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The map label for this gene is yrxA [H]

Identifier: 238923416

GI number: 238923416

Start: 931220

End: 931783

Strand: Direct

Name: yrxA [H]

Synonym: EUBREC_1036

Alternate gene names: 238923416

Gene position: 931220-931783 (Clockwise)

Preceding gene: 238923415

Following gene: 238923418

Centisome position: 26.99

GC content: 46.63

Gene sequence:

>564_bases
ATGAACGGTGATGAGAGAAGAAAAAAAATAATAAATATTCTATCCTCGTCAAAGTCGCCTGTGGCGGGAGTTGCGCTTGC
AAAGGAGCTTGATGTGAGTCGTCAGGTGATTGTGCAGGACATAGCACTGCTTCGAGCAAACGGAGCCGCGATTTTTTCGA
CAAACAGAGGATATCTGATACAGGCGGATAAGCAGTATTCGAGAGTATTAAAGGTGGTTCACGAGGATGATGAAGTAGAG
GAGGAGCTTTCAACAATAGTTGATGCCGGAGGCCATGTGAAGGACGTATTTGTATACCACAAGGTCTACGGAGTGATCCG
CGCTAATATGGACATCAAGTCCAGACGTGATGTCAGAAATTACCTGGAGGAAATCCGCACAGGAAAGTCCAGCCTTCTTA
AAAATGTAACTTCAGGTTATCACTATCACACAATATGTGCGGAGAGTGAAGAGGTGCTTGATGCCATACAGGAGGAGCTT
AAGCAGAAGGGCTTCCTTGCAAAGCTGCAGGACTATGAGCCGGTGGATTTCTGGGGAGACAACGAGGACGAGGCAAAGGC
TTAA

Upstream 100 bases:

>100_bases
CTATTATGGATTTATCACTTAAAAATCTACACGCAGTATAGATTTTAGATTGCCGGTCGCACTATGCTGTGACAGTAATG
TTTTACAGAAAGGAACGAAA

Downstream 100 bases:

>100_bases
TTTTATCGTAAAGTTAAAGCGTAATATAATAATTGCCCGGGTGAAAGCCCGGGCTGTTTTTTGCTTTTTATTTAATTTCC
AGATTTTCACCTGTAAGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MNGDERRKKIINILSSSKSPVAGVALAKELDVSRQVIVQDIALLRANGAAIFSTNRGYLIQADKQYSRVLKVVHEDDEVE
EELSTIVDAGGHVKDVFVYHKVYGVIRANMDIKSRRDVRNYLEEIRTGKSSLLKNVTSGYHYHTICAESEEVLDAIQEEL
KQKGFLAKLQDYEPVDFWGDNEDEAKA

Sequences:

>Translated_187_residues
MNGDERRKKIINILSSSKSPVAGVALAKELDVSRQVIVQDIALLRANGAAIFSTNRGYLIQADKQYSRVLKVVHEDDEVE
EELSTIVDAGGHVKDVFVYHKVYGVIRANMDIKSRRDVRNYLEEIRTGKSSLLKNVTSGYHYHTICAESEEVLDAIQEEL
KQKGFLAKLQDYEPVDFWGDNEDEAKA
>Mature_187_residues
MNGDERRKKIINILSSSKSPVAGVALAKELDVSRQVIVQDIALLRANGAAIFSTNRGYLIQADKQYSRVLKVVHEDDEVE
EELSTIVDAGGHVKDVFVYHKVYGVIRANMDIKSRRDVRNYLEEIRTGKSSLLKNVTSGYHYHTICAESEEVLDAIQEEL
KQKGFLAKLQDYEPVDFWGDNEDEAKA

Specific function: Unknown

COG id: COG1827

COG function: function code R; Predicted small molecule binding protein (contains 3H domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004173
- InterPro:   IPR013196
- InterPro:   IPR011991
- ProDom:   PD469575 [H]

Pfam domain/function: PF02829 3H; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 21099; Mature: 21099

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGDERRKKIINILSSSKSPVAGVALAKELDVSRQVIVQDIALLRANGAAIFSTNRGYLI
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEE
QADKQYSRVLKVVHEDDEVEEELSTIVDAGGHVKDVFVYHKVYGVIRANMDIKSRRDVRN
ECCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
YLEEIRTGKSSLLKNVTSGYHYHTICAESEEVLDAIQEELKQKGFLAKLQDYEPVDFWGD
HHHHHHCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCC
NEDEAKA
CCCCCCC
>Mature Secondary Structure
MNGDERRKKIINILSSSKSPVAGVALAKELDVSRQVIVQDIALLRANGAAIFSTNRGYLI
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEE
QADKQYSRVLKVVHEDDEVEEELSTIVDAGGHVKDVFVYHKVYGVIRANMDIKSRRDVRN
ECCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
YLEEIRTGKSSLLKNVTSGYHYHTICAESEEVLDAIQEELKQKGFLAKLQDYEPVDFWGD
HHHHHHCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCC
NEDEAKA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8444804; 9384377 [H]