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The map label for this gene is walR [H]

Identifier: 238923307

GI number: 238923307

Start: 824737

End: 825393

Strand: Direct

Name: walR [H]

Synonym: EUBREC_0924

Alternate gene names: 238923307

Gene position: 824737-825393 (Clockwise)

Preceding gene: 238923306

Following gene: 238923308

Centisome position: 23.91

GC content: 40.64

Gene sequence:

>657_bases
ATGATGATAGAAATACTAATAGTAGAAGACGAAAAACCGATATCAGACCTCATCAGATTAAATCTCATGAAAGCAGGCTA
TAGCTGCACCTGTGCCTTTGATGGTATGGAGGCAGCAGATATTCTGGAGGAGAGAAATTTTGACCTGATAATACTTGATG
TAATGCTGCCGAAGTTAAACGGCTTTGAGCTTATGGAATACATAAAGCCGCTTGGCATACCTGTTATATTTCTCACAGCA
AAAGCCACTTTAGATGACAGGCTAAGAGGTCTCACGTCCGGTGCCGAGGACTATATGGTAAAGCCATTTGAGATTGTTGA
GCTTTTAGCCCGGGTAAATATAGTGCTAAGACGTTATAATAAGATGGAGCAGCAGCTCACCTTTAAGGATATAGCTATCG
ATACGAAAAACCAGAATGTATCAAAGGCAGGGAAGCATATAGAGCTTACACCAAAGGAATTTGAGCTGCTTGAGCTTTTG
ATGCGCAATAAAAATATCACACTTTTCAGAGAAAAAATATATGAAGAAATATGGGGAAGTGAGTACTCTGTCGAGTCGAG
GACTCTCGATCTTCACATACAGAGACTGCGCAAAAAGCTTGATATAGGAGACAGCCTTAAAACCGTATTTAAGGCAGGAT
ACAGGCTGGAAGAATAG

Upstream 100 bases:

>100_bases
TACAGGCTGAATATATAATCCTTAGGATTGACAGCAAAAGAAGAATATGCAAAGATTTATAAAGGATAATAGTTACGGAT
AATAAAGTTTTAGAAGGAAT

Downstream 100 bases:

>100_bases
AAAACTAAAGACCATTAAATATGGGTAAGCGTAATATACAAAAAGAGGGATAAATGAAATTCAGGTACAAGGTATTGTTC
ACAAACTTAATACTGCTTTC

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MMIEILIVEDEKPISDLIRLNLMKAGYSCTCAFDGMEAADILEERNFDLIILDVMLPKLNGFELMEYIKPLGIPVIFLTA
KATLDDRLRGLTSGAEDYMVKPFEIVELLARVNIVLRRYNKMEQQLTFKDIAIDTKNQNVSKAGKHIELTPKEFELLELL
MRNKNITLFREKIYEEIWGSEYSVESRTLDLHIQRLRKKLDIGDSLKTVFKAGYRLEE

Sequences:

>Translated_218_residues
MMIEILIVEDEKPISDLIRLNLMKAGYSCTCAFDGMEAADILEERNFDLIILDVMLPKLNGFELMEYIKPLGIPVIFLTA
KATLDDRLRGLTSGAEDYMVKPFEIVELLARVNIVLRRYNKMEQQLTFKDIAIDTKNQNVSKAGKHIELTPKEFELLELL
MRNKNITLFREKIYEEIWGSEYSVESRTLDLHIQRLRKKLDIGDSLKTVFKAGYRLEE
>Mature_218_residues
MMIEILIVEDEKPISDLIRLNLMKAGYSCTCAFDGMEAADILEERNFDLIILDVMLPKLNGFELMEYIKPLGIPVIFLTA
KATLDDRLRGLTSGAEDYMVKPFEIVELLARVNIVLRRYNKMEQQLTFKDIAIDTKNQNVSKAGKHIELTPKEFELLELL
MRNKNITLFREKIYEEIWGSEYSVESRTLDLHIQRLRKKLDIGDSLKTVFKAGYRLEE

Specific function: Member of the two-component regulatory system walK/walR that regulates genes involved in autolysis, biofilm formation and cell wall metabolism [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786784, Length=222, Percent_Identity=36.4864864864865, Blast_Score=150, Evalue=4e-38,
Organism=Escherichia coli, GI1786599, Length=225, Percent_Identity=37.3333333333333, Blast_Score=150, Evalue=8e-38,
Organism=Escherichia coli, GI87082012, Length=200, Percent_Identity=38, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1789402, Length=219, Percent_Identity=35.6164383561644, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI1790552, Length=218, Percent_Identity=35.3211009174312, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI1788394, Length=221, Percent_Identity=36.1990950226244, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1786911, Length=208, Percent_Identity=33.1730769230769, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI2367329, Length=227, Percent_Identity=35.6828193832599, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1790860, Length=201, Percent_Identity=33.3333333333333, Blast_Score=107, Evalue=4e-25,
Organism=Escherichia coli, GI1787375, Length=221, Percent_Identity=28.5067873303167, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI1789809, Length=225, Percent_Identity=29.3333333333333, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1787229, Length=226, Percent_Identity=30.9734513274336, Blast_Score=94, Evalue=7e-21,
Organism=Escherichia coli, GI1790863, Length=228, Percent_Identity=28.5087719298246, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI1790299, Length=123, Percent_Identity=31.7073170731707, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI145693157, Length=100, Percent_Identity=35, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI145693140, Length=231, Percent_Identity=28.1385281385281, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1790437, Length=125, Percent_Identity=28.8, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1787487, Length=103, Percent_Identity=33.9805825242718, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI1788550, Length=139, Percent_Identity=26.6187050359712, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25309; Mature: 25309

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIEILIVEDEKPISDLIRLNLMKAGYSCTCAFDGMEAADILEERNFDLIILDVMLPKLN
CEEEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCEEEEEECCCCCC
GFELMEYIKPLGIPVIFLTAKATLDDRLRGLTSGAEDYMVKPFEIVELLARVNIVLRRYN
CHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHH
KMEQQLTFKDIAIDTKNQNVSKAGKHIELTPKEFELLELLMRNKNITLFREKIYEEIWGS
HHHHHHHHHHEEEECCCCCHHHCCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
EYSVESRTLDLHIQRLRKKLDIGDSLKTVFKAGYRLEE
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MMIEILIVEDEKPISDLIRLNLMKAGYSCTCAFDGMEAADILEERNFDLIILDVMLPKLN
CEEEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCEEEEEECCCCCC
GFELMEYIKPLGIPVIFLTAKATLDDRLRGLTSGAEDYMVKPFEIVELLARVNIVLRRYN
CHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHH
KMEQQLTFKDIAIDTKNQNVSKAGKHIELTPKEFELLELLMRNKNITLFREKIYEEIWGS
HHHHHHHHHHEEEECCCCCHHHCCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
EYSVESRTLDLHIQRLRKKLDIGDSLKTVFKAGYRLEE
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA