGG
TGTACAGGCAGATACAGTTCGAAAATGACGAGGATGGAAAACCGGCTGGCAAATATCCGGATGTCATACATGGTATCCGT
GTGACGGAGGATAACAGCATTGAAGTAAATCTTTTTGCACCTGATGCAAAAAGCGTGAGCGTAGTTCTTGAAAATGGCAC
GGAGGAGCTTCTTTACAGATCAAAGAAAAATGATGGTTATTGGGAAAAAACAATAGGTAATCCGGCAGAGGGATTTAACT
ATGTGACATTTATGGTAAATGGAACACCTGTAGTAAACCCTGCGGCACCTGTAGGGTTCGGATATAACAGGGCTGTAAAC
TTTGCTGAGGTACCTGAGAGGAACTTTAGCTGGCATGAGCTTAAGAAAACAGAGCATGGTCAGATACATATCCATTATTC
GTGTGATGGAGACGGACAGGTCAGTATGAATTATGTTTATACACCAGCCGGTTATGGAGAGGATAATTGTGATACCGGCA
GAGTATGTGTGCTTGAGTGTGCTGCGGACGAAAGAAATTTTTGCTGGATACATCAGGGAAAGATAGCAAATATCATGGAT
AATCTGTCGGGTGAAGGCAGGATAAAAGGAATTATGATAATAATGGCAGACAGCACGATATCTGATGATATCATCGGGAA
CATAACAGCCATATACGGAATTAGGGACAGTGCACGGAAAGAATGGTTCAAAAAAGGAGATAATGAATCCTGGACATCAT
GCAGACACAGATTTTTAAATTTCATGTGCGGGATACAGTAA

Upstream 100 bases:

>100_bases
TGTTCGTTTACACTTATATATATCAATAAACGAATGGGGGGATTTTATTTTGGATGATTTAAAAAATGGTGCTTTGTATA
TAGGCACGATACCATCATCA

Downstream 100 bases:

>100_bases
AACAGCGACAAAAAGGAGAGAAAAATGGCAGGAGCATATAAGACAGGCAAATACAGAAATATATTCAAAGAGTATGGGTA
TCCGGAAGAAGAAATTCAAA

Product: putative esterase

Products: NA

Alternate protein names: Xylanase Z; 1,4-beta-D-xylan xylanohydrolase Z [H]

Number of amino acids: Translated: 626; Mature: 626

Protein sequence:

>626_residues
MDNNRCSVTLEDDGSVTFYIYAPNANKVEVAGMGGYFSSERIQLKPDMQGGFSANIKDFHWAMHYYFWYVDDVCITNPHA
AISYGCFAAINTFEVPKEGEDFYFVRDVPHGTVSLCKYTSQVNGHIKESYVYTPPGYESGDVRYPVLYLQHGVGENETGW
VWQGKMNFIMDNLIADKKCVPMIIVASSGYAFKDNEYPVFFPGDFDSELVNSIIPYIEENFKVKKGRNNRAVAGLSLGSG
QATDIAARHPELFSAVGVFSGVAIHLMKKIIDSPYRFEAVFMSAGDKEKEILLGINEMVKEFSRQGKNSTPKVYEGYHEW
HVWRKSFKDFAQMLFTWDDAELDDINKAVPVRSKNIDFTTPVQADESMVFFDPVYRQIQFENDEDGKPAGKYPDVIHGIR
VTEDNSIEVNLFAPDAKSVSVVLENGTEELLYRSKKNDGYWEKTIGNPAEGFNYVTFMVNGTPVVNPAAPVGFGYNRAVN
FAEVPERNFSWHELKKTEHGQIHIHYSCDGDGQVSMNYVYTPAGYGEDNCDTGRVCVLECAADERNFCWIHQGKIANIMD
NLSGEGRIKGIMIIMADSTISDDIIGNITAIYGIRDSARKEWFKKGDNESWTSCRHRFLNFMCGIQ

Sequences:

>Translated_626_residues
MDNNRCSVTLEDDGSVTFYIYAPNANKVEVAGMGGYFSSERIQLKPDMQGGFSANIKDFHWAMHYYFWYVDDVCITNPHA
AISYGCFAAINTFEVPKEGEDFYFVRDVPHGTVSLCKYTSQVNGHIKESYVYTPPGYESGDVRYPVLYLQHGVGENETGW
VWQGKMNFIMDNLIADKKCVPMIIVASSGYAFKDNEYPVFFPGDFDSELVNSIIPYIEENFKVKKGRNNRAVAGLSLGSG
QATDIAARHPELFSAVGVFSGVAIHLMKKIIDSPYRFEAVFMSAGDKEKEILLGINEMVKEFSRQGKNSTPKVYEGYHEW
HVWRKSFKDFAQMLFTWDDAELDDINKAVPVRSKNIDFTTPVQADESMVFFDPVYRQIQFENDEDGKPAGKYPDVIHGIR
VTEDNSIEVNLFAPDAKSVSVVLENGTEELLYRSKKNDGYWEKTIGNPAEGFNYVTFMVNGTPVVNPAAPVGFGYNRAVN
FAEVPERNFSWHELKKTEHGQIHIHYSCDGDGQVSMNYVYTPAGYGEDNCDTGRVCVLECAADERNFCWIHQGKIANIMD
NLSGEGRIKGIMIIMADSTISDDIIGNITAIYGIRDSARKEWFKKGDNESWTSCRHRFLNFMCGIQ
>Mature_626_residues
MDNNRCSVTLEDDGSVTFYIYAPNANKVEVAGMGGYFSSERIQLKPDMQGGFSANIKDFHWAMHYYFWYVDDVCITNPHA
AISYGCFAAINTFEVPKEGEDFYFVRDVPHGTVSLCKYTSQVNGHIKESYVYTPPGYESGDVRYPVLYLQHGVGENETGW
VWQGKMNFIMDNLIADKKCVPMIIVASSGYAFKDNEYPVFFPGDFDSELVNSIIPYIEENFKVKKGRNNRAVAGLSLGSG
QATDIAARHPELFSAVGVFSGVAIHLMKKIIDSPYRFEAVFMSAGDKEKEILLGINEMVKEFSRQGKNSTPKVYEGYHEW
HVWRKSFKDFAQMLFTWDDAELDDINKAVPVRSKNIDFTTPVQADESMVFFDPVYRQIQFENDEDGKPAGKYPDVIHGIR
VTEDNSIEVNLFAPDAKSVSVVLENGTEELLYRSKKNDGYWEKTIGNPAEGFNYVTFMVNGTPVVNPAAPVGFGYNRAVN
FAEVPERNFSWHELKKTEHGQIHIHYSCDGDGQVSMNYVYTPAGYGEDNCDTGRVCVLECAADERNFCWIHQGKIANIMD
NLSGEGRIKGIMIIMADSTISDDIIGNITAIYGIRDSARKEWFKKGDNESWTSCRHRFLNFMCGIQ

Specific function: Unknown

COG id: COG2382

COG function: function code P; Enterochelin esterase and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CBM6 (carbohydrate binding type-6) domain [H]

Homologues:

Organism=Escherichia coli, GI145693201, Length=353, Percent_Identity=30.3116147308782, Blast_Score=115, Evalue=7e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005084
- InterPro:   IPR016134
- InterPro:   IPR002105
- InterPro:   IPR006584
- InterPro:   IPR018242
- InterPro:   IPR018247
- InterPro:   IPR000801
- InterPro:   IPR008979
- InterPro:   IPR001000
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF03422 CBM_6; PF00404 Dockerin_1; PF00756 Esterase; PF00331 Glyco_hydro_10 [H]

EC number: =3.2.1.8 [H]

Molecular weight: Translated: 70701; Mature: 70701

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNNRCSVTLEDDGSVTFYIYAPNANKVEVAGMGGYFSSERIQLKPDMQGGFSANIKDFH
CCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCHHHH
WAMHYYFWYVDDVCITNPHAAISYGCFAAINTFEVPKEGEDFYFVRDVPHGTVSLCKYTS
EEEEEEEEEECCEEECCCCHHHHHHHHHEEEEEECCCCCCCEEEEEECCCCHHHHHHHHH
QVNGHIKESYVYTPPGYESGDVRYPVLYLQHGVGENETGWVWQGKMNFIMDNLIADKKCV
HHCCCEEECEEECCCCCCCCCEEEEEEEEEECCCCCCCCEEEECCHHHHHHHHHCCCCCC
PMIIVASSGYAFKDNEYPVFFPGDFDSELVNSIIPYIEENFKVKKGRNNRAVAGLSLGSG
EEEEEECCCCEEECCCEEEEECCCCCHHHHHHHHHHHHCCCEEECCCCCCEEEEEECCCC
QATDIAARHPELFSAVGVFSGVAIHLMKKIIDSPYRFEAVFMSAGDKEKEILLGINEMVK
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEECHHHHHH
EFSRQGKNSTPKVYEGYHEWHVWRKSFKDFAQMLFTWDDAELDDINKAVPVRSKNIDFTT
HHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHEECCCCCHHHCCCCCCCCCCCCCCCC
PVQADESMVFFDPVYRQIQFENDEDGKPAGKYPDVIHGIRVTEDNSIEVNLFAPDAKSVS
CCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCHHHCCEEEECCCCEEEEEECCCCCEEE
VVLENGTEELLYRSKKNDGYWEKTIGNPAEGFNYVTFMVNGTPVVNPAAPVGFGYNRAVN
EEEECCCHHHHEECCCCCCCEECCCCCCCCCCEEEEEEECCCEECCCCCCCCCCHHHCCC
FAEVPERNFSWHELKKTEHGQIHIHYSCDGDGQVSMNYVYTPAGYGEDNCDTGRVCVLEC
HHHCCCCCCCHHHHCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCEEEEEE
AADERNFCWIHQGKIANIMDNLSGEGRIKGIMIIMADSTISDDIIGNITAIYGIRDSARK
CCCCCCEEEEECCCHHHHHHCCCCCCEEEEEEEEEECCCCCCCHHCCEEEEEECCHHHHH
EWFKKGDNESWTSCRHRFLNFMCGIQ
HHHHCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDNNRCSVTLEDDGSVTFYIYAPNANKVEVAGMGGYFSSERIQLKPDMQGGFSANIKDFH
CCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCHHHH
WAMHYYFWYVDDVCITNPHAAISYGCFAAINTFEVPKEGEDFYFVRDVPHGTVSLCKYTS
EEEEEEEEEECCEEECCCCHHHHHHHHHEEEEEECCCCCCCEEEEEECCCCHHHHHHHHH
QVNGHIKESYVYTPPGYESGDVRYPVLYLQHGVGENETGWVWQGKMNFIMDNLIADKKCV
HHCCCEEECEEECCCCCCCCCEEEEEEEEEECCCCCCCCEEEECCHHHHHHHHHCCCCCC
PMIIVASSGYAFKDNEYPVFFPGDFDSELVNSIIPYIEENFKVKKGRNNRAVAGLSLGSG
EEEEEECCCCEEECCCEEEEECCCCCHHHHHHHHHHHHCCCEEECCCCCCEEEEEECCCC
QATDIAARHPELFSAVGVFSGVAIHLMKKIIDSPYRFEAVFMSAGDKEKEILLGINEMVK
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEECHHHHHH
EFSRQGKNSTPKVYEGYHEWHVWRKSFKDFAQMLFTWDDAELDDINKAVPVRSKNIDFTT
HHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHEECCCCCHHHCCCCCCCCCCCCCCCC
PVQADESMVFFDPVYRQIQFENDEDGKPAGKYPDVIHGIRVTEDNSIEVNLFAPDAKSVS
CCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCHHHCCEEEECCCCEEEEEECCCCCEEE
VVLENGTEELLYRSKKNDGYWEKTIGNPAEGFNYVTFMVNGTPVVNPAAPVGFGYNRAVN
EEEECCCHHHHEECCCCCCCEECCCCCCCCCCEEEEEEECCCEECCCCCCCCCCHHHCCC
FAEVPERNFSWHELKKTEHGQIHIHYSCDGDGQVSMNYVYTPAGYGEDNCDTGRVCVLEC
HHHCCCCCCCHHHHCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCEEEEEE
AADERNFCWIHQGKIANIMDNLSGEGRIKGIMIIMADSTISDDIIGNITAIYGIRDSARK
CCCCCCEEEEECCCHHHHHHCCCCCCEEEEEEEEEECCCCCCCHHCCEEEEEECCHHHHH
EWFKKGDNESWTSCRHRFLNFMCGIQ
HHHHCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3139632; 7664125 [H]